RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 A0A087WZG4 1122 aa17.07■□□□□ 0.32
HLA-DOB-207ENST00000447394 ZPR1O75312 459 aa17.07■□□□□ 0.32
HLA-DOB-207ENST00000447394 HLFQ16534 295 aa17.07■□□□□ 0.32
HLA-DOB-207ENST00000447394 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
HLA-DOB-207ENST00000447394 PTGER2P43116 358 aa17.06■□□□□ 0.32
HLA-DOB-207ENST00000447394 NRXN2Q9P2S2 1712 aa17.05■□□□□ 0.32
HLA-DOB-207ENST00000447394 MAP3K15Q6ZN16 1313 aa17.05■□□□□ 0.32
HLA-DOB-207ENST00000447394 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
HLA-DOB-207ENST00000447394 KIF6Q6ZMV9 814 aa17.05■□□□□ 0.32
HLA-DOB-207ENST00000447394 BICDL1Q6ZP65 573 aa17.05■□□□□ 0.32
HLA-DOB-207ENST00000447394 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
HLA-DOB-207ENST00000447394 SLC16A10Q8TF71 515 aa17.05■□□□□ 0.32
HLA-DOB-207ENST00000447394 STK31Q9BXU1 1019 aa17.05■□□□□ 0.32
HLA-DOB-207ENST00000447394 HYPKQ9NX55 129 aa17.05■□□□□ 0.32
HLA-DOB-207ENST00000447394 DDR1Q08345 913 aa17.04■□□□□ 0.32
HLA-DOB-207ENST00000447394 TBC1D9BQ66K14 1250 aa17.04■□□□□ 0.32
HLA-DOB-207ENST00000447394 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
HLA-DOB-207ENST00000447394 ZNF428Q96B54 188 aa17.04■□□□□ 0.32
HLA-DOB-207ENST00000447394 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
HLA-DOB-207ENST00000447394 MMP10P09238 476 aa17.03■□□□□ 0.32
HLA-DOB-207ENST00000447394 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
HLA-DOB-207ENST00000447394 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
HLA-DOB-207ENST00000447394 NFIXQ14938 502 aa17.02■□□□□ 0.32
HLA-DOB-207ENST00000447394 MRPL50Q8N5N7 158 aaKnown RBP17.02■□□□□ 0.32
HLA-DOB-207ENST00000447394 KIF13BQ9NQT8 1826 aa17.02■□□□□ 0.31
HLA-DOB-207ENST00000447394 ADCY9O60503 1353 aa17.02■□□□□ 0.31
HLA-DOB-207ENST00000447394 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
HLA-DOB-207ENST00000447394 GPTP24298 496 aa17.01■□□□□ 0.31
HLA-DOB-207ENST00000447394 FLIIQ13045 1269 aa17.01■□□□□ 0.31
HLA-DOB-207ENST00000447394 TNRC6CQ9HCJ0 1690 aaKnown RBP17.01■□□□□ 0.31
HLA-DOB-207ENST00000447394 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
HLA-DOB-207ENST00000447394 NLGN1Q8N2Q7 840 aa17■□□□□ 0.31
HLA-DOB-207ENST00000447394 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
HLA-DOB-207ENST00000447394 ATP10DQ9P241 1426 aa17■□□□□ 0.31
HLA-DOB-207ENST00000447394 UBN2Q6ZU65 1347 aa16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 FAM177BA6PVY3 158 aa16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 ERVV-1B6SEH8 477 aa16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 POLRMTO00411 1230 aaKnown RBP16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 TM4SF1P30408 202 aa16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 GIGYF2Q6Y7W6 1299 aaKnown RBP16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 CARMIL3Q8ND23 1372 aa16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 COL11A2P13942 1736 aaPredicted RBP16.99■□□□□ 0.31
HLA-DOB-207ENST00000447394 LAMB2P55268 1798 aa16.98■□□□□ 0.31
HLA-DOB-207ENST00000447394 POLD1P28340 1107 aa16.98■□□□□ 0.31
HLA-DOB-207ENST00000447394 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
HLA-DOB-207ENST00000447394 CCDC24Q8N4L8 307 aa16.98■□□□□ 0.31
HLA-DOB-207ENST00000447394 NIP7Q9Y221 180 aaKnown RBP eCLIP16.98■□□□□ 0.31
HLA-DOB-207ENST00000447394 ZNF652Q9Y2D9 606 aa16.98■□□□□ 0.31
HLA-DOB-207ENST00000447394 MAP3K2Q9Y2U5 619 aa16.98■□□□□ 0.31
HLA-DOB-207ENST00000447394 DDX60Q8IY21 1712 aaKnown RBP16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 PI4KAP2A4QPH2 592 aa16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 F6X3S4 739 aa16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 ATP5J2-PTCD1G3V325 749 aa16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 BCAR3O75815 825 aa16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 CT47B1P0C2W7 299 aaPredicted RBP16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 FKBP5Q13451 457 aaPredicted RBP16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 RIC3Q7Z5B4 369 aa16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 PI4KAP1Q8N8J0 262 aa16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
HLA-DOB-207ENST00000447394 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
HLA-DOB-207ENST00000447394 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
HLA-DOB-207ENST00000447394 MYD88Q99836 296 aa16.96■□□□□ 0.31
HLA-DOB-207ENST00000447394 PARP3Q9Y6F1 533 aa16.96■□□□□ 0.31
HLA-DOB-207ENST00000447394 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
HLA-DOB-207ENST00000447394 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.3
HLA-DOB-207ENST00000447394 SERPINB2P05120 415 aa16.95■□□□□ 0.3
HLA-DOB-207ENST00000447394 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
HLA-DOB-207ENST00000447394 ZNF34Q8IZ26 560 aa16.95■□□□□ 0.3
HLA-DOB-207ENST00000447394 SETDB2Q96T68 719 aa16.95■□□□□ 0.3
HLA-DOB-207ENST00000447394 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
HLA-DOB-207ENST00000447394 TCIRG1Q13488 830 aa16.94■□□□□ 0.3
HLA-DOB-207ENST00000447394 PPP1R1BQ9UD71 204 aaPredicted RBP16.94■□□□□ 0.3
HLA-DOB-207ENST00000447394 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
HLA-DOB-207ENST00000447394 DLEC1Q9Y238 1755 aa16.94■□□□□ 0.3
HLA-DOB-207ENST00000447394 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
HLA-DOB-207ENST00000447394 SUSD4Q5VX71 490 aa16.93■□□□□ 0.3
HLA-DOB-207ENST00000447394 NLRP10Q86W26 655 aa16.93■□□□□ 0.3
HLA-DOB-207ENST00000447394 METTL22Q9BUU2 404 aaPredicted RBP16.93■□□□□ 0.3
HLA-DOB-207ENST00000447394 NOB1Q9ULX3 412 aaKnown RBP16.93■□□□□ 0.3
HLA-DOB-207ENST00000447394 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
HLA-DOB-207ENST00000447394 RGL2O15211 777 aa16.92■□□□□ 0.3
HLA-DOB-207ENST00000447394 IGKV5-2P06315 115 aa16.92■□□□□ 0.3
HLA-DOB-207ENST00000447394 CWF19L2Q2TBE0 894 aaKnown RBP16.92■□□□□ 0.3
HLA-DOB-207ENST00000447394 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
HLA-DOB-207ENST00000447394 NBPF5PQ86XG9 351 aaPredicted RBP16.92■□□□□ 0.3
HLA-DOB-207ENST00000447394 NUTM1Q86Y26 1132 aa16.92■□□□□ 0.3
HLA-DOB-207ENST00000447394 DNAAF4Q8WXU2 420 aa16.92■□□□□ 0.3
HLA-DOB-207ENST00000447394 ISCA1Q9BUE6 129 aa16.92■□□□□ 0.3
HLA-DOB-207ENST00000447394 FHDC1Q9C0D6 1143 aaPredicted RBP16.92■□□□□ 0.3
HLA-DOB-207ENST00000447394 NTSR2O95665 410 aa16.91■□□□□ 0.3
HLA-DOB-207ENST00000447394 SYNE4Q8N205 404 aa16.91■□□□□ 0.3
HLA-DOB-207ENST00000447394 JARID2Q92833 1246 aaPredicted RBP16.91■□□□□ 0.3
HLA-DOB-207ENST00000447394 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
HLA-DOB-207ENST00000447394 MYH3P11055 1940 aa16.9■□□□□ 0.3
HLA-DOB-207ENST00000447394 HSP90AB3PQ58FF7 597 aa16.9■□□□□ 0.3
HLA-DOB-207ENST00000447394 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms