RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 APLP1P51693 650 aa15.54■□□□□ 0.08
TTC28-203ENST00000442232 CCDC24Q8N4L8 307 aa15.54■□□□□ 0.08
TTC28-203ENST00000442232 RBM46Q8TBY0 533 aaKnown RBP15.54■□□□□ 0.08
TTC28-203ENST00000442232 CNKSR1Q969H4 720 aa15.54■□□□□ 0.08
TTC28-203ENST00000442232 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
TTC28-203ENST00000442232 DICER1Q9UPY3 1922 aaKnown RBP15.53■□□□□ 0.08
TTC28-203ENST00000442232 FER1L6Q2WGJ9 1857 aa15.53■□□□□ 0.08
TTC28-203ENST00000442232 RGL2O15211 777 aa15.53■□□□□ 0.08
TTC28-203ENST00000442232 SOGA3Q5TF21 947 aa15.53■□□□□ 0.08
TTC28-203ENST00000442232 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
TTC28-203ENST00000442232 C21orf2O43822 256 aa15.52■□□□□ 0.08
TTC28-203ENST00000442232 STYK1Q6J9G0 422 aa15.52■□□□□ 0.08
TTC28-203ENST00000442232 MASTLQ96GX5 879 aa15.52■□□□□ 0.08
TTC28-203ENST00000442232 PLEKHF1Q96S99 279 aa15.52■□□□□ 0.08
TTC28-203ENST00000442232 RRAGCQ9HB90 399 aa15.52■□□□□ 0.08
TTC28-203ENST00000442232 NIP7Q9Y221 180 aaKnown RBP eCLIP15.52■□□□□ 0.08
TTC28-203ENST00000442232 GTF2E1P29083 439 aaPredicted RBP15.51■□□□□ 0.07
TTC28-203ENST00000442232 TPTE2Q6XPS3 522 aa15.51■□□□□ 0.07
TTC28-203ENST00000442232 KIF6Q6ZMV9 814 aa15.51■□□□□ 0.07
TTC28-203ENST00000442232 SLX4Q8IY92 1834 aa15.51■□□□□ 0.07
TTC28-203ENST00000442232 WDR90Q96KV7 1748 aa15.51■□□□□ 0.07
TTC28-203ENST00000442232 CEP350Q5VT06 3117 aa15.5■□□□□ 0.07
TTC28-203ENST00000442232 NUP98P52948 1817 aa15.5■□□□□ 0.07
TTC28-203ENST00000442232 NBPF26B4DH59 902 aa15.5■□□□□ 0.07
TTC28-203ENST00000442232 NFKBIEO00221 500 aa15.5■□□□□ 0.07
TTC28-203ENST00000442232 LMOD3Q0VAK6 560 aa15.5■□□□□ 0.07
TTC28-203ENST00000442232 FSTL1Q12841 308 aa15.5■□□□□ 0.07
TTC28-203ENST00000442232 NBPF10Q6P3W6 841 aaKnown RBP15.5■□□□□ 0.07
TTC28-203ENST00000442232 NBPF15Q8N660 670 aa15.5■□□□□ 0.07
TTC28-203ENST00000442232 GLTPD2A6NH11 291 aa15.49■□□□□ 0.07
TTC28-203ENST00000442232 FAM177BA6PVY3 158 aa15.49■□□□□ 0.07
TTC28-203ENST00000442232 SRGNP10124 158 aa15.49■□□□□ 0.07
TTC28-203ENST00000442232 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
TTC28-203ENST00000442232 PRPF40BQ6NWY9 871 aaKnown RBP15.49■□□□□ 0.07
TTC28-203ENST00000442232 NGEFQ8N5V2 710 aa15.49■□□□□ 0.07
TTC28-203ENST00000442232 THUMPD2Q9BTF0 503 aaKnown RBP15.49■□□□□ 0.07
TTC28-203ENST00000442232 TAOK3Q9H2K8 898 aa15.49■□□□□ 0.07
TTC28-203ENST00000442232 MYBBP1AQ9BQG0 1328 aaKnown RBP15.48■□□□□ 0.07
TTC28-203ENST00000442232 NPR1P16066 1061 aa15.48■□□□□ 0.07
TTC28-203ENST00000442232 EIF4A1P60842 406 aaKnown RBP15.48■□□□□ 0.07
TTC28-203ENST00000442232 ERFEQ4G0M1 354 aa15.48■□□□□ 0.07
TTC28-203ENST00000442232 SMC1BQ8NDV3 1235 aa15.48■□□□□ 0.07
TTC28-203ENST00000442232 NYXQ9GZU5 481 aa15.48■□□□□ 0.07
TTC28-203ENST00000442232 TSPYL4Q9UJ04 414 aa15.48■□□□□ 0.07
TTC28-203ENST00000442232 RRP7AQ9Y3A4 280 aaKnown RBP15.48■□□□□ 0.07
TTC28-203ENST00000442232 LTBP3Q9NS15 1303 aa15.47■□□□□ 0.07
TTC28-203ENST00000442232 MYL6BP14649 208 aa15.47■□□□□ 0.07
TTC28-203ENST00000442232 RIPK4P57078 832 aa15.47■□□□□ 0.07
TTC28-203ENST00000442232 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
TTC28-203ENST00000442232 WDR43Q15061 677 aaKnown RBP eCLIP15.47■□□□□ 0.07
TTC28-203ENST00000442232 ERBB4Q15303 1308 aa15.46■□□□□ 0.07
TTC28-203ENST00000442232 MAP3K15Q6ZN16 1313 aa15.46■□□□□ 0.07
TTC28-203ENST00000442232 ERVV-1B6SEH8 477 aa15.46■□□□□ 0.07
TTC28-203ENST00000442232 VEGFAP15692 232 aaPredicted RBP15.46■□□□□ 0.07
TTC28-203ENST00000442232 CCDC93Q567U6 631 aa15.46■□□□□ 0.07
TTC28-203ENST00000442232 PRELPP51888 382 aa15.45■□□□□ 0.06
TTC28-203ENST00000442232 HLFQ16534 295 aa15.45■□□□□ 0.06
TTC28-203ENST00000442232 ALDH1B1P30837 517 aa15.44■□□□□ 0.06
TTC28-203ENST00000442232 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
TTC28-203ENST00000442232 TMPOP42166 694 aaKnown RBP15.43■□□□□ 0.06
TTC28-203ENST00000442232 ZBTB3Q9H5J0 574 aa15.43■□□□□ 0.06
TTC28-203ENST00000442232 IBTKQ9P2D0 1353 aaPredicted RBP15.43■□□□□ 0.06
TTC28-203ENST00000442232 KLRG2A4D1S0 409 aaPredicted RBP15.42■□□□□ 0.06
TTC28-203ENST00000442232 EIF2S2P20042 333 aaKnown RBP15.42■□□□□ 0.06
TTC28-203ENST00000442232 TTLL7Q6ZT98 887 aa15.42■□□□□ 0.06
TTC28-203ENST00000442232 RPGRQ92834 1020 aaKnown RBP15.42■□□□□ 0.06
TTC28-203ENST00000442232 GPTP24298 496 aa15.41■□□□□ 0.06
TTC28-203ENST00000442232 FKBP4Q02790 459 aaKnown RBP eCLIP15.41■□□□□ 0.06
TTC28-203ENST00000442232 NEUROD2Q15784 382 aa15.41■□□□□ 0.06
TTC28-203ENST00000442232 PPP1R42Q7Z4L9 355 aa15.41■□□□□ 0.06
TTC28-203ENST00000442232 NUTM1Q86Y26 1132 aa15.41■□□□□ 0.06
TTC28-203ENST00000442232 RTKN2Q8IZC4 609 aa15.41■□□□□ 0.06
TTC28-203ENST00000442232 RUNDC1Q96C34 613 aa15.41■□□□□ 0.06
TTC28-203ENST00000442232 ANKRD36CQ5JPF3 1778 aa15.41■□□□□ 0.06
TTC28-203ENST00000442232 ABCC12Q96J65 1359 aa15.4■□□□□ 0.06
TTC28-203ENST00000442232 PARP10Q53GL7 1025 aa15.4■□□□□ 0.06
TTC28-203ENST00000442232 CCDC146Q8IYE0 955 aa15.4■□□□□ 0.06
TTC28-203ENST00000442232 RIC1Q4ADV7 1423 aa15.4■□□□□ 0.06
TTC28-203ENST00000442232 SCN4AP35499 1836 aa15.39■□□□□ 0.05
TTC28-203ENST00000442232 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
TTC28-203ENST00000442232 LAS1LQ9Y4W2 734 aaKnown RBP15.39■□□□□ 0.05
TTC28-203ENST00000442232 IQCA1LA6NCM1 817 aa15.38■□□□□ 0.05
TTC28-203ENST00000442232 C7orf43Q8WVR3 580 aa15.38■□□□□ 0.05
TTC28-203ENST00000442232 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
TTC28-203ENST00000442232 TMX4Q9H1E5 349 aaPredicted RBP15.38■□□□□ 0.05
TTC28-203ENST00000442232 ZNF277Q9NRM2 450 aaPredicted RBP15.38■□□□□ 0.05
TTC28-203ENST00000442232 UBN2Q6ZU65 1347 aa15.38■□□□□ 0.05
TTC28-203ENST00000442232 CRY2Q49AN0 593 aa15.37■□□□□ 0.05
TTC28-203ENST00000442232 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
TTC28-203ENST00000442232 CC2D2BQ6DHV5 1058 aa15.37■□□□□ 0.05
TTC28-203ENST00000442232 KLRG1Q96E93 195 aa15.37■□□□□ 0.05
TTC28-203ENST00000442232 DDNO94850 711 aaPredicted RBP15.36■□□□□ 0.05
TTC28-203ENST00000442232 HTRA3P83110 453 aa15.36■□□□□ 0.05
TTC28-203ENST00000442232 SUSD4Q5VX71 490 aa15.36■□□□□ 0.05
TTC28-203ENST00000442232 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
TTC28-203ENST00000442232 DNAJC5GQ8N7S2 189 aa15.36■□□□□ 0.05
TTC28-203ENST00000442232 NECTIN2Q92692 538 aa15.36■□□□□ 0.05
TTC28-203ENST00000442232 RNF123Q5XPI4 1314 aa15.36■□□□□ 0.05
TTC28-203ENST00000442232 NTSR2O95665 410 aa15.35■□□□□ 0.05
TTC28-203ENST00000442232 IARSP41252 1262 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms