RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 CNKSR1Q969H4 720 aa18.01■□□□□ 0.47
FAM3A-213ENST00000440318 STARD3NLO95772 234 aa18■□□□□ 0.47
FAM3A-213ENST00000440318 HMOX1P09601 288 aa18■□□□□ 0.47
FAM3A-213ENST00000440318 MTHFSDQ2M296 383 aaKnown RBP18■□□□□ 0.47
FAM3A-213ENST00000440318 CNBD1Q8NA66 436 aa18■□□□□ 0.47
FAM3A-213ENST00000440318 ZNF330Q9Y3S2 320 aaPredicted RBP18■□□□□ 0.47
FAM3A-213ENST00000440318 RASSF10A6NK89 507 aa17.99■□□□□ 0.47
FAM3A-213ENST00000440318 C7orf43Q8WVR3 580 aa17.99■□□□□ 0.47
FAM3A-213ENST00000440318 SOGA3Q5TF21 947 aa17.98■□□□□ 0.47
FAM3A-213ENST00000440318 MASTLQ96GX5 879 aa17.98■□□□□ 0.47
FAM3A-213ENST00000440318 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
FAM3A-213ENST00000440318 CAMTA2O94983 1202 aa17.97■□□□□ 0.47
FAM3A-213ENST00000440318 DEFB115Q30KQ5 88 aa17.97■□□□□ 0.47
FAM3A-213ENST00000440318 MAP1SQ66K74 1059 aaPredicted RBP17.97■□□□□ 0.47
FAM3A-213ENST00000440318 HACL1Q9UJ83 578 aa17.97■□□□□ 0.47
FAM3A-213ENST00000440318 CLEC11AQ9Y240 323 aa17.97■□□□□ 0.47
FAM3A-213ENST00000440318 BCORQ6W2J9 1755 aa17.96■□□□□ 0.47
FAM3A-213ENST00000440318 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.47
FAM3A-213ENST00000440318 EPHX2P34913 555 aa17.96■□□□□ 0.47
FAM3A-213ENST00000440318 ST5P78524 1137 aa17.96■□□□□ 0.47
FAM3A-213ENST00000440318 OLFM4Q6UX06 510 aa17.96■□□□□ 0.47
FAM3A-213ENST00000440318 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
FAM3A-213ENST00000440318 SETDB2Q96T68 719 aa17.96■□□□□ 0.47
FAM3A-213ENST00000440318 ZNF277Q9NRM2 450 aaPredicted RBP17.96■□□□□ 0.47
FAM3A-213ENST00000440318 RNF123Q5XPI4 1314 aa17.96■□□□□ 0.46
FAM3A-213ENST00000440318 WDR33Q9C0J8 1336 aaKnown RBP17.96■□□□□ 0.46
FAM3A-213ENST00000440318 THSD7BQ9C0I4 1608 aa17.95■□□□□ 0.46
FAM3A-213ENST00000440318 NPHP1O15259 732 aa17.95■□□□□ 0.46
FAM3A-213ENST00000440318 IL6STP40189 918 aaPredicted RBP17.95■□□□□ 0.46
FAM3A-213ENST00000440318 CCDC93Q567U6 631 aa17.95■□□□□ 0.46
FAM3A-213ENST00000440318 CNTROBQ8N137 903 aa17.95■□□□□ 0.46
FAM3A-213ENST00000440318 A1BGP04217 495 aa17.94■□□□□ 0.46
FAM3A-213ENST00000440318 MAP2K1Q02750 393 aaPredicted RBP17.94■□□□□ 0.46
FAM3A-213ENST00000440318 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
FAM3A-213ENST00000440318 ABT1Q9ULW3 272 aaKnown RBP17.94■□□□□ 0.46
FAM3A-213ENST00000440318 ZNF316A6NFI3 1004 aaPredicted RBP17.93■□□□□ 0.46
FAM3A-213ENST00000440318 MLLT1Q03111 559 aaPredicted RBP17.93■□□□□ 0.46
FAM3A-213ENST00000440318 SIPA1L3O60292 1781 aaPredicted RBP17.93■□□□□ 0.46
FAM3A-213ENST00000440318 CCDC85CA6NKD9 419 aa17.92■□□□□ 0.46
FAM3A-213ENST00000440318 ZNF790Q6PG37 636 aa17.92■□□□□ 0.46
FAM3A-213ENST00000440318 PNMA8AQ86V59 439 aaPredicted RBP17.92■□□□□ 0.46
FAM3A-213ENST00000440318 RGS19P49795 217 aa17.91■□□□□ 0.46
FAM3A-213ENST00000440318 FMR1Q06787 632 aaKnown RBP eCLIP17.91■□□□□ 0.46
FAM3A-213ENST00000440318 IL17REQ8NFR9 667 aa17.91■□□□□ 0.46
FAM3A-213ENST00000440318 TEX13AQ9BXU3 409 aaPredicted RBP17.91■□□□□ 0.46
FAM3A-213ENST00000440318 FZD9O00144 591 aa17.9■□□□□ 0.46
FAM3A-213ENST00000440318 NPR1P16066 1061 aa17.9■□□□□ 0.46
FAM3A-213ENST00000440318 DZIP3Q86Y13 1208 aaKnown RBP17.9■□□□□ 0.46
FAM3A-213ENST00000440318 LTBP1Q14766 1721 aa17.89■□□□□ 0.46
FAM3A-213ENST00000440318 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
FAM3A-213ENST00000440318 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
FAM3A-213ENST00000440318 CAPNS2Q96L46 248 aa17.89■□□□□ 0.45
FAM3A-213ENST00000440318 DDX21Q9NR30 783 aaKnown RBP eCLIP17.89■□□□□ 0.45
FAM3A-213ENST00000440318 COL4A5P29400 1685 aa17.89■□□□□ 0.45
FAM3A-213ENST00000440318 KLRG2A4D1S0 409 aaPredicted RBP17.88■□□□□ 0.45
FAM3A-213ENST00000440318 IARSP41252 1262 aaKnown RBP17.88■□□□□ 0.45
FAM3A-213ENST00000440318 TEFQ10587 303 aa17.88■□□□□ 0.45
FAM3A-213ENST00000440318 AMER1Q5JTC6 1135 aaPredicted RBP17.88■□□□□ 0.45
FAM3A-213ENST00000440318 GPC2Q8N158 579 aa17.88■□□□□ 0.45
FAM3A-213ENST00000440318 TSKSQ9UJT2 592 aa17.88■□□□□ 0.45
FAM3A-213ENST00000440318 SNED1Q8TER0 1413 aa17.88■□□□□ 0.45
FAM3A-213ENST00000440318 KCNQ3O43525 872 aa17.87■□□□□ 0.45
FAM3A-213ENST00000440318 CYP4F22Q6NT55 531 aa17.87■□□□□ 0.45
FAM3A-213ENST00000440318 RTKN2Q8IZC4 609 aa17.87■□□□□ 0.45
FAM3A-213ENST00000440318 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
FAM3A-213ENST00000440318 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
FAM3A-213ENST00000440318 GRM1Q13255 1194 aa17.86■□□□□ 0.45
FAM3A-213ENST00000440318 PAXIP1Q6ZW49 1069 aaPredicted RBP17.86■□□□□ 0.45
FAM3A-213ENST00000440318 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
FAM3A-213ENST00000440318 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
FAM3A-213ENST00000440318 PCDH10Q9P2E7 1040 aa17.86■□□□□ 0.45
FAM3A-213ENST00000440318 DIAPH1O60610 1272 aaKnown RBP17.85■□□□□ 0.45
FAM3A-213ENST00000440318 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
FAM3A-213ENST00000440318 USP16Q9Y5T5 823 aa17.85■□□□□ 0.45
FAM3A-213ENST00000440318 PRAMEF22A3QJZ6 481 aa17.84■□□□□ 0.45
FAM3A-213ENST00000440318 GNAT3A8MTJ3 354 aa17.84■□□□□ 0.45
FAM3A-213ENST00000440318 TRAF5O00463 557 aa17.84■□□□□ 0.45
FAM3A-213ENST00000440318 CST9Q5W186 159 aa17.84■□□□□ 0.45
FAM3A-213ENST00000440318 CLEC4GQ6UXB4 293 aa17.84■□□□□ 0.45
FAM3A-213ENST00000440318 GPR101Q96P66 508 aaPredicted RBP17.84■□□□□ 0.45
FAM3A-213ENST00000440318 BEGAINQ9BUH8 593 aa17.84■□□□□ 0.45
FAM3A-213ENST00000440318 GJA3Q9Y6H8 435 aa17.84■□□□□ 0.45
FAM3A-213ENST00000440318 FAM177BA6PVY3 158 aa17.83■□□□□ 0.44
FAM3A-213ENST00000440318 ECE1P42892 770 aa17.83■□□□□ 0.44
FAM3A-213ENST00000440318 SCNN1DP51172 638 aa17.83■□□□□ 0.44
FAM3A-213ENST00000440318 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
FAM3A-213ENST00000440318 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
FAM3A-213ENST00000440318 TRPM7Q96QT4 1865 aa17.82■□□□□ 0.44
FAM3A-213ENST00000440318 CEMIPQ8WUJ3 1361 aa17.82■□□□□ 0.44
FAM3A-213ENST00000440318 TNRC18O15417 2968 aaPredicted RBP17.82■□□□□ 0.44
FAM3A-213ENST00000440318 AOC2O75106 756 aa17.82■□□□□ 0.44
FAM3A-213ENST00000440318 EPS15P42566 896 aa17.82■□□□□ 0.44
FAM3A-213ENST00000440318 NIP7Q9Y221 180 aaKnown RBP eCLIP17.82■□□□□ 0.44
FAM3A-213ENST00000440318 TPTE2Q6XPS3 522 aa17.81■□□□□ 0.44
FAM3A-213ENST00000440318 SLC51AQ86UW1 340 aa17.81■□□□□ 0.44
FAM3A-213ENST00000440318 GAS2L2Q8NHY3 880 aa17.81■□□□□ 0.44
FAM3A-213ENST00000440318 PSMD1Q99460 953 aa17.81■□□□□ 0.44
FAM3A-213ENST00000440318 MCOLN1Q9GZU1 580 aa17.81■□□□□ 0.44
FAM3A-213ENST00000440318 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
FAM3A-213ENST00000440318 TLL2Q9Y6L7 1015 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms