RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 COL9A1P20849 921 aa6.48□□□□□ -1.37
CCDC140-202ENST00000440903 TMPOP42166 694 aaKnown RBP6.48□□□□□ -1.37
CCDC140-202ENST00000440903 KRT27Q7Z3Y8 459 aa6.48□□□□□ -1.37
CCDC140-202ENST00000440903 YTHDC1Q96MU7 727 aaKnown RBP6.48□□□□□ -1.37
CCDC140-202ENST00000440903 PLEKHF1Q96S99 279 aa6.48□□□□□ -1.37
CCDC140-202ENST00000440903 KIAA1468Q9P260 1216 aa6.48□□□□□ -1.37
CCDC140-202ENST00000440903 RRP7AQ9Y3A4 280 aaKnown RBP6.48□□□□□ -1.37
CCDC140-202ENST00000440903 CABP4P57796 275 aa6.47□□□□□ -1.37
CCDC140-202ENST00000440903 CCDC27Q2M243 656 aa6.47□□□□□ -1.37
CCDC140-202ENST00000440903 TTC5Q8N0Z6 440 aa6.47□□□□□ -1.37
CCDC140-202ENST00000440903 SYTL4Q96C24 671 aaPredicted RBP6.47□□□□□ -1.37
CCDC140-202ENST00000440903 MYH16Q9H6N6 1097 aa6.47□□□□□ -1.37
CCDC140-202ENST00000440903 RYDENQ9NUL5 291 aaKnown RBP6.47□□□□□ -1.37
CCDC140-202ENST00000440903 TMOD3Q9NYL9 352 aa6.47□□□□□ -1.37
CCDC140-202ENST00000440903 SEPT9Q9UHD8 586 aaPredicted RBP6.47□□□□□ -1.37
CCDC140-202ENST00000440903 DOT1LQ8TEK3 1739 aa6.47□□□□□ -1.37
CCDC140-202ENST00000440903 ZBED9Q6R2W3 1325 aa6.47□□□□□ -1.37
CCDC140-202ENST00000440903 MRC1P22897 1456 aa6.47□□□□□ -1.37
CCDC140-202ENST00000440903 LCE2BO14633 110 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 CYP27B1O15528 508 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 ONECUT3O60422 494 aaPredicted RBP6.46□□□□□ -1.38
CCDC140-202ENST00000440903 HMGB2P26583 209 aaKnown RBP6.46□□□□□ -1.38
CCDC140-202ENST00000440903 GNAI1P63096 354 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 SF3B2Q13435 895 aaKnown RBP6.46□□□□□ -1.38
CCDC140-202ENST00000440903 POTEAQ6S8J7 498 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 MPRIPQ6WCQ1 1025 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 FAM196AQ6ZSG2 479 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 PHACTR3Q96KR7 559 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 SHANK3Q9BYB0 1731 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 HPS5Q9UPZ3 1129 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 SALL2Q9Y467 1007 aaPredicted RBP6.46□□□□□ -1.38
CCDC140-202ENST00000440903 PCDHGA10Q9Y5H3 936 aa6.46□□□□□ -1.38
CCDC140-202ENST00000440903 NHSQ6T4R5 1651 aa6.45□□□□□ -1.38
CCDC140-202ENST00000440903 BCL9O00512 1426 aa6.45□□□□□ -1.38
CCDC140-202ENST00000440903 KDM6AO15550 1401 aaPredicted RBP6.45□□□□□ -1.38
CCDC140-202ENST00000440903 ERVV-2B6SEH9 535 aa6.45□□□□□ -1.38
CCDC140-202ENST00000440903 NRG2O14511 850 aaPredicted RBP6.45□□□□□ -1.38
CCDC140-202ENST00000440903 RNMTO43148 476 aaKnown RBP6.45□□□□□ -1.38
CCDC140-202ENST00000440903 NKX1-1Q15270 411 aaPredicted RBP6.45□□□□□ -1.38
CCDC140-202ENST00000440903 TYW1BQ6NUM6 668 aa6.45□□□□□ -1.38
CCDC140-202ENST00000440903 WDR63Q8IWG1 891 aa6.45□□□□□ -1.38
CCDC140-202ENST00000440903 SMARCC1Q92922 1105 aaPredicted RBP6.45□□□□□ -1.38
CCDC140-202ENST00000440903 FBXW7Q969H0 707 aa6.45□□□□□ -1.38
CCDC140-202ENST00000440903 LRCH3Q96II8 777 aa6.45□□□□□ -1.38
CCDC140-202ENST00000440903 CHMP4AQ9BY43 222 aa6.45□□□□□ -1.38
CCDC140-202ENST00000440903 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.45□□□□□ -1.38
CCDC140-202ENST00000440903 TSR3Q9UJK0 312 aaKnown RBP6.45□□□□□ -1.38
CCDC140-202ENST00000440903 IL16Q14005 1332 aa6.45□□□□□ -1.38
CCDC140-202ENST00000440903 CEMIPQ8WUJ3 1361 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 E9PSI1 815 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 ZNF787Q6DD87 383 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 MCM10Q7L590 875 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 WWC1Q8IX03 1113 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 MARCH10Q8NA82 808 aaPredicted RBP6.44□□□□□ -1.38
CCDC140-202ENST00000440903 DDX27Q96GQ7 796 aaKnown RBP6.44□□□□□ -1.38
CCDC140-202ENST00000440903 PRKD2Q9BZL6 878 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 SLC52A2Q9HAB3 445 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 IFT57Q9NWB7 429 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 BABAM1Q9NWV8 329 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 RGS17Q9UGC6 210 aaPredicted RBP6.44□□□□□ -1.38
CCDC140-202ENST00000440903 TSPYL4Q9UJ04 414 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 LAS1LQ9Y4W2 734 aaKnown RBP6.44□□□□□ -1.38
CCDC140-202ENST00000440903 ADAMTS7Q9UKP4 1686 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 SCN11AQ9UI33 1791 aa6.44□□□□□ -1.38
CCDC140-202ENST00000440903 DLG5Q8TDM6 1919 aa6.43□□□□□ -1.38
CCDC140-202ENST00000440903 BTBD11A6QL63 1104 aa6.43□□□□□ -1.38
CCDC140-202ENST00000440903 TAF7Q15545 349 aaPredicted RBP6.43□□□□□ -1.38
CCDC140-202ENST00000440903 ACSBG1Q96GR2 724 aa6.43□□□□□ -1.38
CCDC140-202ENST00000440903 LARP6Q9BRS8 491 aaKnown RBP6.43□□□□□ -1.38
CCDC140-202ENST00000440903 TOGARAM1Q9Y4F4 1720 aa6.42□□□□□ -1.38
CCDC140-202ENST00000440903 BRWD3Q6RI45 1802 aa6.42□□□□□ -1.38
CCDC140-202ENST00000440903 CENPBP07199 599 aaPredicted RBP6.42□□□□□ -1.38
CCDC140-202ENST00000440903 DCTN1Q14203 1278 aa6.42□□□□□ -1.38
CCDC140-202ENST00000440903 NPM2Q86SE8 214 aaKnown RBP6.42□□□□□ -1.38
CCDC140-202ENST00000440903 CFAP44Q96MT7 982 aa6.42□□□□□ -1.38
CCDC140-202ENST00000440903 FMNL2Q96PY5 1086 aa6.42□□□□□ -1.38
CCDC140-202ENST00000440903 SOS1Q07889 1333 aaPredicted RBP6.42□□□□□ -1.38
CCDC140-202ENST00000440903 PALLDQ8WX93 1383 aa6.42□□□□□ -1.38
CCDC140-202ENST00000440903 PAPPAQ13219 1627 aa6.41□□□□□ -1.38
CCDC140-202ENST00000440903 SENP3-EIF4A1A0A087X0R7 540 aa6.41□□□□□ -1.38
CCDC140-202ENST00000440903 PHF14O94880 888 aa6.41□□□□□ -1.38
CCDC140-202ENST00000440903 BAG6P46379 1132 aa6.41□□□□□ -1.38
CCDC140-202ENST00000440903 PRIM1P49642 420 aaKnown RBP6.41□□□□□ -1.38
CCDC140-202ENST00000440903 CCDC125Q86Z20 511 aa6.41□□□□□ -1.38
CCDC140-202ENST00000440903 NFATC2IPQ8NCF5 419 aa6.41□□□□□ -1.38
CCDC140-202ENST00000440903 IL17REQ8NFR9 667 aa6.41□□□□□ -1.38
CCDC140-202ENST00000440903 THUMPD2Q9BTF0 503 aaKnown RBP6.41□□□□□ -1.38
CCDC140-202ENST00000440903 FANCIQ9NVI1 1328 aa6.41□□□□□ -1.38
CCDC140-202ENST00000440903 SIPA1L3O60292 1781 aaPredicted RBP6.4□□□□□ -1.38
CCDC140-202ENST00000440903 KDM3BQ7LBC6 1761 aa6.4□□□□□ -1.38
CCDC140-202ENST00000440903 TRIM6-TRIM34B2RNG4 842 aa6.4□□□□□ -1.38
CCDC140-202ENST00000440903 TRIM37O94972 964 aa6.4□□□□□ -1.38
CCDC140-202ENST00000440903 CT47B1P0C2W7 299 aaPredicted RBP6.4□□□□□ -1.38
CCDC140-202ENST00000440903 PPP4CP60510 307 aa6.4□□□□□ -1.38
CCDC140-202ENST00000440903 FAM182BQ5T319 152 aa6.4□□□□□ -1.38
CCDC140-202ENST00000440903 ZNF790Q6PG37 636 aa6.4□□□□□ -1.38
CCDC140-202ENST00000440903 STK31Q9BXU1 1019 aa6.4□□□□□ -1.38
CCDC140-202ENST00000440903 TEX13AQ9BXU3 409 aaPredicted RBP6.4□□□□□ -1.38
CCDC140-202ENST00000440903 LGR6Q9HBX8 967 aa6.4□□□□□ -1.38
CCDC140-202ENST00000440903 VIRMAQ69YN4 1812 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms