RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 ARFGEF2Q9Y6D5 1785 aa35.16■■■■□ 3.22
CGREF1-207ENST00000440612 RWDD1Q9H446 243 aaPredicted RBP35.16■■■■□ 3.22
CGREF1-207ENST00000440612 EP400Q96L91 3159 aa35.15■■■■□ 3.22
CGREF1-207ENST00000440612 NUP188Q5SRE5 1749 aa35.15■■■■□ 3.22
CGREF1-207ENST00000440612 CWF19L2Q2TBE0 894 aaKnown RBP35.15■■■■□ 3.22
CGREF1-207ENST00000440612 COL5A3P25940 1745 aaPredicted RBP35.15■■■■□ 3.22
CGREF1-207ENST00000440612 GNAI3P08754 354 aa35.14■■■■□ 3.22
CGREF1-207ENST00000440612 CRKLP46109 303 aaKnown RBP35.12■■■■□ 3.21
CGREF1-207ENST00000440612 CEP85Q6P2H3 762 aa35.11■■■■□ 3.21
CGREF1-207ENST00000440612 CCDC87Q9NVE4 849 aa35.11■■■■□ 3.21
CGREF1-207ENST00000440612 LY75O60449 1722 aa35.11■■■■□ 3.21
CGREF1-207ENST00000440612 NBPF7P0C2Y1 421 aaPredicted RBP35.11■■■■□ 3.21
CGREF1-207ENST00000440612 IL6STP40189 918 aaPredicted RBP35.11■■■■□ 3.21
CGREF1-207ENST00000440612 MYD88Q99836 296 aa35.11■■■■□ 3.21
CGREF1-207ENST00000440612 MYH14Q7Z406 1995 aaKnown RBP35.1■■■■□ 3.21
CGREF1-207ENST00000440612 NEURL1BA8MQ27 555 aa35.1■■■■□ 3.21
CGREF1-207ENST00000440612 GNAI2P04899 355 aa35.1■■■■□ 3.21
CGREF1-207ENST00000440612 ANKRD44Q8N8A2 993 aa35.1■■■■□ 3.21
CGREF1-207ENST00000440612 LINC00116Q8NCU8 138 aa35.1■■■■□ 3.21
CGREF1-207ENST00000440612 KCNQ4P56696 695 aa35.09■■■■□ 3.21
CGREF1-207ENST00000440612 EIF5P55010 431 aaKnown RBP35.08■■■■□ 3.21
CGREF1-207ENST00000440612 UTYO14607 1347 aa35.08■■■■□ 3.21
CGREF1-207ENST00000440612 RPAP2Q8IXW5 612 aaPredicted RBP35.08■■■■□ 3.21
CGREF1-207ENST00000440612 ZBTB3Q9H5J0 574 aa35.08■■■■□ 3.21
CGREF1-207ENST00000440612 NEXNQ0ZGT2 675 aa35.07■■■■□ 3.2
CGREF1-207ENST00000440612 UBTFL1P0CB47 393 aaPredicted RBP35.06■■■■□ 3.2
CGREF1-207ENST00000440612 SKAP1Q86WV1 359 aa35.06■■■■□ 3.2
CGREF1-207ENST00000440612 SMC5Q8IY18 1101 aa35.06■■■■□ 3.2
CGREF1-207ENST00000440612 ZNF330Q9Y3S2 320 aaPredicted RBP35.06■■■■□ 3.2
CGREF1-207ENST00000440612 LRRFIP2Q9Y608 721 aaKnown RBP35.05■■■■□ 3.2
CGREF1-207ENST00000440612 GCKRQ14397 625 aa35.05■■■■□ 3.2
CGREF1-207ENST00000440612 TRIM37O94972 964 aa35.04■■■■□ 3.2
CGREF1-207ENST00000440612 MAP3K15Q6ZN16 1313 aa35.03■■■■□ 3.2
CGREF1-207ENST00000440612 GRM8O00222 908 aa35.03■■■■□ 3.2
CGREF1-207ENST00000440612 ATP5J2-PTCD1G3V325 749 aa35.02■■■■□ 3.2
CGREF1-207ENST00000440612 CNTNAP4Q9C0A0 1308 aa35.02■■■■□ 3.2
CGREF1-207ENST00000440612 CCNL1Q9UK58 526 aaPredicted RBP35.01■■■■□ 3.2
CGREF1-207ENST00000440612 KIF6Q6ZMV9 814 aa35.01■■■■□ 3.19
CGREF1-207ENST00000440612 C9orf78Q9NZ63 289 aaPredicted RBP35■■■■□ 3.19
CGREF1-207ENST00000440612 ISCA1Q9BUE6 129 aa34.99■■■■□ 3.19
CGREF1-207ENST00000440612 HLFQ16534 295 aa34.98■■■■□ 3.19
CGREF1-207ENST00000440612 KAZALD1Q96I82 304 aa34.98■■■■□ 3.19
CGREF1-207ENST00000440612 TCIRG1Q13488 830 aa34.98■■■■□ 3.19
CGREF1-207ENST00000440612 RC3H1Q5TC82 1133 aaKnown RBP34.98■■■■□ 3.19
CGREF1-207ENST00000440612 ATP8B2P98198 1209 aa34.97■■■■□ 3.19
CGREF1-207ENST00000440612 GIGYF2Q6Y7W6 1299 aaKnown RBP34.97■■■■□ 3.19
CGREF1-207ENST00000440612 DZIP3Q86Y13 1208 aaKnown RBP34.97■■■■□ 3.19
CGREF1-207ENST00000440612 LRRC4BQ9NT99 713 aa34.97■■■■□ 3.19
CGREF1-207ENST00000440612 ERVV-1B6SEH8 477 aa34.96■■■■□ 3.19
CGREF1-207ENST00000440612 TBC1D2BQ9UPU7 963 aa34.96■■■■□ 3.19
CGREF1-207ENST00000440612 AFDNP55196 1824 aaKnown RBP34.96■■■■□ 3.19
CGREF1-207ENST00000440612 TAF1LQ8IZX4 1826 aa34.96■■■■□ 3.19
CGREF1-207ENST00000440612 PNMA6EA0A0J9YXQ4 647 aa34.95■■■■□ 3.19
CGREF1-207ENST00000440612 TRIM28Q13263 835 aaKnown RBP34.95■■■■□ 3.19
CGREF1-207ENST00000440612 DCTPP1Q9H773 170 aa34.95■■■■□ 3.19
CGREF1-207ENST00000440612 PDZRN3Q9UPQ7 1066 aa34.95■■■■□ 3.19
CGREF1-207ENST00000440612 CASP7P55210 303 aa34.95■■■■□ 3.18
CGREF1-207ENST00000440612 SUCLG2Q96I99 432 aa34.94■■■■□ 3.18
CGREF1-207ENST00000440612 CCDC191Q8NCU4 936 aa34.93■■■■□ 3.18
CGREF1-207ENST00000440612 GCC1Q96CN9 775 aa34.93■■■■□ 3.18
CGREF1-207ENST00000440612 COL15A1P39059 1388 aa34.92■■■■□ 3.18
CGREF1-207ENST00000440612 MTX1Q13505 466 aa34.92■■■■□ 3.18
CGREF1-207ENST00000440612 ARXQ96QS3 562 aa34.92■■■■□ 3.18
CGREF1-207ENST00000440612 CWC25Q9NXE8 425 aaPredicted RBP34.92■■■■□ 3.18
CGREF1-207ENST00000440612 H7C1W4 665 aa34.91■■■■□ 3.18
CGREF1-207ENST00000440612 CAMTA2O94983 1202 aa34.91■■■■□ 3.18
CGREF1-207ENST00000440612 A0A087WZG4 1122 aa34.9■■■■□ 3.18
CGREF1-207ENST00000440612 SSH3Q8TE77 659 aa34.9■■■■□ 3.18
CGREF1-207ENST00000440612 POLA2Q14181 598 aa34.89■■■■□ 3.18
CGREF1-207ENST00000440612 PPP1R42Q7Z4L9 355 aa34.89■■■■□ 3.18
CGREF1-207ENST00000440612 JARID2Q92833 1246 aaPredicted RBP34.89■■■■□ 3.18
CGREF1-207ENST00000440612 C4BP0C0L5 1744 aa34.89■■■■□ 3.18
CGREF1-207ENST00000440612 RPS6KA4O75676 772 aa34.89■■■■□ 3.18
CGREF1-207ENST00000440612 NUCB1Q02818 461 aa34.89■■■■□ 3.18
CGREF1-207ENST00000440612 PELP1Q8IZL8 1130 aaKnown RBP34.89■■■■□ 3.18
CGREF1-207ENST00000440612 PROM2Q8N271 834 aa34.89■■■■□ 3.18
CGREF1-207ENST00000440612 HMMRO75330 724 aa34.88■■■■□ 3.17
CGREF1-207ENST00000440612 AMIGO3Q86WK7 504 aa34.88■■■■□ 3.17
CGREF1-207ENST00000440612 NUP98P52948 1817 aa34.88■■■■□ 3.17
CGREF1-207ENST00000440612 EPHA10Q5JZY3 1008 aa34.87■■■■□ 3.17
CGREF1-207ENST00000440612 UBE3BQ7Z3V4 1068 aa34.87■■■■□ 3.17
CGREF1-207ENST00000440612 NPM2Q86SE8 214 aaKnown RBP34.87■■■■□ 3.17
CGREF1-207ENST00000440612 HDAC5Q9UQL6 1122 aa34.87■■■■□ 3.17
CGREF1-207ENST00000440612 HSP90AB3PQ58FF7 597 aa34.86■■■■□ 3.17
CGREF1-207ENST00000440612 SLC27A3Q5K4L6 730 aa34.86■■■■□ 3.17
CGREF1-207ENST00000440612 SMIM5Q71RC9 77 aa34.86■■■■□ 3.17
CGREF1-207ENST00000440612 BICC1Q9H694 974 aaKnown RBP34.86■■■■□ 3.17
CGREF1-207ENST00000440612 ANKRD36CQ5JPF3 1778 aa34.86■■■■□ 3.17
CGREF1-207ENST00000440612 ZNF34Q8IZ26 560 aa34.85■■■■□ 3.17
CGREF1-207ENST00000440612 PLSCR1O15162 318 aa34.84■■■■□ 3.17
CGREF1-207ENST00000440612 NLRP10Q86W26 655 aa34.84■■■■□ 3.17
CGREF1-207ENST00000440612 GNPATO15228 680 aa34.83■■■■□ 3.17
CGREF1-207ENST00000440612 BCORQ6W2J9 1755 aa34.83■■■■□ 3.17
CGREF1-207ENST00000440612 SRGAP3O43295 1099 aa34.82■■■■□ 3.17
CGREF1-207ENST00000440612 PDE4AP27815 886 aa34.82■■■■□ 3.17
CGREF1-207ENST00000440612 UBN2Q6ZU65 1347 aa34.82■■■■□ 3.16
CGREF1-207ENST00000440612 TNS1Q9HBL0 1735 aaKnown RBP34.82■■■■□ 3.16
CGREF1-207ENST00000440612 GPTP24298 496 aa34.82■■■■□ 3.16
CGREF1-207ENST00000440612 TXNRD1Q16881 649 aa34.81■■■■□ 3.16
CGREF1-207ENST00000440612 CHD1LQ86WJ1 897 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms