RNA–Protein interactions for RNA: ENST00000439790.5

LINC00460-202, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best)

Gene LINC00460, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-202ENST00000439790 CASC1Q6TDU7 716 aa8.54□□□□□ -1.04
LINC00460-202ENST00000439790 PIBF1Q8WXW3 757 aa8.54□□□□□ -1.04
LINC00460-202ENST00000439790 BCL11BQ9C0K0 894 aaPredicted RBP8.54□□□□□ -1.04
LINC00460-202ENST00000439790 GPBP1L1Q9HC44 474 aaPredicted RBP8.54□□□□□ -1.04
LINC00460-202ENST00000439790 SPTLC3Q9NUV7 552 aa8.54□□□□□ -1.04
LINC00460-202ENST00000439790 PPIP5K1Q6PFW1 1433 aa8.54□□□□□ -1.04
LINC00460-202ENST00000439790 ARHGEF10O15013 1369 aa8.53□□□□□ -1.04
LINC00460-202ENST00000439790 KIF3CO14782 793 aa8.53□□□□□ -1.04
LINC00460-202ENST00000439790 CDC45O75419 566 aa8.53□□□□□ -1.04
LINC00460-202ENST00000439790 CYP2E1P05181 493 aaPredicted RBP8.53□□□□□ -1.04
LINC00460-202ENST00000439790 DPY19L2Q6NUT2 758 aa8.53□□□□□ -1.04
LINC00460-202ENST00000439790 CAVIN1Q6NZI2 390 aaKnown RBP8.53□□□□□ -1.04
LINC00460-202ENST00000439790 STRN4Q9NRL3 753 aa8.53□□□□□ -1.04
LINC00460-202ENST00000439790 CALCOCO1Q9P1Z2 691 aa8.53□□□□□ -1.04
LINC00460-202ENST00000439790 GOLGA6L6A8MZA4 724 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 PLSCR1O15162 318 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 EPB41L2O43491 1005 aaKnown RBP8.52□□□□□ -1.05
LINC00460-202ENST00000439790 CHRNA2Q15822 529 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 SLC15A2Q16348 729 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 ATF7IPQ6VMQ6 1270 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 CHD1LQ86WJ1 897 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 ARHGAP45Q92619 1136 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 USP25Q9UHP3 1055 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 PHF8Q9UPP1 1060 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 KIF1AQ12756 1690 aa8.52□□□□□ -1.05
LINC00460-202ENST00000439790 ANKRD26Q9UPS8 1709 aa8.51□□□□□ -1.05
LINC00460-202ENST00000439790 NRXN1Q9ULB1 1477 aa8.51□□□□□ -1.05
LINC00460-202ENST00000439790 CDK11BP21127 795 aaKnown RBP8.51□□□□□ -1.05
LINC00460-202ENST00000439790 APLP1P51693 650 aa8.51□□□□□ -1.05
LINC00460-202ENST00000439790 CTR9Q6PD62 1173 aa8.51□□□□□ -1.05
LINC00460-202ENST00000439790 EFCAB3Q8N7B9 438 aa8.51□□□□□ -1.05
LINC00460-202ENST00000439790 HS3ST6Q96QI5 342 aa8.51□□□□□ -1.05
LINC00460-202ENST00000439790 KIF1BO60333 1816 aa8.51□□□□□ -1.05
LINC00460-202ENST00000439790 ANKRD36BQ8N2N9 1353 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 CTIFO43310 598 aaKnown RBP8.5□□□□□ -1.05
LINC00460-202ENST00000439790 TUBB4AP04350 444 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 PTMAP06454 111 aaKnown RBP8.5□□□□□ -1.05
LINC00460-202ENST00000439790 NOLC1Q14978 699 aaKnown RBP eCLIP8.5□□□□□ -1.05
LINC00460-202ENST00000439790 RNF20Q5VTR2 975 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 BARGINQ6ZT62 677 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 PEAK1Q9H792 1746 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 PRDM11Q9NQV5 511 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 ZBTB40Q9NUA8 1239 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 LMBRD1Q9NUN5 540 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 FMN2Q9NZ56 1722 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 PAXBP1Q9Y5B6 917 aa8.5□□□□□ -1.05
LINC00460-202ENST00000439790 KIAA0232Q92628 1395 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 A0A0U1RQG5 324 aaPredicted RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 PSME1Q06323 249 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 FKBP5Q13451 457 aaPredicted RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 DHX8Q14562 1220 aaKnown RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 DNTTIP2Q5QJE6 756 aaKnown RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 INTS3Q68E01 1043 aaKnown RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 LARP1Q6PKG0 1096 aaKnown RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 CCDC146Q8IYE0 955 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 TCP11L2Q8N4U5 519 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 JMYQ8N9B5 988 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 ANKRD7Q92527 254 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 ZFP91Q96JP5 570 aaPredicted RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 TSPY26PQ9H489 355 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 STK32BQ9NY57 414 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 STK26Q9P289 416 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 CGNQ9P2M7 1197 aaKnown RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 WWC3Q9ULE0 1092 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 NAP1L2Q9ULW6 460 aaPredicted RBP8.49□□□□□ -1.05
LINC00460-202ENST00000439790 BOLA1Q9Y3E2 137 aa8.49□□□□□ -1.05
LINC00460-202ENST00000439790 RGPD3A6NKT7 1758 aaPredicted RBP8.48□□□□□ -1.05
LINC00460-202ENST00000439790 RGPD4Q7Z3J3 1758 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 SSH2Q76I76 1423 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 POTEB3A0JP26 581 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 FAM205CA6NFA0 338 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 REC8O95072 547 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 GTF2E1P29083 439 aaPredicted RBP8.48□□□□□ -1.05
LINC00460-202ENST00000439790 TXNRD1Q16881 649 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 POTEBQ6S5H4 581 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 SPRYD3Q8NCJ5 442 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 INTS4Q96HW7 963 aaKnown RBP8.48□□□□□ -1.05
LINC00460-202ENST00000439790 TIGD1Q96MW7 591 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 SMC4Q9NTJ3 1288 aa8.48□□□□□ -1.05
LINC00460-202ENST00000439790 QRICH2Q9H0J4 1663 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 TRPM3Q9HCF6 1732 aaPredicted RBP8.47□□□□□ -1.05
LINC00460-202ENST00000439790 CRYBG1Q9Y4K1 1723 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 RLBP1P12271 317 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 SSFA2P28290 1259 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 ZNF827Q17R98 1081 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 MCTP1Q6DN14 999 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 KIF2CQ99661 725 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 RBSNQ9H1K0 784 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 YY1AP1Q9H869 796 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 TMEM51Q9NW97 253 aa8.47□□□□□ -1.05
LINC00460-202ENST00000439790 MORC2Q9Y6X9 1032 aaPredicted RBP8.47□□□□□ -1.05
LINC00460-202ENST00000439790 CAVIN2O95810 425 aa8.46□□□□□ -1.06
LINC00460-202ENST00000439790 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.06
LINC00460-202ENST00000439790 RGL3Q3MIN7 710 aa8.46□□□□□ -1.06
LINC00460-202ENST00000439790 MORC1Q86VD1 984 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms