RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 PHACTR3Q96KR7 559 aa16■□□□□ 0.15
TNXB-202ENST00000442721 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
TNXB-202ENST00000442721 CACNA1SQ13698 1873 aa15.99■□□□□ 0.15
TNXB-202ENST00000442721 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
TNXB-202ENST00000442721 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
TNXB-202ENST00000442721 DZIP3Q86Y13 1208 aaKnown RBP15.99■□□□□ 0.15
TNXB-202ENST00000442721 RSPH6AQ9H0K4 717 aa15.99■□□□□ 0.15
TNXB-202ENST00000442721 HSPA1AP0DMV8 641 aaKnown RBP15.98■□□□□ 0.15
TNXB-202ENST00000442721 HSPA1BP0DMV9 641 aaKnown RBP15.98■□□□□ 0.15
TNXB-202ENST00000442721 PRKAR2BP31323 418 aa15.98■□□□□ 0.15
TNXB-202ENST00000442721 ST5P78524 1137 aa15.98■□□□□ 0.15
TNXB-202ENST00000442721 SOGA3Q5TF21 947 aa15.98■□□□□ 0.15
TNXB-202ENST00000442721 C7orf43Q8WVR3 580 aa15.98■□□□□ 0.15
TNXB-202ENST00000442721 MASTLQ96GX5 879 aa15.98■□□□□ 0.15
TNXB-202ENST00000442721 USP16Q9Y5T5 823 aa15.98■□□□□ 0.15
TNXB-202ENST00000442721 CHADLQ6NUI6 762 aa15.97■□□□□ 0.15
TNXB-202ENST00000442721 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
TNXB-202ENST00000442721 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
TNXB-202ENST00000442721 TNS4Q8IZW8 715 aa15.97■□□□□ 0.15
TNXB-202ENST00000442721 PRAMEF22A3QJZ6 481 aa15.96■□□□□ 0.15
TNXB-202ENST00000442721 DDNO94850 711 aaPredicted RBP15.96■□□□□ 0.15
TNXB-202ENST00000442721 POTEIP0CG38 1075 aa15.96■□□□□ 0.15
TNXB-202ENST00000442721 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
TNXB-202ENST00000442721 CREBZFQ9NS37 354 aa15.96■□□□□ 0.15
TNXB-202ENST00000442721 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
TNXB-202ENST00000442721 RGL2O15211 777 aa15.95■□□□□ 0.14
TNXB-202ENST00000442721 NPHP1O15259 732 aa15.95■□□□□ 0.14
TNXB-202ENST00000442721 PIP4K2AP48426 406 aaPredicted RBP15.95■□□□□ 0.14
TNXB-202ENST00000442721 L3MBTL3Q96JM7 780 aaPredicted RBP15.95■□□□□ 0.14
TNXB-202ENST00000442721 SCN4AP35499 1836 aa15.94■□□□□ 0.14
TNXB-202ENST00000442721 SNRPA1P09661 255 aaKnown RBP15.94■□□□□ 0.14
TNXB-202ENST00000442721 CNGB1Q14028 1251 aaPredicted RBP15.94■□□□□ 0.14
TNXB-202ENST00000442721 NBPF5PQ86XG9 351 aaPredicted RBP15.94■□□□□ 0.14
TNXB-202ENST00000442721 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
TNXB-202ENST00000442721 NBPF26B4DH59 902 aa15.93■□□□□ 0.14
TNXB-202ENST00000442721 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
TNXB-202ENST00000442721 NPR1P16066 1061 aa15.93■□□□□ 0.14
TNXB-202ENST00000442721 CCDC93Q567U6 631 aa15.93■□□□□ 0.14
TNXB-202ENST00000442721 NBPF10Q6P3W6 841 aaKnown RBP15.93■□□□□ 0.14
TNXB-202ENST00000442721 NBPF15Q8N660 670 aa15.93■□□□□ 0.14
TNXB-202ENST00000442721 CFAP53Q96M91 514 aa15.93■□□□□ 0.14
TNXB-202ENST00000442721 ZNF652Q9Y2D9 606 aa15.93■□□□□ 0.14
TNXB-202ENST00000442721 MCM10Q7L590 875 aa15.92■□□□□ 0.14
TNXB-202ENST00000442721 PASKQ96RG2 1323 aa15.92■□□□□ 0.14
TNXB-202ENST00000442721 IQCA1LA6NCM1 817 aa15.91■□□□□ 0.14
TNXB-202ENST00000442721 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
TNXB-202ENST00000442721 LDHDQ86WU2 507 aa15.91■□□□□ 0.14
TNXB-202ENST00000442721 TAF1DQ9H5J8 278 aaPredicted RBP15.91■□□□□ 0.14
TNXB-202ENST00000442721 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
TNXB-202ENST00000442721 CNTNAP1P78357 1384 aa15.9■□□□□ 0.14
TNXB-202ENST00000442721 HTATSF1O43719 755 aaKnown RBP15.9■□□□□ 0.14
TNXB-202ENST00000442721 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
TNXB-202ENST00000442721 MKRN1Q9UHC7 482 aaKnown RBP15.9■□□□□ 0.14
TNXB-202ENST00000442721 NIP7Q9Y221 180 aaKnown RBP eCLIP15.9■□□□□ 0.14
TNXB-202ENST00000442721 ZNF541Q9H0D2 1346 aa15.9■□□□□ 0.14
TNXB-202ENST00000442721 LAMB4A4D0S4 1761 aa15.9■□□□□ 0.14
TNXB-202ENST00000442721 ADAMTSL1Q8N6G6 1762 aa15.9■□□□□ 0.14
TNXB-202ENST00000442721 SNED1Q8TER0 1413 aa15.89■□□□□ 0.13
TNXB-202ENST00000442721 U2AF1L5P0DN76 240 aaPredicted RBP15.89■□□□□ 0.13
TNXB-202ENST00000442721 U2AF1Q01081 240 aaKnown RBP eCLIP15.89■□□□□ 0.13
TNXB-202ENST00000442721 DCTN1Q14203 1278 aa15.89■□□□□ 0.13
TNXB-202ENST00000442721 TPTE2Q6XPS3 522 aa15.89■□□□□ 0.13
TNXB-202ENST00000442721 ZNF277Q9NRM2 450 aaPredicted RBP15.89■□□□□ 0.13
TNXB-202ENST00000442721 SLC34A2O95436 690 aa15.88■□□□□ 0.13
TNXB-202ENST00000442721 PPP2R1AP30153 589 aa15.88■□□□□ 0.13
TNXB-202ENST00000442721 HLFQ16534 295 aa15.88■□□□□ 0.13
TNXB-202ENST00000442721 OLFM4Q6UX06 510 aa15.88■□□□□ 0.13
TNXB-202ENST00000442721 ITGBL1O95965 494 aaPredicted RBP15.87■□□□□ 0.13
TNXB-202ENST00000442721 TAF7Q15545 349 aaPredicted RBP15.87■□□□□ 0.13
TNXB-202ENST00000442721 RTKN2Q8IZC4 609 aa15.87■□□□□ 0.13
TNXB-202ENST00000442721 FZD9O00144 591 aa15.86■□□□□ 0.13
TNXB-202ENST00000442721 CRY2Q49AN0 593 aa15.86■□□□□ 0.13
TNXB-202ENST00000442721 HACL1Q9UJ83 578 aa15.86■□□□□ 0.13
TNXB-202ENST00000442721 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
TNXB-202ENST00000442721 FOXN1O15353 648 aa15.85■□□□□ 0.13
TNXB-202ENST00000442721 ALDH1B1P30837 517 aa15.85■□□□□ 0.13
TNXB-202ENST00000442721 IARSP41252 1262 aaKnown RBP15.85■□□□□ 0.13
TNXB-202ENST00000442721 ABCC12Q96J65 1359 aa15.85■□□□□ 0.13
TNXB-202ENST00000442721 RIC1Q4ADV7 1423 aa15.85■□□□□ 0.13
TNXB-202ENST00000442721 NUP98P52948 1817 aa15.84■□□□□ 0.13
TNXB-202ENST00000442721 TMEM88BA6NKF7 163 aa15.84■□□□□ 0.13
TNXB-202ENST00000442721 FAM177BA6PVY3 158 aa15.84■□□□□ 0.13
TNXB-202ENST00000442721 EPHX2P34913 555 aa15.84■□□□□ 0.13
TNXB-202ENST00000442721 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
TNXB-202ENST00000442721 SYNE4Q8N205 404 aa15.84■□□□□ 0.13
TNXB-202ENST00000442721 PSMD1Q99460 953 aa15.84■□□□□ 0.13
TNXB-202ENST00000442721 DLG5Q8TDM6 1919 aa15.84■□□□□ 0.13
TNXB-202ENST00000442721 ERVV-1B6SEH8 477 aa15.83■□□□□ 0.12
TNXB-202ENST00000442721 VEGFBP49765 207 aa15.83■□□□□ 0.12
TNXB-202ENST00000442721 EAPPQ56P03 285 aaPredicted RBP15.83■□□□□ 0.12
TNXB-202ENST00000442721 PRDM10Q9NQV6 1147 aa15.83■□□□□ 0.12
TNXB-202ENST00000442721 MIS18AQ9NYP9 233 aa15.83■□□□□ 0.12
TNXB-202ENST00000442721 IBTKQ9P2D0 1353 aaPredicted RBP15.83■□□□□ 0.12
TNXB-202ENST00000442721 COL4A5P29400 1685 aa15.83■□□□□ 0.12
TNXB-202ENST00000442721 PNMA8AQ86V59 439 aaPredicted RBP15.82■□□□□ 0.12
TNXB-202ENST00000442721 GPC2Q8N158 579 aa15.82■□□□□ 0.12
TNXB-202ENST00000442721 NYXQ9GZU5 481 aa15.82■□□□□ 0.12
TNXB-202ENST00000442721 RNF123Q5XPI4 1314 aa15.82■□□□□ 0.12
TNXB-202ENST00000442721 MAP3K15Q6ZN16 1313 aa15.82■□□□□ 0.12
TNXB-202ENST00000442721 GTF2E1P29083 439 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms