RNA–Protein interactions for RNA: ENST00000444288.1

MED28P3-201, Transcript of mediator complex subunit 28 pseudogene 3, humanhuman

BASIC

Gene MED28P3, Length 531 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P3-201ENST00000444288 FTSJ3Q8IY81 847 aaKnown RBP7.05□□□□□ -1.28
MED28P3-201ENST00000444288 SPSB2Q99619 263 aa7.05□□□□□ -1.28
MED28P3-201ENST00000444288 PANK2Q9BZ23 570 aa7.05□□□□□ -1.28
MED28P3-201ENST00000444288 C14orf93Q9H972 538 aaKnown RBP7.05□□□□□ -1.28
MED28P3-201ENST00000444288 PRDM9Q9NQV7 894 aa7.05□□□□□ -1.28
MED28P3-201ENST00000444288 RRP7AQ9Y3A4 280 aaKnown RBP7.05□□□□□ -1.28
MED28P3-201ENST00000444288 PNPLA6Q8IY17 1366 aa7.05□□□□□ -1.28
MED28P3-201ENST00000444288 ARHGAP23Q9P227 1491 aa7.04□□□□□ -1.28
MED28P3-201ENST00000444288 EVC2Q86UK5 1308 aa7.04□□□□□ -1.28
MED28P3-201ENST00000444288 SPRYD7Q5W111 196 aa7.04□□□□□ -1.28
MED28P3-201ENST00000444288 ANKLE1Q8NAG6 615 aa7.04□□□□□ -1.28
MED28P3-201ENST00000444288 SMC4Q9NTJ3 1288 aa7.04□□□□□ -1.28
MED28P3-201ENST00000444288 SLIT1O75093 1534 aa7.04□□□□□ -1.28
MED28P3-201ENST00000444288 XRN1Q8IZH2 1706 aaKnown RBP7.04□□□□□ -1.28
MED28P3-201ENST00000444288 ERBB4Q15303 1308 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 TRAK2O60296 914 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 EIF5BO60841 1220 aaKnown RBP7.03□□□□□ -1.28
MED28P3-201ENST00000444288 MTHFSP49914 203 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 RAB3GAP1Q15042 981 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 MORN1Q5T089 497 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 ZNF697Q5TEC3 545 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 NUTM2DQ5VT03 806 aaPredicted RBP7.03□□□□□ -1.28
MED28P3-201ENST00000444288 ATF7IPQ6VMQ6 1270 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 TXNDC2Q86VQ3 553 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 PLEKHF1Q96S99 279 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 PNNQ9H307 717 aaKnown RBP7.03□□□□□ -1.28
MED28P3-201ENST00000444288 GRPEL1Q9HAV7 217 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 SLC27A5Q9Y2P5 690 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 USP54Q70EL1 1684 aa7.03□□□□□ -1.28
MED28P3-201ENST00000444288 ATP10DQ9P241 1426 aa7.02□□□□□ -1.29
MED28P3-201ENST00000444288 BRPF1P55201 1214 aaPredicted RBP7.02□□□□□ -1.29
MED28P3-201ENST00000444288 NUCB1Q02818 461 aa7.02□□□□□ -1.29
MED28P3-201ENST00000444288 BMP2KLQ5H9B9 411 aa7.02□□□□□ -1.29
MED28P3-201ENST00000444288 RNF19BQ6ZMZ0 732 aa7.02□□□□□ -1.29
MED28P3-201ENST00000444288 ITPRIPQ8IWB1 547 aa7.02□□□□□ -1.29
MED28P3-201ENST00000444288 HLA-CQ95604 372 aa7.02□□□□□ -1.29
MED28P3-201ENST00000444288 TMEM2Q9UHN6 1383 aa7.02□□□□□ -1.29
MED28P3-201ENST00000444288 ROBO1Q9Y6N7 1651 aa7.02□□□□□ -1.29
MED28P3-201ENST00000444288 ABCC4O15439 1325 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 CPSF1Q10570 1443 aaKnown RBP7.01□□□□□ -1.29
MED28P3-201ENST00000444288 CHD2O14647 1828 aaKnown RBP7.01□□□□□ -1.29
MED28P3-201ENST00000444288 CACNA1FO60840 1977 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 KIF24Q5T7B8 1368 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 RRP9O43818 475 aaKnown RBP7.01□□□□□ -1.29
MED28P3-201ENST00000444288 GCGRP47871 477 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 EXOSC9Q06265 439 aaKnown RBP7.01□□□□□ -1.29
MED28P3-201ENST00000444288 NEUROD2Q15784 382 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 ALDH1L2Q3SY69 923 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 CLEC17AQ6ZS10 378 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 FAM160A2Q8N612 972 aaPredicted RBP7.01□□□□□ -1.29
MED28P3-201ENST00000444288 SSH1Q8WYL5 1049 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 TSR2Q969E8 191 aaKnown RBP7.01□□□□□ -1.29
MED28P3-201ENST00000444288 ZNF428Q96B54 188 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 GBP4Q96PP9 640 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 SLC26A8Q96RN1 970 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 SLC12A5Q9H2X9 1139 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 ZBTB40Q9NUA8 1239 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 PEAK1Q9H792 1746 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 RGS12O14924 1447 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 RIMS2Q9UQ26 1411 aa7.01□□□□□ -1.29
MED28P3-201ENST00000444288 ESPNB1AK53 854 aa7□□□□□ -1.29
MED28P3-201ENST00000444288 TPM2P07951 284 aa7□□□□□ -1.29
MED28P3-201ENST00000444288 U2AF1L5P0DN76 240 aaPredicted RBP7□□□□□ -1.29
MED28P3-201ENST00000444288 TMPOP42166 694 aaKnown RBP7□□□□□ -1.29
MED28P3-201ENST00000444288 MDM2Q00987 491 aaPredicted RBP7□□□□□ -1.29
MED28P3-201ENST00000444288 U2AF1Q01081 240 aaKnown RBP eCLIP7□□□□□ -1.29
MED28P3-201ENST00000444288 FOXC1Q12948 553 aa7□□□□□ -1.29
MED28P3-201ENST00000444288 ZNF598Q86UK7 904 aaKnown RBP7□□□□□ -1.29
MED28P3-201ENST00000444288 TMEM57Q8N5G2 664 aa7□□□□□ -1.29
MED28P3-201ENST00000444288 THAP11Q96EK4 314 aa7□□□□□ -1.29
MED28P3-201ENST00000444288 NAP1L5Q96NT1 182 aaPredicted RBP7□□□□□ -1.29
MED28P3-201ENST00000444288 TRAK1Q9UPV9 953 aa7□□□□□ -1.29
MED28P3-201ENST00000444288 FCF1Q9Y324 198 aaKnown RBP7□□□□□ -1.29
MED28P3-201ENST00000444288 ATP6V1AP38606 617 aa6.99□□□□□ -1.29
MED28P3-201ENST00000444288 TNNT2P45379 298 aaPredicted RBP6.99□□□□□ -1.29
MED28P3-201ENST00000444288 CCDC173Q0VFZ6 552 aa6.99□□□□□ -1.29
MED28P3-201ENST00000444288 SKOR2Q2VWA4 1001 aaPredicted RBP6.99□□□□□ -1.29
MED28P3-201ENST00000444288 TNPO1Q92973 898 aaKnown RBP6.99□□□□□ -1.29
MED28P3-201ENST00000444288 KIF2CQ99661 725 aa6.99□□□□□ -1.29
MED28P3-201ENST00000444288 GZF1Q9H116 711 aaPredicted RBP6.99□□□□□ -1.29
MED28P3-201ENST00000444288 EID1Q9Y6B2 187 aa6.99□□□□□ -1.29
MED28P3-201ENST00000444288 EDC4Q6P2E9 1401 aaKnown RBP6.99□□□□□ -1.29
MED28P3-201ENST00000444288 COL16A1Q07092 1604 aaPredicted RBP6.98□□□□□ -1.29
MED28P3-201ENST00000444288 FAM187AA6NFU0 413 aa6.98□□□□□ -1.29
MED28P3-201ENST00000444288 K7ELQ4 463 aaPredicted RBP6.98□□□□□ -1.29
MED28P3-201ENST00000444288 HSP90AB1P08238 724 aaKnown RBP6.98□□□□□ -1.29
MED28P3-201ENST00000444288 GLIPR1L2Q4G1C9 344 aa6.98□□□□□ -1.29
MED28P3-201ENST00000444288 CHD1LQ86WJ1 897 aa6.98□□□□□ -1.29
MED28P3-201ENST00000444288 GCC1Q96CN9 775 aa6.98□□□□□ -1.29
MED28P3-201ENST00000444288 ARXQ96QS3 562 aa6.98□□□□□ -1.29
MED28P3-201ENST00000444288 PPP1R9BQ96SB3 815 aa6.98□□□□□ -1.29
MED28P3-201ENST00000444288 MARF1Q9Y4F3 1742 aaKnown RBP6.98□□□□□ -1.29
MED28P3-201ENST00000444288 LRP5O75197 1615 aa6.98□□□□□ -1.29
MED28P3-201ENST00000444288 LRP6O75581 1613 aa6.98□□□□□ -1.29
MED28P3-201ENST00000444288 IPO8O15397 1037 aaKnown RBP6.97□□□□□ -1.29
MED28P3-201ENST00000444288 PHLPP1O60346 1717 aa6.97□□□□□ -1.29
MED28P3-201ENST00000444288 GDF9O60383 454 aa6.97□□□□□ -1.29
MED28P3-201ENST00000444288 HSP90AA1P07900 732 aaKnown RBP6.97□□□□□ -1.29
MED28P3-201ENST00000444288 GUCA2AQ02747 115 aa6.97□□□□□ -1.29
MED28P3-201ENST00000444288 MAP2K5Q13163 448 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms