RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 TRAPPC3LQ5T215 181 aa10.07□□□□□ -0.8
HDAC9-216ENST00000446646 NLGN1Q8N2Q7 840 aa10.07□□□□□ -0.8
HDAC9-216ENST00000446646 TMC1Q8TDI8 760 aa10.07□□□□□ -0.8
HDAC9-216ENST00000446646 RAPGEF4Q8WZA2 1011 aa10.07□□□□□ -0.8
HDAC9-216ENST00000446646 ATG3Q9NT62 314 aa10.07□□□□□ -0.8
HDAC9-216ENST00000446646 NFKBIEO00221 500 aa10.06□□□□□ -0.8
HDAC9-216ENST00000446646 TATP17735 454 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-216ENST00000446646 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
HDAC9-216ENST00000446646 PARP3Q9Y6F1 533 aa10.06□□□□□ -0.8
HDAC9-216ENST00000446646 EDC4Q6P2E9 1401 aaKnown RBP10.06□□□□□ -0.8
HDAC9-216ENST00000446646 KDRP35968 1356 aa10.05□□□□□ -0.8
HDAC9-216ENST00000446646 C2orf72A6NCS6 295 aa10.05□□□□□ -0.8
HDAC9-216ENST00000446646 LMNB1P20700 586 aa10.05□□□□□ -0.8
HDAC9-216ENST00000446646 AIDAQ96BJ3 306 aa10.05□□□□□ -0.8
HDAC9-216ENST00000446646 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
HDAC9-216ENST00000446646 CGNL1Q0VF96 1302 aa10.05□□□□□ -0.8
HDAC9-216ENST00000446646 PASKQ96RG2 1323 aa10.05□□□□□ -0.8
HDAC9-216ENST00000446646 HSP90AB2PQ58FF8 381 aa10.04□□□□□ -0.8
HDAC9-216ENST00000446646 TMC2Q8TDI7 906 aa10.04□□□□□ -0.8
HDAC9-216ENST00000446646 RTCBQ9Y3I0 505 aaKnown RBP10.04□□□□□ -0.8
HDAC9-216ENST00000446646 A0A0C4DFX4 3053 aa10.03□□□□□ -0.8
HDAC9-216ENST00000446646 TSKSQ9UJT2 592 aa10.03□□□□□ -0.8
HDAC9-216ENST00000446646 MKI67P46013 3256 aaKnown RBP10.03□□□□□ -0.8
HDAC9-216ENST00000446646 ZC3H4Q9UPT8 1303 aaKnown RBP10.03□□□□□ -0.8
HDAC9-216ENST00000446646 FAM205CA6NFA0 338 aa10.02□□□□□ -0.81
HDAC9-216ENST00000446646 POLRMTO00411 1230 aaKnown RBP10.02□□□□□ -0.81
HDAC9-216ENST00000446646 RFC4P35249 363 aa10.02□□□□□ -0.81
HDAC9-216ENST00000446646 HDGFL2Q7Z4V5 671 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-216ENST00000446646 TMOD3Q9NYL9 352 aa10.02□□□□□ -0.81
HDAC9-216ENST00000446646 SZT2Q5T011 3432 aa10.01□□□□□ -0.81
HDAC9-216ENST00000446646 GTPBP6O43824 516 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-216ENST00000446646 RPS6KA4O75676 772 aa10.01□□□□□ -0.81
HDAC9-216ENST00000446646 DDNO94850 711 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-216ENST00000446646 HOXB1P14653 301 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-216ENST00000446646 L3MBTL2Q969R5 705 aa10.01□□□□□ -0.81
HDAC9-216ENST00000446646 COG3Q96JB2 828 aa10.01□□□□□ -0.81
HDAC9-216ENST00000446646 TIAM2Q8IVF5 1701 aa10.01□□□□□ -0.81
HDAC9-216ENST00000446646 MYH14Q7Z406 1995 aaKnown RBP10.01□□□□□ -0.81
HDAC9-216ENST00000446646 ITGBL1O95965 494 aaPredicted RBP10□□□□□ -0.81
HDAC9-216ENST00000446646 VIRMAQ69YN4 1812 aaKnown RBP10□□□□□ -0.81
HDAC9-216ENST00000446646 HMGB2P26583 209 aaKnown RBP9.99□□□□□ -0.81
HDAC9-216ENST00000446646 TM4SF1P30408 202 aa9.99□□□□□ -0.81
HDAC9-216ENST00000446646 CNTNAP4Q9C0A0 1308 aa9.99□□□□□ -0.81
HDAC9-216ENST00000446646 USP42Q9H9J4 1324 aaKnown RBP9.99□□□□□ -0.81
HDAC9-216ENST00000446646 RTL1A6NKG5 1358 aa9.99□□□□□ -0.81
HDAC9-216ENST00000446646 ROCK2O75116 1388 aaKnown RBP9.99□□□□□ -0.81
HDAC9-216ENST00000446646 CARMIL3Q8ND23 1372 aa9.99□□□□□ -0.81
HDAC9-216ENST00000446646 TMEM88BA6NKF7 163 aa9.98□□□□□ -0.81
HDAC9-216ENST00000446646 FMR1Q06787 632 aaKnown RBP eCLIP9.98□□□□□ -0.81
HDAC9-216ENST00000446646 RC3H1Q5TC82 1133 aaKnown RBP9.98□□□□□ -0.81
HDAC9-216ENST00000446646 HS3ST6Q96QI5 342 aa9.98□□□□□ -0.81
HDAC9-216ENST00000446646 ZSWIM6Q9HCJ5 1215 aa9.98□□□□□ -0.81
HDAC9-216ENST00000446646 RASSF10A6NK89 507 aa9.97□□□□□ -0.81
HDAC9-216ENST00000446646 PHKG2P15735 406 aa9.97□□□□□ -0.81
HDAC9-216ENST00000446646 MCOLN1Q9GZU1 580 aa9.97□□□□□ -0.81
HDAC9-216ENST00000446646 GGNBP2Q9H3C7 697 aa9.97□□□□□ -0.81
HDAC9-216ENST00000446646 WDR33Q9C0J8 1336 aaKnown RBP9.97□□□□□ -0.81
HDAC9-216ENST00000446646 CCDC88AQ3V6T2 1871 aa9.97□□□□□ -0.81
HDAC9-216ENST00000446646 INSRP06213 1382 aa9.97□□□□□ -0.81
HDAC9-216ENST00000446646 CRKLP46109 303 aaKnown RBP9.96□□□□□ -0.82
HDAC9-216ENST00000446646 ERFEQ4G0M1 354 aa9.96□□□□□ -0.82
HDAC9-216ENST00000446646 TTLL6Q8N841 843 aa9.96□□□□□ -0.82
HDAC9-216ENST00000446646 TAF1DQ9H5J8 278 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-216ENST00000446646 TERF2IPQ9NYB0 399 aa9.96□□□□□ -0.82
HDAC9-216ENST00000446646 COL5A3P25940 1745 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-216ENST00000446646 FYB1O15117 783 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 C21orf2O43822 256 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 NFIXQ14938 502 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 DEFB115Q30KQ5 88 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 ARSIQ5FYB1 569 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 USPL1Q5W0Q7 1092 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 LDHDQ86WU2 507 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 C2CD5Q86YS7 1000 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 EMILIN1Q9Y6C2 1016 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 NCAPD2Q15021 1401 aa9.95□□□□□ -0.82
HDAC9-216ENST00000446646 SMG6Q86US8 1419 aaKnown RBP9.95□□□□□ -0.82
HDAC9-216ENST00000446646 ADAMTS7Q9UKP4 1686 aa9.94□□□□□ -0.82
HDAC9-216ENST00000446646 POTEB3A0JP26 581 aa9.94□□□□□ -0.82
HDAC9-216ENST00000446646 PTCD1O75127 700 aaKnown RBP9.94□□□□□ -0.82
HDAC9-216ENST00000446646 EAPPQ56P03 285 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-216ENST00000446646 MAP1SQ66K74 1059 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-216ENST00000446646 INTS5Q6P9B9 1019 aaKnown RBP9.94□□□□□ -0.82
HDAC9-216ENST00000446646 POTEBQ6S5H4 581 aa9.94□□□□□ -0.82
HDAC9-216ENST00000446646 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
HDAC9-216ENST00000446646 BCL2L12Q9HB09 334 aa9.94□□□□□ -0.82
HDAC9-216ENST00000446646 AOC2O75106 756 aa9.93□□□□□ -0.82
HDAC9-216ENST00000446646 SOX10P56693 466 aa9.93□□□□□ -0.82
HDAC9-216ENST00000446646 MAP2K1Q02750 393 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-216ENST00000446646 GRM1Q13255 1194 aa9.93□□□□□ -0.82
HDAC9-216ENST00000446646 CYP4F22Q6NT55 531 aa9.93□□□□□ -0.82
HDAC9-216ENST00000446646 SPG7Q9UQ90 795 aa9.93□□□□□ -0.82
HDAC9-216ENST00000446646 CUL9Q8IWT3 2517 aa9.92□□□□□ -0.82
HDAC9-216ENST00000446646 FLT4P35916 1363 aa9.92□□□□□ -0.82
HDAC9-216ENST00000446646 ZNF541Q9H0D2 1346 aa9.92□□□□□ -0.82
HDAC9-216ENST00000446646 BRCA2P51587 3418 aa9.92□□□□□ -0.82
HDAC9-216ENST00000446646 KHSRPQ92945 711 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC9-216ENST00000446646 SIN3AQ96ST3 1273 aa9.92□□□□□ -0.82
HDAC9-216ENST00000446646 EYA1Q99502 592 aa9.92□□□□□ -0.82
HDAC9-216ENST00000446646 LTBP1Q14766 1721 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms