RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 TAF7Q15545 349 aaPredicted RBP16.16■□□□□ 0.18
DDX56-206ENST00000446987 CSPP1Q1MSJ5 1256 aa16.16■□□□□ 0.18
DDX56-206ENST00000446987 CCDC94Q9BW85 323 aaPredicted RBP16.16■□□□□ 0.18
DDX56-206ENST00000446987 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
DDX56-206ENST00000446987 HEG1Q9ULI3 1381 aa16.16■□□□□ 0.18
DDX56-206ENST00000446987 SRCAPQ6ZRS2 3230 aa16.16■□□□□ 0.18
DDX56-206ENST00000446987 C20orf194Q5TEA3 1177 aa16.16■□□□□ 0.18
DDX56-206ENST00000446987 LETM1O95202 739 aaPredicted RBP16.15■□□□□ 0.18
DDX56-206ENST00000446987 MCM5P33992 734 aa16.15■□□□□ 0.18
DDX56-206ENST00000446987 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
DDX56-206ENST00000446987 GZF1Q9H116 711 aaPredicted RBP16.14■□□□□ 0.17
DDX56-206ENST00000446987 PNPLA7Q6ZV29 1317 aa16.14■□□□□ 0.17
DDX56-206ENST00000446987 CCDC27Q2M243 656 aa16.14■□□□□ 0.17
DDX56-206ENST00000446987 SMIM5Q71RC9 77 aa16.14■□□□□ 0.17
DDX56-206ENST00000446987 ANP32BQ92688 251 aaKnown RBP16.14■□□□□ 0.17
DDX56-206ENST00000446987 STK32BQ9NY57 414 aa16.14■□□□□ 0.17
DDX56-206ENST00000446987 NAP1L2Q9ULW6 460 aaPredicted RBP16.14■□□□□ 0.17
DDX56-206ENST00000446987 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
DDX56-206ENST00000446987 PRAMEF22A3QJZ6 481 aa16.13■□□□□ 0.17
DDX56-206ENST00000446987 ZSCAN20P17040 1043 aaPredicted RBP16.13■□□□□ 0.17
DDX56-206ENST00000446987 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
DDX56-206ENST00000446987 NBPF14Q5TI25 921 aa16.13■□□□□ 0.17
DDX56-206ENST00000446987 FAM13BQ9NYF5 915 aa16.13■□□□□ 0.17
DDX56-206ENST00000446987 CIZ1Q9ULV3 898 aaPredicted RBP16.13■□□□□ 0.17
DDX56-206ENST00000446987 ZNF853P0CG23 659 aa16.12■□□□□ 0.17
DDX56-206ENST00000446987 TTC5Q8N0Z6 440 aa16.12■□□□□ 0.17
DDX56-206ENST00000446987 CHL1O00533 1208 aa16.12■□□□□ 0.17
DDX56-206ENST00000446987 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
DDX56-206ENST00000446987 WWC1Q8IX03 1113 aa16.12■□□□□ 0.17
DDX56-206ENST00000446987 LRP5O75197 1615 aa16.11■□□□□ 0.17
DDX56-206ENST00000446987 EIF4A1P60842 406 aaKnown RBP16.11■□□□□ 0.17
DDX56-206ENST00000446987 FMNL2Q96PY5 1086 aa16.11■□□□□ 0.17
DDX56-206ENST00000446987 ZNF521Q96K83 1311 aa16.1■□□□□ 0.17
DDX56-206ENST00000446987 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
DDX56-206ENST00000446987 INTS5Q6P9B9 1019 aaKnown RBP16.1■□□□□ 0.17
DDX56-206ENST00000446987 NOL7Q9UMY1 257 aaKnown RBP16.1■□□□□ 0.17
DDX56-206ENST00000446987 UQCRHLA0A096LP55 91 aa16.1■□□□□ 0.17
DDX56-206ENST00000446987 UQCRHP07919 91 aa16.1■□□□□ 0.17
DDX56-206ENST00000446987 PPP4R3BQ5MIZ7 849 aa16.1■□□□□ 0.17
DDX56-206ENST00000446987 ARXQ96QS3 562 aa16.1■□□□□ 0.17
DDX56-206ENST00000446987 BABAM1Q9NWV8 329 aa16.1■□□□□ 0.17
DDX56-206ENST00000446987 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
DDX56-206ENST00000446987 DDIT3P35638 169 aa16.09■□□□□ 0.17
DDX56-206ENST00000446987 KRT24Q2M2I5 525 aa16.09■□□□□ 0.17
DDX56-206ENST00000446987 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
DDX56-206ENST00000446987 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
DDX56-206ENST00000446987 SEC24BO95487 1268 aa16.08■□□□□ 0.17
DDX56-206ENST00000446987 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.17
DDX56-206ENST00000446987 AK7Q96M32 723 aa16.08■□□□□ 0.17
DDX56-206ENST00000446987 CFAP44Q96MT7 982 aa16.08■□□□□ 0.17
DDX56-206ENST00000446987 MBIPQ9NS73 344 aa16.08■□□□□ 0.17
DDX56-206ENST00000446987 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.17
DDX56-206ENST00000446987 SCN7AQ01118 1682 aa16.08■□□□□ 0.16
DDX56-206ENST00000446987 GNPATO15228 680 aa16.08■□□□□ 0.16
DDX56-206ENST00000446987 SASS6Q6UVJ0 657 aa16.08■□□□□ 0.16
DDX56-206ENST00000446987 GBP4Q96PP9 640 aa16.08■□□□□ 0.16
DDX56-206ENST00000446987 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
DDX56-206ENST00000446987 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
DDX56-206ENST00000446987 BCORQ6W2J9 1755 aa16.07■□□□□ 0.16
DDX56-206ENST00000446987 GIGYF1O75420 1035 aaPredicted RBP16.07■□□□□ 0.16
DDX56-206ENST00000446987 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
DDX56-206ENST00000446987 ZHX1Q9UKY1 873 aaPredicted RBP16.07■□□□□ 0.16
DDX56-206ENST00000446987 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
DDX56-206ENST00000446987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.06■□□□□ 0.16
DDX56-206ENST00000446987 SSFA2P28290 1259 aa16.06■□□□□ 0.16
DDX56-206ENST00000446987 GAS2L3Q86XJ1 694 aa16.06■□□□□ 0.16
DDX56-206ENST00000446987 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
DDX56-206ENST00000446987 CCDC87Q9NVE4 849 aa16.06■□□□□ 0.16
DDX56-206ENST00000446987 R3HCC1Q9Y3T6 440 aaKnown RBP16.06■□□□□ 0.16
DDX56-206ENST00000446987 RPS6KA4O75676 772 aa16.05■□□□□ 0.16
DDX56-206ENST00000446987 SNRPA1P09661 255 aaKnown RBP16.05■□□□□ 0.16
DDX56-206ENST00000446987 NASPP49321 788 aaPredicted RBP16.05■□□□□ 0.16
DDX56-206ENST00000446987 PHF14O94880 888 aa16.05■□□□□ 0.16
DDX56-206ENST00000446987 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
DDX56-206ENST00000446987 IL16Q14005 1332 aa16.04■□□□□ 0.16
DDX56-206ENST00000446987 COL15A1P39059 1388 aa16.03■□□□□ 0.16
DDX56-206ENST00000446987 A1BGP04217 495 aa16.03■□□□□ 0.16
DDX56-206ENST00000446987 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
DDX56-206ENST00000446987 SGIP1Q9BQI5 828 aa16.03■□□□□ 0.16
DDX56-206ENST00000446987 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
DDX56-206ENST00000446987 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
DDX56-206ENST00000446987 GNAI1P63096 354 aa16.03■□□□□ 0.16
DDX56-206ENST00000446987 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
DDX56-206ENST00000446987 TRMT2AQ8IZ69 625 aaKnown RBP16.03■□□□□ 0.16
DDX56-206ENST00000446987 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
DDX56-206ENST00000446987 NBPF15Q8N660 670 aa16.03■□□□□ 0.16
DDX56-206ENST00000446987 PDLIM2Q96JY6 352 aa16.03■□□□□ 0.16
DDX56-206ENST00000446987 TMEM51Q9NW97 253 aa16.03■□□□□ 0.16
DDX56-206ENST00000446987 ZBTB7AO95365 584 aa16.02■□□□□ 0.16
DDX56-206ENST00000446987 CLEC17AQ6ZS10 378 aa16.02■□□□□ 0.16
DDX56-206ENST00000446987 WDR63Q8IWG1 891 aa16.02■□□□□ 0.16
DDX56-206ENST00000446987 TEX13AQ9BXU3 409 aaPredicted RBP16.02■□□□□ 0.16
DDX56-206ENST00000446987 RTCBQ9Y3I0 505 aaKnown RBP16.02■□□□□ 0.16
DDX56-206ENST00000446987 STARD3NLO95772 234 aa16.01■□□□□ 0.15
DDX56-206ENST00000446987 PTGER2P43116 358 aa16.01■□□□□ 0.15
DDX56-206ENST00000446987 RBM25P49756 843 aaKnown RBP16.01■□□□□ 0.15
DDX56-206ENST00000446987 EIF5P55010 431 aaKnown RBP16.01■□□□□ 0.15
DDX56-206ENST00000446987 ARHGEF1Q92888 912 aaKnown RBP16.01■□□□□ 0.15
DDX56-206ENST00000446987 SNX21Q969T3 373 aa16.01■□□□□ 0.15
DDX56-206ENST00000446987 HMGB2P26583 209 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms