RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 CLASRPQ8N2M8 674 aaKnown RBP9.99□□□□□ -0.81
SPIRE1-204ENST00000440472 SPRYD3Q8NCJ5 442 aa9.99□□□□□ -0.81
SPIRE1-204ENST00000440472 GPATCH3Q96I76 525 aa9.99□□□□□ -0.81
SPIRE1-204ENST00000440472 SNRKQ9NRH2 765 aa9.99□□□□□ -0.81
SPIRE1-204ENST00000440472 ABCA3Q99758 1704 aa9.99□□□□□ -0.81
SPIRE1-204ENST00000440472 SGSM2O43147 1006 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 HSPA4P34932 840 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 NEXNQ0ZGT2 675 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 KCNB2Q92953 911 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 TRIM6-TRIM34B2RNG4 842 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 GOLGA6L22H0YM25 854 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 HIP1O00291 1037 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 PLEKHG5O94827 1062 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 IGKV5-2P06315 115 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 NFATC2IPQ8NCF5 419 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 KAZALD1Q96I82 304 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 ECHDC1Q9NTX5 307 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 RAD50Q92878 1312 aa9.98□□□□□ -0.81
SPIRE1-204ENST00000440472 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 ANXA1P04083 346 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 GCKRQ14397 625 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 UNC5CLQ8IV45 518 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 RUFY2Q8WXA3 655 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 RILPL2Q969X0 211 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 SUCLG2Q96I99 432 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 ZNF496Q96IT1 587 aaPredicted RBP9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 IL1RAPL2Q9NP60 686 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 PCDH11XQ9BZA7 1347 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 PCDH11YQ9BZA8 1340 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 NHSL1Q5SYE7 1610 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 COL5A2P05997 1499 aaPredicted RBP9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 CSB-PGBD3P0DP91 1061 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 RABL6Q3YEC7 729 aaPredicted RBP9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 TTC5Q8N0Z6 440 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 CARD10Q9BWT7 1032 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 COPRSQ9NQ92 184 aa9.97□□□□□ -0.81
SPIRE1-204ENST00000440472 RFX7Q2KHR2 1363 aa9.96□□□□□ -0.81
SPIRE1-204ENST00000440472 TNS2Q63HR2 1409 aa9.96□□□□□ -0.81
SPIRE1-204ENST00000440472 ARFGEF2Q9Y6D5 1785 aa9.96□□□□□ -0.81
SPIRE1-204ENST00000440472 PRAMEF22A3QJZ6 481 aa9.96□□□□□ -0.82
SPIRE1-204ENST00000440472 ANKRD13DQ6ZTN6 518 aa9.96□□□□□ -0.82
SPIRE1-204ENST00000440472 NUTM1Q86Y26 1132 aa9.96□□□□□ -0.82
SPIRE1-204ENST00000440472 EVI5LQ96CN4 794 aa9.96□□□□□ -0.82
SPIRE1-204ENST00000440472 LSG1Q9H089 658 aaKnown RBP9.96□□□□□ -0.82
SPIRE1-204ENST00000440472 BAG4O95429 457 aaKnown RBP9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 CABP4P57796 275 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 G3BP1Q13283 466 aaKnown RBP eCLIP9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 PLBD2Q8NHP8 589 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 XAGE3Q8WTP9 111 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 TM6SF1Q9BZW5 370 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 ANO2Q9NQ90 1003 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 SHANK3Q9BYB0 1731 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 GOLGA6L3A6NEY3 463 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 NEK4P51957 841 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 SLC39A6Q13433 755 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 KLHL40Q2TBA0 621 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 CWF19L2Q2TBE0 894 aaKnown RBP9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 TSHZ3Q63HK5 1081 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 COPS6Q7L5N1 327 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 ZCRB1Q8TBF4 217 aaKnown RBP9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 TMX3Q96JJ7 454 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 BICC1Q9H694 974 aaKnown RBP9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 KCPQ6ZWJ8 1503 aa9.95□□□□□ -0.82
SPIRE1-204ENST00000440472 NUP188Q5SRE5 1749 aa9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 IFIT2P09913 472 aaKnown RBP9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 SSFA2P28290 1259 aa9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 MRE11P49959 708 aa9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 OS9Q13438 667 aaPredicted RBP9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 DDX17Q92841 729 aaKnown RBP9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 SLAIN2Q9P270 581 aa9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 SASH1O94885 1247 aa9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 CASP7P55210 303 aa9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 PALD1Q9ULE6 856 aa9.94□□□□□ -0.82
SPIRE1-204ENST00000440472 AFDNP55196 1824 aaKnown RBP9.93□□□□□ -0.82
SPIRE1-204ENST00000440472 JCADQ9P266 1359 aa9.93□□□□□ -0.82
SPIRE1-204ENST00000440472 RFX5P48382 616 aaPredicted RBP9.93□□□□□ -0.82
SPIRE1-204ENST00000440472 CHRNA2Q15822 529 aa9.93□□□□□ -0.82
SPIRE1-204ENST00000440472 KLHL34Q8N239 644 aa9.93□□□□□ -0.82
SPIRE1-204ENST00000440472 CABLES1Q8TDN4 633 aa9.93□□□□□ -0.82
SPIRE1-204ENST00000440472 TTC14Q96N46 770 aa9.93□□□□□ -0.82
SPIRE1-204ENST00000440472 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
SPIRE1-204ENST00000440472 BRD1O95696 1058 aa9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 PDIA4P13667 645 aaKnown RBP9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 KIAA1211Q6ZU35 1233 aa9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 GPR108Q9NPR9 543 aa9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 PRDM11Q9NQV5 511 aa9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 H7C1W4 665 aa9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 IL2RBP14784 551 aa9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 MYD88Q99836 296 aa9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 ALDH8A1Q9H2A2 487 aaPredicted RBP9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 ATG3Q9NT62 314 aa9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 SNX14Q9Y5W7 946 aa9.92□□□□□ -0.82
SPIRE1-204ENST00000440472 LRP6O75581 1613 aa9.91□□□□□ -0.82
SPIRE1-204ENST00000440472 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
SPIRE1-204ENST00000440472 AIMP1Q12904 312 aaKnown RBP9.91□□□□□ -0.82
SPIRE1-204ENST00000440472 AACSQ86V21 672 aa9.91□□□□□ -0.82
SPIRE1-204ENST00000440472 VSIG10Q8N0Z9 540 aa9.91□□□□□ -0.82
SPIRE1-204ENST00000440472 EAF2Q96CJ1 260 aaPredicted RBP9.91□□□□□ -0.82
SPIRE1-204ENST00000440472 IL25Q9H293 177 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms