RNA–Protein interactions for RNA: ENST00000442034.5

RAB3GAP1-203, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-203ENST00000442034 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.98□□□□□ -0.652e-8■■■■■ 39.5
RAB3GAP1-203ENST00000442034 MAP3K5Q99683 1374 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 SGSM2O43147 1006 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 HSPA4P34932 840 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 SBNO1A3KN83 1393 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 DHX16O60231 1041 aaKnown RBP10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 ALDH1L1O75891 902 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 ME1P48163 572 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 DNM1Q05193 864 aaKnown RBP10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 VPS53Q5VIR6 699 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 MPRIPQ6WCQ1 1025 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 TTC12Q9H892 705 aaPredicted RBP10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 CPSF1Q10570 1443 aaKnown RBP10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 ABCA9Q8IUA7 1624 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 MYL6BP14649 208 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 TRIM29Q14134 588 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 HMG20BQ9P0W2 317 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 NLRP1Q9C000 1473 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 YEATS2Q9ULM3 1422 aa10.97□□□□□ -0.65
RAB3GAP1-203ENST00000442034 RAD50Q92878 1312 aa10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 TFIP11Q9UBB9 837 aaKnown RBP10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 RBM8AQ9Y5S9 174 aaKnown RBP10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 ARHGEF10O15013 1369 aa10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 CAVIN2O95810 425 aa10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 ANXA1P04083 346 aa10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 WASHC4Q2M389 1173 aa10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 NECAB1Q8N987 351 aa10.96□□□□□ -0.65
RAB3GAP1-203ENST00000442034 KDM4AO75164 1064 aa10.96□□□□□ -0.66
RAB3GAP1-203ENST00000442034 DHX8Q14562 1220 aaKnown RBP10.96□□□□□ -0.66
RAB3GAP1-203ENST00000442034 STK38Q15208 465 aa10.96□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CEP57L1Q8IYX8 460 aa10.96□□□□□ -0.66
RAB3GAP1-203ENST00000442034 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.66
RAB3GAP1-203ENST00000442034 DDX11Q96FC9 970 aa10.96□□□□□ -0.66
RAB3GAP1-203ENST00000442034 PALD1Q9ULE6 856 aa10.96□□□□□ -0.66
RAB3GAP1-203ENST00000442034 SNX14Q9Y5W7 946 aa10.96□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CUL4AQ13619 759 aa10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 PHAXQ9H814 394 aaKnown RBP10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 STAP2Q9UGK3 403 aa10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 UBAP1LF5GYI3 381 aa10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 TATP17735 454 aaPredicted RBP10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 DDIT3P35638 169 aa10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 HOOK1Q9UJC3 728 aaKnown RBP10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 VWDEQ8N2E2 1590 aa10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 LRRC7Q96NW7 1537 aa10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CTAGE5O15320 804 aa10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 U3KPZ7 1027 aaPredicted RBP10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 ZNF165P49910 485 aa10.95□□□□□ -0.66
RAB3GAP1-203ENST00000442034 ADGRB1O14514 1584 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 ERBB4Q15303 1308 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 APPP05067 770 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 HMGB1P09429 215 aaKnown RBP10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 SSH3Q8TE77 659 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 USP44Q9H0E7 712 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 NCOA3Q9Y6Q9 1424 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 MYOM1P52179 1685 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 SMC2O95347 1197 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CEBPAP49715 358 aaPredicted RBP10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 KSR2Q6VAB6 950 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 HOXC9P31274 260 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 FILIP1Q7Z7B0 1213 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 DEPDC5O75140 1603 aa10.94□□□□□ -0.66
RAB3GAP1-203ENST00000442034 HOXB7P09629 217 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 SF3B2Q13435 895 aaKnown RBP10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 RUFY3Q7L099 469 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CLIP2Q9UDT6 1046 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 FMNL2Q96PY5 1086 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 ANO10Q9NW15 660 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 RGS12O14924 1447 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 NEMFO60524 1076 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 PIBF1Q8WXW3 757 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CHAMP1Q96JM3 812 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 NEK1Q96PY6 1258 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 ZSCAN16Q9H4T2 348 aaPredicted RBP10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 ARGLU1Q9NWB6 273 aaPredicted RBP10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 NPHP3Q7Z494 1330 aa10.93□□□□□ -0.66
RAB3GAP1-203ENST00000442034 GRM8O00222 908 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 LINS1Q8NG48 757 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 DACT1Q9NYF0 836 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 METP08581 1390 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CCP110O43303 1012 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 TNNT1P13805 278 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 AKAP4Q5JQC9 854 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 MNS1Q8NEH6 495 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CTNNA3Q9UI47 895 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CCDC171Q6TFL3 1326 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CPA1P15085 419 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 EVA1CP58658 441 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 OLFM4Q6UX06 510 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 MYD88Q99836 296 aa10.92□□□□□ -0.66
RAB3GAP1-203ENST00000442034 TYRO3Q06418 890 aa10.91□□□□□ -0.66
RAB3GAP1-203ENST00000442034 CCDC158Q5M9N0 1113 aa10.91□□□□□ -0.66
RAB3GAP1-203ENST00000442034 NFXL1Q6ZNB6 911 aa10.91□□□□□ -0.66
RAB3GAP1-203ENST00000442034 JMYQ8N9B5 988 aa10.91□□□□□ -0.66
RAB3GAP1-203ENST00000442034 PA2G4Q9UQ80 394 aaKnown RBP10.91□□□□□ -0.66
RAB3GAP1-203ENST00000442034 NUTM2BA6NNL0 878 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1307.1 ms