RNA–Protein interactions for RNA: ENST00000440099.1

AP000350.3-201, humanhuman

BASIC

Gene AP000350.3, Length 289 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000350.3-201ENST00000440099 SRGNP10124 158 aa12.02□□□□□ -0.49
AP000350.3-201ENST00000440099 PRPF40BQ6NWY9 871 aaKnown RBP12.02□□□□□ -0.49
AP000350.3-201ENST00000440099 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.49
AP000350.3-201ENST00000440099 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
AP000350.3-201ENST00000440099 ANKRD31Q8N7Z5 1873 aa12.02□□□□□ -0.49
AP000350.3-201ENST00000440099 IQCA1LA6NCM1 817 aa12.01□□□□□ -0.49
AP000350.3-201ENST00000440099 KCNQ3O43525 872 aa12.01□□□□□ -0.49
AP000350.3-201ENST00000440099 NEFMP07197 916 aa12.01□□□□□ -0.49
AP000350.3-201ENST00000440099 U2AF1L5P0DN76 240 aaPredicted RBP12.01□□□□□ -0.49
AP000350.3-201ENST00000440099 U2AF1Q01081 240 aaKnown RBP eCLIP12.01□□□□□ -0.49
AP000350.3-201ENST00000440099 COL13A1Q5TAT6 717 aaPredicted RBP12.01□□□□□ -0.49
AP000350.3-201ENST00000440099 TPTE2Q6XPS3 522 aa12.01□□□□□ -0.49
AP000350.3-201ENST00000440099 USP16Q9Y5T5 823 aa12.01□□□□□ -0.49
AP000350.3-201ENST00000440099 FER1L6Q2WGJ9 1857 aa12□□□□□ -0.49
AP000350.3-201ENST00000440099 DICER1Q9UPY3 1922 aaKnown RBP12□□□□□ -0.49
AP000350.3-201ENST00000440099 POTECB2RU33 542 aa12□□□□□ -0.49
AP000350.3-201ENST00000440099 RGL2O15211 777 aa12□□□□□ -0.49
AP000350.3-201ENST00000440099 HTATSF1O43719 755 aaKnown RBP12□□□□□ -0.49
AP000350.3-201ENST00000440099 NPR1P16066 1061 aa12□□□□□ -0.49
AP000350.3-201ENST00000440099 CCDC93Q567U6 631 aa12□□□□□ -0.49
AP000350.3-201ENST00000440099 CHADLQ6NUI6 762 aa12□□□□□ -0.49
AP000350.3-201ENST00000440099 TNS4Q8IZW8 715 aa12□□□□□ -0.49
AP000350.3-201ENST00000440099 GTF2E1P29083 439 aaPredicted RBP11.99□□□□□ -0.49
AP000350.3-201ENST00000440099 MCM10Q7L590 875 aa11.99□□□□□ -0.49
AP000350.3-201ENST00000440099 NIP7Q9Y221 180 aaKnown RBP eCLIP11.99□□□□□ -0.49
AP000350.3-201ENST00000440099 COL11A2P13942 1736 aaPredicted RBP11.99□□□□□ -0.49
AP000350.3-201ENST00000440099 BCORQ6W2J9 1755 aa11.98□□□□□ -0.49
AP000350.3-201ENST00000440099 DDNO94850 711 aaPredicted RBP11.98□□□□□ -0.49
AP000350.3-201ENST00000440099 HSPA1AP0DMV8 641 aaKnown RBP11.98□□□□□ -0.49
AP000350.3-201ENST00000440099 HSPA1BP0DMV9 641 aaKnown RBP11.98□□□□□ -0.49
AP000350.3-201ENST00000440099 ALDH1B1P30837 517 aa11.98□□□□□ -0.49
AP000350.3-201ENST00000440099 PIP4K2AP48426 406 aaPredicted RBP11.98□□□□□ -0.49
AP000350.3-201ENST00000440099 TAF7Q15545 349 aaPredicted RBP11.98□□□□□ -0.49
AP000350.3-201ENST00000440099 RTKN2Q8IZC4 609 aa11.98□□□□□ -0.49
AP000350.3-201ENST00000440099 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
AP000350.3-201ENST00000440099 SLX4Q8IY92 1834 aa11.97□□□□□ -0.49
AP000350.3-201ENST00000440099 PPP2R1AP30153 589 aa11.97□□□□□ -0.49
AP000350.3-201ENST00000440099 ARFGEF2Q9Y6D5 1785 aa11.97□□□□□ -0.49
AP000350.3-201ENST00000440099 CACNA1SQ13698 1873 aa11.96□□□□□ -0.49
AP000350.3-201ENST00000440099 PRAMEF22A3QJZ6 481 aa11.96□□□□□ -0.49
AP000350.3-201ENST00000440099 KLRG2A4D1S0 409 aaPredicted RBP11.96□□□□□ -0.49
AP000350.3-201ENST00000440099 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.49
AP000350.3-201ENST00000440099 LDHDQ86WU2 507 aa11.96□□□□□ -0.49
AP000350.3-201ENST00000440099 PNISRQ8TF01 805 aaKnown RBP11.96□□□□□ -0.49
AP000350.3-201ENST00000440099 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
AP000350.3-201ENST00000440099 FAM177BA6PVY3 158 aa11.95□□□□□ -0.5
AP000350.3-201ENST00000440099 CAPN15O75808 1086 aa11.95□□□□□ -0.5
AP000350.3-201ENST00000440099 DCTN1Q14203 1278 aa11.95□□□□□ -0.5
AP000350.3-201ENST00000440099 C7orf43Q8WVR3 580 aa11.95□□□□□ -0.5
AP000350.3-201ENST00000440099 NYXQ9GZU5 481 aa11.95□□□□□ -0.5
AP000350.3-201ENST00000440099 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
AP000350.3-201ENST00000440099 NBPF10Q6P3W6 841 aaKnown RBP11.94□□□□□ -0.5
AP000350.3-201ENST00000440099 PNMA8AQ86V59 439 aaPredicted RBP11.94□□□□□ -0.5
AP000350.3-201ENST00000440099 NBPF15Q8N660 670 aa11.94□□□□□ -0.5
AP000350.3-201ENST00000440099 TAF1DQ9H5J8 278 aaPredicted RBP11.94□□□□□ -0.5
AP000350.3-201ENST00000440099 MKRN1Q9UHC7 482 aaKnown RBP11.94□□□□□ -0.5
AP000350.3-201ENST00000440099 HACL1Q9UJ83 578 aa11.94□□□□□ -0.5
AP000350.3-201ENST00000440099 SCN4AP35499 1836 aa11.94□□□□□ -0.5
AP000350.3-201ENST00000440099 ERVV-1B6SEH8 477 aa11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 EAPPQ56P03 285 aaPredicted RBP11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 CC2D2BQ6DHV5 1058 aa11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 KIF6Q6ZMV9 814 aa11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 JDP2Q8WYK2 163 aa11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 ZNF277Q9NRM2 450 aaPredicted RBP11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
AP000350.3-201ENST00000440099 IARSP41252 1262 aaKnown RBP11.92□□□□□ -0.5
AP000350.3-201ENST00000440099 HLFQ16534 295 aa11.92□□□□□ -0.5
AP000350.3-201ENST00000440099 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
AP000350.3-201ENST00000440099 RPGRQ92834 1020 aaKnown RBP11.92□□□□□ -0.5
AP000350.3-201ENST00000440099 MIS18AQ9NYP9 233 aa11.92□□□□□ -0.5
AP000350.3-201ENST00000440099 PASKQ96RG2 1323 aa11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 PCNTO95613 3336 aa11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 TMEM88BA6NKF7 163 aa11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 EPHX2P34913 555 aa11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 GPC2Q8N158 579 aa11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 SYNE4Q8N205 404 aa11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 AIDAQ96BJ3 306 aa11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 PSMD1Q99460 953 aa11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 TMX4Q9H1E5 349 aaPredicted RBP11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 RRP7AQ9Y3A4 280 aaKnown RBP11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 CNTNAP1P78357 1384 aa11.91□□□□□ -0.5
AP000350.3-201ENST00000440099 MAP3K15Q6ZN16 1313 aa11.9□□□□□ -0.5
AP000350.3-201ENST00000440099 ZNF541Q9H0D2 1346 aa11.9□□□□□ -0.5
AP000350.3-201ENST00000440099 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.5
AP000350.3-201ENST00000440099 FZD9O00144 591 aa11.9□□□□□ -0.5
AP000350.3-201ENST00000440099 EIF6P56537 245 aaKnown RBP11.9□□□□□ -0.5
AP000350.3-201ENST00000440099 CRY2Q49AN0 593 aa11.9□□□□□ -0.5
AP000350.3-201ENST00000440099 MAPK8IP3Q9UPT6 1336 aa11.89□□□□□ -0.51
AP000350.3-201ENST00000440099 ITGBL1O95965 494 aaPredicted RBP11.89□□□□□ -0.51
AP000350.3-201ENST00000440099 MYL6BP14649 208 aa11.89□□□□□ -0.51
AP000350.3-201ENST00000440099 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
AP000350.3-201ENST00000440099 EIF4A1P60842 406 aaKnown RBP11.89□□□□□ -0.51
AP000350.3-201ENST00000440099 OLFM4Q6UX06 510 aa11.89□□□□□ -0.51
AP000350.3-201ENST00000440099 NUTM1Q86Y26 1132 aa11.89□□□□□ -0.51
AP000350.3-201ENST00000440099 RBM17Q96I25 401 aaKnown RBP11.89□□□□□ -0.51
AP000350.3-201ENST00000440099 IBTKQ9P2D0 1353 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms