RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 PDGFDQ9GZP0 370 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC12-210ENST00000441983 DDX58O95786 925 aaKnown RBP19.38■□□□□ 0.69
TRAPPC12-210ENST00000441983 COPS6Q7L5N1 327 aa19.38■□□□□ 0.69
TRAPPC12-210ENST00000441983 N4BP2Q86UW6 1770 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC12-210ENST00000441983 XAGE3Q8WTP9 111 aa19.38■□□□□ 0.69
TRAPPC12-210ENST00000441983 SPON1Q9HCB6 807 aa19.38■□□□□ 0.69
TRAPPC12-210ENST00000441983 TBC1D2BQ9UPU7 963 aa19.38■□□□□ 0.69
TRAPPC12-210ENST00000441983 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
TRAPPC12-210ENST00000441983 HSP90AB3PQ58FF7 597 aa19.37■□□□□ 0.69
TRAPPC12-210ENST00000441983 PLBD2Q8NHP8 589 aa19.37■□□□□ 0.69
TRAPPC12-210ENST00000441983 SRP68Q9UHB9 627 aaKnown RBP19.37■□□□□ 0.69
TRAPPC12-210ENST00000441983 ANXA1P04083 346 aa19.36■□□□□ 0.69
TRAPPC12-210ENST00000441983 POLD1P28340 1107 aa19.36■□□□□ 0.69
TRAPPC12-210ENST00000441983 GIGYF2Q6Y7W6 1299 aaKnown RBP19.36■□□□□ 0.69
TRAPPC12-210ENST00000441983 SMIM5Q71RC9 77 aa19.36■□□□□ 0.69
TRAPPC12-210ENST00000441983 BCL2L12Q9HB09 334 aa19.36■□□□□ 0.69
TRAPPC12-210ENST00000441983 AFDNP55196 1824 aaKnown RBP19.36■□□□□ 0.69
TRAPPC12-210ENST00000441983 KIF13BQ9NQT8 1826 aa19.36■□□□□ 0.69
TRAPPC12-210ENST00000441983 CARMIL3Q8ND23 1372 aa19.35■□□□□ 0.69
TRAPPC12-210ENST00000441983 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC12-210ENST00000441983 PTPRCP08575 1304 aa19.35■□□□□ 0.69
TRAPPC12-210ENST00000441983 ZBTB7AO95365 584 aa19.35■□□□□ 0.69
TRAPPC12-210ENST00000441983 FLIIQ13045 1269 aa19.35■□□□□ 0.69
TRAPPC12-210ENST00000441983 TTLL7Q6ZT98 887 aa19.35■□□□□ 0.69
TRAPPC12-210ENST00000441983 ANKRD13DQ6ZTN6 518 aa19.35■□□□□ 0.69
TRAPPC12-210ENST00000441983 SGIP1Q9BQI5 828 aa19.35■□□□□ 0.69
TRAPPC12-210ENST00000441983 FKBP8Q14318 412 aa19.34■□□□□ 0.69
TRAPPC12-210ENST00000441983 YTHDC1Q96MU7 727 aaKnown RBP19.34■□□□□ 0.69
TRAPPC12-210ENST00000441983 PHAXQ9H814 394 aaKnown RBP19.34■□□□□ 0.69
TRAPPC12-210ENST00000441983 PXDNLA1KZ92 1463 aa19.34■□□□□ 0.69
TRAPPC12-210ENST00000441983 KIF16BQ96L93 1317 aa19.33■□□□□ 0.69
TRAPPC12-210ENST00000441983 TM4SF1P30408 202 aa19.33■□□□□ 0.68
TRAPPC12-210ENST00000441983 RARSP54136 660 aaKnown RBP19.33■□□□□ 0.68
TRAPPC12-210ENST00000441983 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.68
TRAPPC12-210ENST00000441983 ARXQ96QS3 562 aa19.33■□□□□ 0.68
TRAPPC12-210ENST00000441983 PTGER2P43116 358 aa19.32■□□□□ 0.68
TRAPPC12-210ENST00000441983 AIMP1Q12904 312 aaKnown RBP19.32■□□□□ 0.68
TRAPPC12-210ENST00000441983 MRPL50Q8N5N7 158 aaKnown RBP19.32■□□□□ 0.68
TRAPPC12-210ENST00000441983 ZBTB3Q9H5J0 574 aa19.32■□□□□ 0.68
TRAPPC12-210ENST00000441983 SMC4Q9NTJ3 1288 aa19.32■□□□□ 0.68
TRAPPC12-210ENST00000441983 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
TRAPPC12-210ENST00000441983 PARP10Q53GL7 1025 aa19.31■□□□□ 0.68
TRAPPC12-210ENST00000441983 KSR2Q6VAB6 950 aa19.31■□□□□ 0.68
TRAPPC12-210ENST00000441983 ADCY9O60503 1353 aa19.31■□□□□ 0.68
TRAPPC12-210ENST00000441983 LAMB2P55268 1798 aa19.3■□□□□ 0.68
TRAPPC12-210ENST00000441983 MMP10P09238 476 aa19.3■□□□□ 0.68
TRAPPC12-210ENST00000441983 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC12-210ENST00000441983 NFIXQ14938 502 aa19.3■□□□□ 0.68
TRAPPC12-210ENST00000441983 HLFQ16534 295 aa19.3■□□□□ 0.68
TRAPPC12-210ENST00000441983 MSL1Q68DK7 614 aa19.3■□□□□ 0.68
TRAPPC12-210ENST00000441983 RIC3Q7Z5B4 369 aa19.3■□□□□ 0.68
TRAPPC12-210ENST00000441983 SETDB2Q96T68 719 aa19.3■□□□□ 0.68
TRAPPC12-210ENST00000441983 PARP3Q9Y6F1 533 aa19.3■□□□□ 0.68
TRAPPC12-210ENST00000441983 POLRMTO00411 1230 aaKnown RBP19.29■□□□□ 0.68
TRAPPC12-210ENST00000441983 TCERG1O14776 1098 aaKnown RBP19.29■□□□□ 0.68
TRAPPC12-210ENST00000441983 TRIM28Q13263 835 aaKnown RBP19.29■□□□□ 0.68
TRAPPC12-210ENST00000441983 TCIRG1Q13488 830 aa19.29■□□□□ 0.68
TRAPPC12-210ENST00000441983 TBC1D9BQ66K14 1250 aa19.29■□□□□ 0.68
TRAPPC12-210ENST00000441983 G2E3Q7L622 706 aa19.29■□□□□ 0.68
TRAPPC12-210ENST00000441983 ZNF34Q8IZ26 560 aa19.29■□□□□ 0.68
TRAPPC12-210ENST00000441983 ATF5Q9Y2D1 282 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC12-210ENST00000441983 RIC1Q4ADV7 1423 aa19.28■□□□□ 0.68
TRAPPC12-210ENST00000441983 C10orf71Q711Q0 1435 aa19.28■□□□□ 0.68
TRAPPC12-210ENST00000441983 ARHGAP45Q92619 1136 aa19.28■□□□□ 0.68
TRAPPC12-210ENST00000441983 METTL22Q9BUU2 404 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC12-210ENST00000441983 NYXQ9GZU5 481 aa19.28■□□□□ 0.68
TRAPPC12-210ENST00000441983 NIP7Q9Y221 180 aaKnown RBP eCLIP19.28■□□□□ 0.68
TRAPPC12-210ENST00000441983 PI4KAP2A4QPH2 592 aa19.27■□□□□ 0.68
TRAPPC12-210ENST00000441983 DDR1Q08345 913 aa19.27■□□□□ 0.68
TRAPPC12-210ENST00000441983 NEXNQ0ZGT2 675 aa19.27■□□□□ 0.68
TRAPPC12-210ENST00000441983 PI4KAP1Q8N8J0 262 aa19.27■□□□□ 0.68
TRAPPC12-210ENST00000441983 ISCA1Q9BUE6 129 aa19.27■□□□□ 0.68
TRAPPC12-210ENST00000441983 DNAAF4Q8WXU2 420 aa19.26■□□□□ 0.67
TRAPPC12-210ENST00000441983 MAP3K2Q9Y2U5 619 aa19.26■□□□□ 0.67
TRAPPC12-210ENST00000441983 DLEC1Q9Y238 1755 aa19.26■□□□□ 0.67
TRAPPC12-210ENST00000441983 IPO8O15397 1037 aaKnown RBP19.25■□□□□ 0.67
TRAPPC12-210ENST00000441983 PPP1R42Q7Z4L9 355 aa19.25■□□□□ 0.67
TRAPPC12-210ENST00000441983 API5Q9BZZ5 524 aaKnown RBP19.25■□□□□ 0.67
TRAPPC12-210ENST00000441983 UBN2Q6ZU65 1347 aa19.25■□□□□ 0.67
TRAPPC12-210ENST00000441983 ANKRD31Q8N7Z5 1873 aa19.24■□□□□ 0.67
TRAPPC12-210ENST00000441983 SERPINB2P05120 415 aa19.24■□□□□ 0.67
TRAPPC12-210ENST00000441983 TPTE2Q6XPS3 522 aa19.24■□□□□ 0.67
TRAPPC12-210ENST00000441983 CCDC191Q8NCU4 936 aa19.24■□□□□ 0.67
TRAPPC12-210ENST00000441983 BCL2L13Q9BXK5 485 aa19.24■□□□□ 0.67
TRAPPC12-210ENST00000441983 KIAA1551Q9HCM1 1747 aa19.24■□□□□ 0.67
TRAPPC12-210ENST00000441983 NLRP10Q86W26 655 aa19.23■□□□□ 0.67
TRAPPC12-210ENST00000441983 NBPF5PQ86XG9 351 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC12-210ENST00000441983 CNBD1Q8NA66 436 aa19.23■□□□□ 0.67
TRAPPC12-210ENST00000441983 LINS1Q8NG48 757 aa19.23■□□□□ 0.67
TRAPPC12-210ENST00000441983 RCAN3Q9UKA8 241 aa19.23■□□□□ 0.67
TRAPPC12-210ENST00000441983 PDZRN3Q9UPQ7 1066 aa19.23■□□□□ 0.67
TRAPPC12-210ENST00000441983 CD2APQ9Y5K6 639 aa19.23■□□□□ 0.67
TRAPPC12-210ENST00000441983 ST5P78524 1137 aa19.22■□□□□ 0.67
TRAPPC12-210ENST00000441983 BICDL1Q6ZP65 573 aa19.22■□□□□ 0.67
TRAPPC12-210ENST00000441983 PPP1R1BQ9UD71 204 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC12-210ENST00000441983 DDX60Q8IY21 1712 aaKnown RBP19.22■□□□□ 0.67
TRAPPC12-210ENST00000441983 MYH3P11055 1940 aa19.21■□□□□ 0.67
TRAPPC12-210ENST00000441983 NTSR2O95665 410 aa19.21■□□□□ 0.67
TRAPPC12-210ENST00000441983 HSP90B1P14625 803 aaKnown RBP19.21■□□□□ 0.67
TRAPPC12-210ENST00000441983 GPTP24298 496 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 199.4 ms