RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
NR1I3-211ENST00000442691 AFF2P51816 1311 aa11.48□□□□□ -0.57
NR1I3-211ENST00000442691 KDM2BQ8NHM5 1336 aa11.48□□□□□ -0.57
NR1I3-211ENST00000442691 DOT1LQ8TEK3 1739 aa11.47□□□□□ -0.57
NR1I3-211ENST00000442691 C5P01031 1676 aa11.47□□□□□ -0.57
NR1I3-211ENST00000442691 HAX1O00165 279 aa11.47□□□□□ -0.57
NR1I3-211ENST00000442691 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
NR1I3-211ENST00000442691 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-211ENST00000442691 NBR1Q14596 966 aa11.47□□□□□ -0.57
NR1I3-211ENST00000442691 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-211ENST00000442691 TRPC6Q9Y210 931 aa11.47□□□□□ -0.57
NR1I3-211ENST00000442691 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-211ENST00000442691 PPP1R37O75864 691 aa11.46□□□□□ -0.57
NR1I3-211ENST00000442691 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
NR1I3-211ENST00000442691 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-211ENST00000442691 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
NR1I3-211ENST00000442691 PIGBQ92521 554 aa11.46□□□□□ -0.57
NR1I3-211ENST00000442691 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.57
NR1I3-211ENST00000442691 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
NR1I3-211ENST00000442691 ITGB4P16144 1822 aa11.46□□□□□ -0.58
NR1I3-211ENST00000442691 PDIA6Q15084 440 aa11.45□□□□□ -0.58
NR1I3-211ENST00000442691 MARCH10Q8NA82 808 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-211ENST00000442691 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-211ENST00000442691 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-211ENST00000442691 TNNQ9UQP3 1299 aa11.45□□□□□ -0.58
NR1I3-211ENST00000442691 GNAI3P08754 354 aa11.44□□□□□ -0.58
NR1I3-211ENST00000442691 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
NR1I3-211ENST00000442691 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
NR1I3-211ENST00000442691 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-211ENST00000442691 WDR70Q9NW82 654 aa11.44□□□□□ -0.58
NR1I3-211ENST00000442691 NHSQ6T4R5 1651 aa11.43□□□□□ -0.58
NR1I3-211ENST00000442691 TCERG1O14776 1098 aaKnown RBP11.43□□□□□ -0.58
NR1I3-211ENST00000442691 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
NR1I3-211ENST00000442691 STARD3NLO95772 234 aa11.43□□□□□ -0.58
NR1I3-211ENST00000442691 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
NR1I3-211ENST00000442691 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
NR1I3-211ENST00000442691 G2E3Q7L622 706 aa11.43□□□□□ -0.58
NR1I3-211ENST00000442691 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
NR1I3-211ENST00000442691 FBXO41Q8TF61 875 aa11.43□□□□□ -0.58
NR1I3-211ENST00000442691 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
NR1I3-211ENST00000442691 ATG3Q9NT62 314 aa11.43□□□□□ -0.58
NR1I3-211ENST00000442691 ADCY9O60503 1353 aa11.42□□□□□ -0.58
NR1I3-211ENST00000442691 TIE1P35590 1138 aa11.42□□□□□ -0.58
NR1I3-211ENST00000442691 MKRN3Q13064 507 aaKnown RBP11.42□□□□□ -0.58
NR1I3-211ENST00000442691 RPAP2Q8IXW5 612 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-211ENST00000442691 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
NR1I3-211ENST00000442691 RREB1Q92766 1687 aa11.41□□□□□ -0.58
NR1I3-211ENST00000442691 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
NR1I3-211ENST00000442691 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
NR1I3-211ENST00000442691 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
NR1I3-211ENST00000442691 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
NR1I3-211ENST00000442691 COL15A1P39059 1388 aa11.41□□□□□ -0.58
NR1I3-211ENST00000442691 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
NR1I3-211ENST00000442691 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
NR1I3-211ENST00000442691 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
NR1I3-211ENST00000442691 QTRT2Q9H974 415 aaKnown RBP11.4□□□□□ -0.58
NR1I3-211ENST00000442691 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.58
NR1I3-211ENST00000442691 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
NR1I3-211ENST00000442691 TJP1Q07157 1748 aa11.4□□□□□ -0.58
NR1I3-211ENST00000442691 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
NR1I3-211ENST00000442691 PTCD1O75127 700 aaKnown RBP11.39□□□□□ -0.59
NR1I3-211ENST00000442691 NEXNQ0ZGT2 675 aa11.39□□□□□ -0.59
NR1I3-211ENST00000442691 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
NR1I3-211ENST00000442691 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
NR1I3-211ENST00000442691 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
NR1I3-211ENST00000442691 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
NR1I3-211ENST00000442691 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
NR1I3-211ENST00000442691 UTYO14607 1347 aa11.38□□□□□ -0.59
NR1I3-211ENST00000442691 TTLL13PA6NNM8 815 aa11.38□□□□□ -0.59
NR1I3-211ENST00000442691 F6X3S4 739 aa11.38□□□□□ -0.59
NR1I3-211ENST00000442691 HMMRO75330 724 aa11.38□□□□□ -0.59
NR1I3-211ENST00000442691 GNAI2P04899 355 aa11.38□□□□□ -0.59
NR1I3-211ENST00000442691 CLCN6P51797 869 aa11.38□□□□□ -0.59
NR1I3-211ENST00000442691 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
NR1I3-211ENST00000442691 PROSER3Q2NL68 480 aa11.38□□□□□ -0.59
NR1I3-211ENST00000442691 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
NR1I3-211ENST00000442691 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
NR1I3-211ENST00000442691 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-211ENST00000442691 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-211ENST00000442691 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-211ENST00000442691 CYP19A1P11511 503 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-211ENST00000442691 PRKCSHP14314 528 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-211ENST00000442691 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-211ENST00000442691 EVX2Q03828 476 aa11.37□□□□□ -0.59
NR1I3-211ENST00000442691 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
NR1I3-211ENST00000442691 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
NR1I3-211ENST00000442691 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
NR1I3-211ENST00000442691 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
NR1I3-211ENST00000442691 MAP3K2Q9Y2U5 619 aa11.37□□□□□ -0.59
NR1I3-211ENST00000442691 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
NR1I3-211ENST00000442691 A0A0G2JS52 829 aa11.36□□□□□ -0.59
NR1I3-211ENST00000442691 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
NR1I3-211ENST00000442691 IGHDP01880 384 aa11.36□□□□□ -0.59
NR1I3-211ENST00000442691 SIK1P57059 783 aa11.36□□□□□ -0.59
NR1I3-211ENST00000442691 MYT1Q01538 1121 aa11.36□□□□□ -0.59
NR1I3-211ENST00000442691 MTX1Q13505 466 aa11.36□□□□□ -0.59
NR1I3-211ENST00000442691 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
NR1I3-211ENST00000442691 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
NR1I3-211ENST00000442691 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
NR1I3-211ENST00000442691 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms