RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	POTEJ	P0CG39	1038 aa		21.85	■■□□□ 1.09
LAMB1-205	ENST00000439976	PRPF40B	Q6NWY9	871 aa	Known RBP	21.85	■■□□□ 1.09
LAMB1-205	ENST00000439976	TNS4	Q8IZW8	715 aa		21.85	■■□□□ 1.09
LAMB1-205	ENST00000439976	USP16	Q9Y5T5	823 aa		21.85	■■□□□ 1.09
LAMB1-205	ENST00000439976	PRAMEF22	A3QJZ6	481 aa		21.84	■■□□□ 1.09
LAMB1-205	ENST00000439976	PIP4K2A	P48426	406 aa	Predicted RBP	21.84	■■□□□ 1.09
LAMB1-205	ENST00000439976	DZIP3	Q86Y13	1208 aa	Known RBP	21.84	■■□□□ 1.09
LAMB1-205	ENST00000439976	CNKSR1	Q969H4	720 aa		21.84	■■□□□ 1.09
LAMB1-205	ENST00000439976	RSPH6A	Q9H0K4	717 aa		21.84	■■□□□ 1.09
LAMB1-205	ENST00000439976	BTBD11	A6QL63	1104 aa		21.83	■■□□□ 1.09
LAMB1-205	ENST00000439976	DDN	O94850	711 aa	Predicted RBP	21.83	■■□□□ 1.09
LAMB1-205	ENST00000439976	PRKAR2B	P31323	418 aa		21.83	■■□□□ 1.09
LAMB1-205	ENST00000439976	CNGB1	Q14028	1251 aa	Predicted RBP	21.83	■■□□□ 1.09
LAMB1-205	ENST00000439976	C7orf43	Q8WVR3	580 aa		21.83	■■□□□ 1.09
LAMB1-205	ENST00000439976	MASTL	Q96GX5	879 aa		21.82	■■□□□ 1.08
LAMB1-205	ENST00000439976	CAPN15	O75808	1086 aa		21.81	■■□□□ 1.08
LAMB1-205	ENST00000439976	ST5	P78524	1137 aa		21.81	■■□□□ 1.08
LAMB1-205	ENST00000439976	CHADL	Q6NUI6	762 aa		21.81	■■□□□ 1.08
LAMB1-205	ENST00000439976	KLRG2	A4D1S0	409 aa	Predicted RBP	21.79	■■□□□ 1.08
LAMB1-205	ENST00000439976	SOGA3	Q5TF21	947 aa		21.79	■■□□□ 1.08
LAMB1-205	ENST00000439976	CLEC4G	Q6UXB4	293 aa		21.79	■■□□□ 1.08
LAMB1-205	ENST00000439976	CREBZF	Q9NS37	354 aa		21.79	■■□□□ 1.08
LAMB1-205	ENST00000439976	NBPF26	B4DH59	902 aa		21.78	■■□□□ 1.08
LAMB1-205	ENST00000439976	NBPF10	Q6P3W6	841 aa	Known RBP	21.78	■■□□□ 1.08
LAMB1-205	ENST00000439976	NPM2	Q86SE8	214 aa	Known RBP	21.78	■■□□□ 1.08
LAMB1-205	ENST00000439976	NBPF15	Q8N660	670 aa		21.78	■■□□□ 1.08
LAMB1-205	ENST00000439976	NPHP1	O15259	732 aa		21.77	■■□□□ 1.08
LAMB1-205	ENST00000439976	NBPF5P	Q86XG9	351 aa	Predicted RBP	21.77	■■□□□ 1.08
LAMB1-205	ENST00000439976	L3MBTL3	Q96JM7	780 aa	Predicted RBP	21.77	■■□□□ 1.08
LAMB1-205	ENST00000439976	PASK	Q96RG2	1323 aa		21.77	■■□□□ 1.07
LAMB1-205	ENST00000439976	SCN4A	P35499	1836 aa		21.76	■■□□□ 1.07
LAMB1-205	ENST00000439976	SNRPA1	P09661	255 aa	Known RBP	21.76	■■□□□ 1.07
LAMB1-205	ENST00000439976	MCM10	Q7L590	875 aa		21.76	■■□□□ 1.07
LAMB1-205	ENST00000439976	MKRN1	Q9UHC7	482 aa	Known RBP	21.76	■■□□□ 1.07
LAMB1-205	ENST00000439976	OLFM4	Q6UX06	510 aa		21.75	■■□□□ 1.07
LAMB1-205	ENST00000439976	TAF1D	Q9H5J8	278 aa	Predicted RBP	21.75	■■□□□ 1.07
LAMB1-205	ENST00000439976	NPR1	P16066	1061 aa		21.74	■■□□□ 1.07
LAMB1-205	ENST00000439976	CCDC93	Q567U6	631 aa		21.74	■■□□□ 1.07
LAMB1-205	ENST00000439976	ZNF541	Q9H0D2	1346 aa		21.74	■■□□□ 1.07
LAMB1-205	ENST00000439976	RGL2	O15211	777 aa		21.73	■■□□□ 1.07
LAMB1-205	ENST00000439976	DCTN1	Q14203	1278 aa		21.73	■■□□□ 1.07
LAMB1-205	ENST00000439976	ZNF652	Q9Y2D9	606 aa		21.73	■■□□□ 1.07
LAMB1-205	ENST00000439976	CNTNAP1	P78357	1384 aa		21.73	■■□□□ 1.07
LAMB1-205	ENST00000439976	SNED1	Q8TER0	1413 aa		21.72	■■□□□ 1.07
LAMB1-205	ENST00000439976	ADAMTSL1	Q8N6G6	1762 aa		21.72	■■□□□ 1.07
LAMB1-205	ENST00000439976	IQCA1L	A6NCM1	817 aa		21.72	■■□□□ 1.07
LAMB1-205	ENST00000439976	FKBP4	Q02790	459 aa	Known RBP eCLIP	21.72	■■□□□ 1.07
LAMB1-205	ENST00000439976	LDHD	Q86WU2	507 aa		21.72	■■□□□ 1.07
LAMB1-205	ENST00000439976	CFAP53	Q96M91	514 aa		21.72	■■□□□ 1.07
LAMB1-205	ENST00000439976	ZNF277	Q9NRM2	450 aa	Predicted RBP	21.72	■■□□□ 1.07
LAMB1-205	ENST00000439976	NIP7	Q9Y221	180 aa	Known RBP eCLIP	21.72	■■□□□ 1.07
LAMB1-205	ENST00000439976	ITGBL1	O95965	494 aa	Predicted RBP	21.71	■■□□□ 1.07
LAMB1-205	ENST00000439976	HLF	Q16534	295 aa		21.71	■■□□□ 1.07
LAMB1-205	ENST00000439976	TPTE2	Q6XPS3	522 aa		21.71	■■□□□ 1.07
LAMB1-205	ENST00000439976	U2AF1L5	P0DN76	240 aa	Predicted RBP	21.7	■■□□□ 1.06
LAMB1-205	ENST00000439976	U2AF1	Q01081	240 aa	Known RBP eCLIP	21.7	■■□□□ 1.06	8e-7	■□□□□ 9.4
LAMB1-205	ENST00000439976	PPP2R1A	P30153	589 aa		21.69	■■□□□ 1.06
LAMB1-205	ENST00000439976	RTF1	Q92541	710 aa	Known RBP	21.69	■■□□□ 1.06
LAMB1-205	ENST00000439976	NUDC	Q9Y266	331 aa		21.69	■■□□□ 1.06
LAMB1-205	ENST00000439976	FOXN1	O15353	648 aa		21.68	■■□□□ 1.06
LAMB1-205	ENST00000439976	LAMB4	A4D0S4	1761 aa		21.68	■■□□□ 1.06
LAMB1-205	ENST00000439976	ABCC12	Q96J65	1359 aa		21.67	■■□□□ 1.06
LAMB1-205	ENST00000439976	FAM177B	A6PVY3	158 aa		21.67	■■□□□ 1.06
LAMB1-205	ENST00000439976	FZD9	O00144	591 aa		21.67	■■□□□ 1.06
LAMB1-205	ENST00000439976	HTATSF1	O43719	755 aa	Known RBP	21.67	■■□□□ 1.06
LAMB1-205	ENST00000439976	RTKN2	Q8IZC4	609 aa		21.67	■■□□□ 1.06
LAMB1-205	ENST00000439976	COL4A5	P29400	1685 aa		21.66	■■□□□ 1.06
LAMB1-205	ENST00000439976	CRY2	Q49AN0	593 aa		21.66	■■□□□ 1.06
LAMB1-205	ENST00000439976	MIS18A	Q9NYP9	233 aa		21.66	■■□□□ 1.06
LAMB1-205	ENST00000439976	IARS	P41252	1262 aa	Known RBP	21.65	■■□□□ 1.06
LAMB1-205	ENST00000439976	TAF7	Q15545	349 aa	Predicted RBP	21.65	■■□□□ 1.06
LAMB1-205	ENST00000439976	SYNE4	Q8N205	404 aa		21.65	■■□□□ 1.06
LAMB1-205	ENST00000439976	HACL1	Q9UJ83	578 aa		21.65	■■□□□ 1.06
LAMB1-205	ENST00000439976	KDM3B	Q7LBC6	1761 aa		21.64	■■□□□ 1.06
LAMB1-205	ENST00000439976	RNF123	Q5XPI4	1314 aa		21.64	■■□□□ 1.05
LAMB1-205	ENST00000439976	TMEM88B	A6NKF7	163 aa		21.64	■■□□□ 1.05
LAMB1-205	ENST00000439976	ALDH1B1	P30837	517 aa		21.64	■■□□□ 1.05
LAMB1-205	ENST00000439976	EPHX2	P34913	555 aa		21.64	■■□□□ 1.05
LAMB1-205	ENST00000439976	VEGFB	P49765	207 aa		21.64	■■□□□ 1.05
LAMB1-205	ENST00000439976	EAPP	Q56P03	285 aa	Predicted RBP	21.64	■■□□□ 1.05
LAMB1-205	ENST00000439976	NUP98	P52948	1817 aa		21.64	■■□□□ 1.05
LAMB1-205	ENST00000439976	DLG5	Q8TDM6	1919 aa		21.63	■■□□□ 1.05
LAMB1-205	ENST00000439976	SLC51A	Q86UW1	340 aa		21.62	■■□□□ 1.05
LAMB1-205	ENST00000439976	NUTM1	Q86Y26	1132 aa		21.62	■■□□□ 1.05
LAMB1-205	ENST00000439976	PSMD1	Q99460	953 aa		21.62	■■□□□ 1.05
LAMB1-205	ENST00000439976	LTBP1	Q14766	1721 aa		21.61	■■□□□ 1.05
LAMB1-205	ENST00000439976	ERVV-1	B6SEH8	477 aa		21.61	■■□□□ 1.05
LAMB1-205	ENST00000439976	GPC2	Q8N158	579 aa		21.61	■■□□□ 1.05
LAMB1-205	ENST00000439976	PRDM10	Q9NQV6	1147 aa		21.61	■■□□□ 1.05
LAMB1-205	ENST00000439976	MAP1S	Q66K74	1059 aa	Predicted RBP	21.6	■■□□□ 1.05
LAMB1-205	ENST00000439976	TTLL7	Q6ZT98	887 aa		21.6	■■□□□ 1.05
LAMB1-205	ENST00000439976	CNTROB	Q8N137	903 aa		21.6	■■□□□ 1.05
LAMB1-205	ENST00000439976	WBP1L	Q9NX94	342 aa		21.6	■■□□□ 1.05
LAMB1-205	ENST00000439976	MAP3K15	Q6ZN16	1313 aa		21.59	■■□□□ 1.05
LAMB1-205	ENST00000439976	UBN2	Q6ZU65	1347 aa		21.59	■■□□□ 1.05
LAMB1-205	ENST00000439976	RASSF10	A6NK89	507 aa		21.59	■■□□□ 1.05
LAMB1-205	ENST00000439976	GTF2E1	P29083	439 aa	Predicted RBP	21.59	■■□□□ 1.05
LAMB1-205	ENST00000439976	HOXA10	P31260	410 aa	Predicted RBP	21.59	■■□□□ 1.05
LAMB1-205	ENST00000439976	RIC1	Q4ADV7	1423 aa		21.59	■■□□□ 1.05
LAMB1-205	ENST00000439976	PNMA8A	Q86V59	439 aa	Predicted RBP	21.59	■■□□□ 1.05

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