RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ZC3H4Q9UPT8 1303 aaKnown RBP20.51■□□□□ 0.87
SEC13-213ENST00000445064 SRGNP10124 158 aa20.5■□□□□ 0.87
SEC13-213ENST00000445064 NBPF5PQ86XG9 351 aaPredicted RBP20.5■□□□□ 0.87
SEC13-213ENST00000445064 STYK1Q6J9G0 422 aa20.49■□□□□ 0.87
SEC13-213ENST00000445064 CNKSR1Q969H4 720 aa20.49■□□□□ 0.87
SEC13-213ENST00000445064 PLEKHF1Q96S99 279 aa20.49■□□□□ 0.87
SEC13-213ENST00000445064 ZNF652Q9Y2D9 606 aa20.49■□□□□ 0.87
SEC13-213ENST00000445064 BCORQ6W2J9 1755 aa20.49■□□□□ 0.87
SEC13-213ENST00000445064 TNRC6CQ9HCJ0 1690 aaKnown RBP20.48■□□□□ 0.87
SEC13-213ENST00000445064 COL11A2P13942 1736 aaPredicted RBP20.48■□□□□ 0.87
SEC13-213ENST00000445064 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
SEC13-213ENST00000445064 IFFO2Q5TF58 517 aa20.48■□□□□ 0.87
SEC13-213ENST00000445064 MASTLQ96GX5 879 aa20.48■□□□□ 0.87
SEC13-213ENST00000445064 FAM177BA6PVY3 158 aa20.47■□□□□ 0.87
SEC13-213ENST00000445064 HLFQ16534 295 aa20.47■□□□□ 0.87
SEC13-213ENST00000445064 ERFEQ4G0M1 354 aa20.47■□□□□ 0.87
SEC13-213ENST00000445064 DPY19L2Q6NUT2 758 aa20.47■□□□□ 0.87
SEC13-213ENST00000445064 PRPF40BQ6NWY9 871 aaKnown RBP20.47■□□□□ 0.87
SEC13-213ENST00000445064 NGEFQ8N5V2 710 aa20.47■□□□□ 0.87
SEC13-213ENST00000445064 NIP7Q9Y221 180 aaKnown RBP eCLIP20.47■□□□□ 0.87
SEC13-213ENST00000445064 TPTE2Q6XPS3 522 aa20.46■□□□□ 0.87
SEC13-213ENST00000445064 SMC1BQ8NDV3 1235 aa20.46■□□□□ 0.87
SEC13-213ENST00000445064 THUMPD2Q9BTF0 503 aaKnown RBP20.46■□□□□ 0.87
SEC13-213ENST00000445064 SLX4Q8IY92 1834 aa20.46■□□□□ 0.87
SEC13-213ENST00000445064 POTECB2RU33 542 aa20.45■□□□□ 0.86
SEC13-213ENST00000445064 NFE2L2Q16236 605 aa20.45■□□□□ 0.86
SEC13-213ENST00000445064 PNISRQ8TF01 805 aaKnown RBP20.45■□□□□ 0.86
SEC13-213ENST00000445064 TIAM2Q8IVF5 1701 aa20.44■□□□□ 0.86
SEC13-213ENST00000445064 WDR90Q96KV7 1748 aa20.44■□□□□ 0.86
SEC13-213ENST00000445064 TAOK3Q9H2K8 898 aa20.44■□□□□ 0.86
SEC13-213ENST00000445064 DLG5Q8TDM6 1919 aa20.44■□□□□ 0.86
SEC13-213ENST00000445064 FER1L6Q2WGJ9 1857 aa20.43■□□□□ 0.86
SEC13-213ENST00000445064 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
SEC13-213ENST00000445064 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
SEC13-213ENST00000445064 LTBP3Q9NS15 1303 aa20.43■□□□□ 0.86
SEC13-213ENST00000445064 CACNA1SQ13698 1873 aa20.43■□□□□ 0.86
SEC13-213ENST00000445064 NPR1P16066 1061 aa20.42■□□□□ 0.86
SEC13-213ENST00000445064 C7orf43Q8WVR3 580 aa20.42■□□□□ 0.86
SEC13-213ENST00000445064 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
SEC13-213ENST00000445064 KLRG2A4D1S0 409 aaPredicted RBP20.41■□□□□ 0.86
SEC13-213ENST00000445064 RGL2O15211 777 aa20.41■□□□□ 0.86
SEC13-213ENST00000445064 GTF2E1P29083 439 aaPredicted RBP20.41■□□□□ 0.86
SEC13-213ENST00000445064 SOGA3Q5TF21 947 aa20.41■□□□□ 0.86
SEC13-213ENST00000445064 KLRG1Q96E93 195 aa20.41■□□□□ 0.86
SEC13-213ENST00000445064 DDNO94850 711 aaPredicted RBP20.4■□□□□ 0.86
SEC13-213ENST00000445064 MYL6BP14649 208 aa20.4■□□□□ 0.86
SEC13-213ENST00000445064 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
SEC13-213ENST00000445064 DICER1Q9UPY3 1922 aaKnown RBP20.39■□□□□ 0.86
SEC13-213ENST00000445064 TTLL7Q6ZT98 887 aa20.39■□□□□ 0.85
SEC13-213ENST00000445064 ERVV-1B6SEH8 477 aa20.38■□□□□ 0.85
SEC13-213ENST00000445064 CCDC93Q567U6 631 aa20.38■□□□□ 0.85
SEC13-213ENST00000445064 OLFM4Q6UX06 510 aa20.38■□□□□ 0.85
SEC13-213ENST00000445064 KDM3BQ7LBC6 1761 aa20.38■□□□□ 0.85
SEC13-213ENST00000445064 LAMB4A4D0S4 1761 aa20.37■□□□□ 0.85
SEC13-213ENST00000445064 MAP3K15Q6ZN16 1313 aa20.37■□□□□ 0.85
SEC13-213ENST00000445064 NUTM1Q86Y26 1132 aa20.37■□□□□ 0.85
SEC13-213ENST00000445064 ARFGEF2Q9Y6D5 1785 aa20.36■□□□□ 0.85
SEC13-213ENST00000445064 ALDH1B1P30837 517 aa20.36■□□□□ 0.85
SEC13-213ENST00000445064 RIPK4P57078 832 aa20.36■□□□□ 0.85
SEC13-213ENST00000445064 KIF6Q6ZMV9 814 aa20.36■□□□□ 0.85
SEC13-213ENST00000445064 ZBTB3Q9H5J0 574 aa20.36■□□□□ 0.85
SEC13-213ENST00000445064 GPTP24298 496 aa20.35■□□□□ 0.85
SEC13-213ENST00000445064 FKBP4Q02790 459 aaKnown RBP eCLIP20.35■□□□□ 0.85
SEC13-213ENST00000445064 JMYQ8N9B5 988 aa20.35■□□□□ 0.85
SEC13-213ENST00000445064 NYXQ9GZU5 481 aa20.35■□□□□ 0.85
SEC13-213ENST00000445064 ZNF277Q9NRM2 450 aaPredicted RBP20.35■□□□□ 0.85
SEC13-213ENST00000445064 RALBP1Q15311 655 aa20.34■□□□□ 0.85
SEC13-213ENST00000445064 TSPYL4Q9UJ04 414 aa20.34■□□□□ 0.85
SEC13-213ENST00000445064 NUP98P52948 1817 aa20.33■□□□□ 0.85
SEC13-213ENST00000445064 POTEIP0CG38 1075 aa20.33■□□□□ 0.85
SEC13-213ENST00000445064 POTEJP0CG39 1038 aa20.33■□□□□ 0.85
SEC13-213ENST00000445064 DDX10Q13206 875 aaKnown RBP20.33■□□□□ 0.85
SEC13-213ENST00000445064 SUSD4Q5VX71 490 aa20.33■□□□□ 0.85
SEC13-213ENST00000445064 UBN2Q6ZU65 1347 aa20.32■□□□□ 0.84
SEC13-213ENST00000445064 EIF2S2P20042 333 aaKnown RBP20.32■□□□□ 0.84
SEC13-213ENST00000445064 RTKN2Q8IZC4 609 aa20.32■□□□□ 0.84
SEC13-213ENST00000445064 SYNE4Q8N205 404 aa20.32■□□□□ 0.84
SEC13-213ENST00000445064 ABCC12Q96J65 1359 aa20.32■□□□□ 0.84
SEC13-213ENST00000445064 TMPOP42166 694 aaKnown RBP20.31■□□□□ 0.84
SEC13-213ENST00000445064 CRY2Q49AN0 593 aa20.31■□□□□ 0.84
SEC13-213ENST00000445064 CHADLQ6NUI6 762 aa20.31■□□□□ 0.84
SEC13-213ENST00000445064 GIGYF2Q6Y7W6 1299 aaKnown RBP20.31■□□□□ 0.84
SEC13-213ENST00000445064 ZNF34Q8IZ26 560 aa20.31■□□□□ 0.84
SEC13-213ENST00000445064 PDIA6Q15084 440 aa20.3■□□□□ 0.84
SEC13-213ENST00000445064 NEUROD2Q15784 382 aa20.29■□□□□ 0.84
SEC13-213ENST00000445064 RPGRQ92834 1020 aaKnown RBP20.29■□□□□ 0.84
SEC13-213ENST00000445064 ERBB4Q15303 1308 aa20.28■□□□□ 0.84
SEC13-213ENST00000445064 ZNF541Q9H0D2 1346 aa20.28■□□□□ 0.84
SEC13-213ENST00000445064 ANXA1P04083 346 aa20.28■□□□□ 0.84
SEC13-213ENST00000445064 IARSP41252 1262 aaKnown RBP20.28■□□□□ 0.84
SEC13-213ENST00000445064 LRP10Q7Z4F1 713 aa20.28■□□□□ 0.84
SEC13-213ENST00000445064 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
SEC13-213ENST00000445064 NECTIN2Q92692 538 aa20.28■□□□□ 0.84
SEC13-213ENST00000445064 IQCA1LA6NCM1 817 aa20.27■□□□□ 0.84
SEC13-213ENST00000445064 NTSR2O95665 410 aa20.27■□□□□ 0.84
SEC13-213ENST00000445064 HOXA10P31260 410 aaPredicted RBP20.27■□□□□ 0.84
SEC13-213ENST00000445064 PROSER3Q2NL68 480 aa20.27■□□□□ 0.84
SEC13-213ENST00000445064 L3MBTL3Q96JM7 780 aaPredicted RBP20.27■□□□□ 0.84
SEC13-213ENST00000445064 TAF1DQ9H5J8 278 aaPredicted RBP20.27■□□□□ 0.84
SEC13-213ENST00000445064 BABAM1Q9NWV8 329 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms