RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 ZC3H6P61129 1189 aaKnown RBP13.81□□□□□ -0.2
HCFC1-203ENST00000444191 ISM2Q6H9L7 571 aa13.81□□□□□ -0.2
HCFC1-203ENST00000444191 NCOA3Q9Y6Q9 1424 aa13.8□□□□□ -0.2
HCFC1-203ENST00000444191 HTATSF1O43719 755 aaKnown RBP13.8□□□□□ -0.2
HCFC1-203ENST00000444191 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
HCFC1-203ENST00000444191 CHST3Q7LGC8 479 aa13.8□□□□□ -0.2
HCFC1-203ENST00000444191 MCM5P33992 734 aa13.8□□□□□ -0.2
HCFC1-203ENST00000444191 LRMPQ12912 555 aa13.8□□□□□ -0.2
HCFC1-203ENST00000444191 CCDC73Q6ZRK6 1079 aa13.8□□□□□ -0.2
HCFC1-203ENST00000444191 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
HCFC1-203ENST00000444191 PNPLA6Q8IY17 1366 aa13.8□□□□□ -0.2
HCFC1-203ENST00000444191 ATP5J2-PTCD1G3V325 749 aa13.79□□□□□ -0.2
HCFC1-203ENST00000444191 PTCD1O75127 700 aaKnown RBP13.79□□□□□ -0.2
HCFC1-203ENST00000444191 HSPA4P34932 840 aa13.79□□□□□ -0.2
HCFC1-203ENST00000444191 NMIQ13287 307 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-203ENST00000444191 FAM177A1Q8N128 213 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-203ENST00000444191 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-203ENST00000444191 DDX58O95786 925 aaKnown RBP13.79□□□□□ -0.2
HCFC1-203ENST00000444191 PDCP20941 246 aa13.79□□□□□ -0.2
HCFC1-203ENST00000444191 ZNF165P49910 485 aa13.79□□□□□ -0.2
HCFC1-203ENST00000444191 CCAR2Q8N163 923 aaKnown RBP13.79□□□□□ -0.2
HCFC1-203ENST00000444191 CDC37L1Q7L3B6 337 aa13.79□□□□□ -0.2
HCFC1-203ENST00000444191 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
HCFC1-203ENST00000444191 HOMER1Q86YM7 354 aa13.79□□□□□ -0.2
HCFC1-203ENST00000444191 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
HCFC1-203ENST00000444191 BIN1O00499 593 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 SMC2O95347 1197 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 LIG1P18858 919 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
HCFC1-203ENST00000444191 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 PYCARDQ9ULZ3 195 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 TNNT1P13805 278 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 ME3Q16798 604 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 WASHC4Q2M389 1173 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 CCDC129Q6ZRS4 1044 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 CCDC112Q8NEF3 446 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 CLIP2Q9UDT6 1046 aa13.78□□□□□ -0.2
HCFC1-203ENST00000444191 ADGRB3O60242 1522 aa13.77□□□□□ -0.2
HCFC1-203ENST00000444191 KINO60870 393 aaKnown RBP13.77□□□□□ -0.2
HCFC1-203ENST00000444191 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.2
HCFC1-203ENST00000444191 U2AF2P26368 475 aaKnown RBP eCLIP13.77□□□□□ -0.21
HCFC1-203ENST00000444191 TYRO3Q06418 890 aa13.77□□□□□ -0.21
HCFC1-203ENST00000444191 ZSCAN31Q96LW9 406 aaPredicted RBP13.77□□□□□ -0.21
HCFC1-203ENST00000444191 MYD88Q99836 296 aa13.77□□□□□ -0.21
HCFC1-203ENST00000444191 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
HCFC1-203ENST00000444191 RAD50Q92878 1312 aa13.77□□□□□ -0.21
HCFC1-203ENST00000444191 ADGRB1O14514 1584 aa13.77□□□□□ -0.21
HCFC1-203ENST00000444191 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.21
HCFC1-203ENST00000444191 CREB3L3Q68CJ9 461 aa13.77□□□□□ -0.21
HCFC1-203ENST00000444191 BRF1Q92994 677 aa13.77□□□□□ -0.21
HCFC1-203ENST00000444191 PRAMEF22A3QJZ6 481 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 TAF7LQ5H9L4 462 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 PDLIM2Q96JY6 352 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.76□□□□□ -0.21
HCFC1-203ENST00000444191 NRBP1Q9UHY1 535 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 JAK2O60674 1132 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 APPP05067 770 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 ATP2B1P20020 1258 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 HDAC5Q9UQL6 1122 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 SETD1BQ9UPS6 1966 aaKnown RBP13.76□□□□□ -0.21
HCFC1-203ENST00000444191 ABCC3O15438 1527 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 NRDCO43847 1150 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 CUL4AQ13619 759 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
HCFC1-203ENST00000444191 PIBF1Q8WXW3 757 aa13.76□□□□□ -0.21
HCFC1-203ENST00000444191 CPLX1O14810 134 aa13.75□□□□□ -0.21
HCFC1-203ENST00000444191 FKBP4Q02790 459 aaKnown RBP eCLIP13.75□□□□□ -0.21
HCFC1-203ENST00000444191 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-203ENST00000444191 OSBPL3Q9H4L5 887 aa13.75□□□□□ -0.21
HCFC1-203ENST00000444191 SH2B1Q9NRF2 756 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-203ENST00000444191 SNRKQ9NRH2 765 aa13.75□□□□□ -0.21
HCFC1-203ENST00000444191 DBF4Q9UBU7 674 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-203ENST00000444191 IBTKQ9P2D0 1353 aaPredicted RBP13.74□□□□□ -0.21
HCFC1-203ENST00000444191 ATP10DQ9P241 1426 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 HOXC9P31274 260 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 HAND2P61296 217 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 TTC6Q86TZ1 520 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 TMX1Q9H3N1 280 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 TPCN1Q9ULQ1 816 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 LTKP29376 864 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 UVSSAQ2YD98 709 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 CLEC17AQ6ZS10 378 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 UBE3BQ7Z3V4 1068 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 ERC1Q8IUD2 1116 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
HCFC1-203ENST00000444191 EVI5LQ96CN4 794 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 MTMR6Q9Y217 621 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 UHRF1BP1LA0JNW5 1464 aa13.74□□□□□ -0.21
HCFC1-203ENST00000444191 POLR3DP05423 398 aaPredicted RBP13.73□□□□□ -0.21
HCFC1-203ENST00000444191 MYRIPQ8NFW9 859 aa13.73□□□□□ -0.21
HCFC1-203ENST00000444191 FAM200AQ8TCP9 573 aa13.73□□□□□ -0.21
HCFC1-203ENST00000444191 RAPGEF4Q8WZA2 1011 aa13.73□□□□□ -0.21
HCFC1-203ENST00000444191 MED14O60244 1454 aa13.73□□□□□ -0.21
HCFC1-203ENST00000444191 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
HCFC1-203ENST00000444191 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms