RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 BEND3Q5T5X7 828 aa29.45■■■□□ 2.31
LONRF3-204ENST00000439603 ZBTB7BO15156 539 aaPredicted RBP29.44■■■□□ 2.3
LONRF3-204ENST00000439603 KIF6Q6ZMV9 814 aa29.44■■■□□ 2.3
LONRF3-204ENST00000439603 ARXQ96QS3 562 aa29.44■■■□□ 2.3
LONRF3-204ENST00000439603 HMGB2P26583 209 aaKnown RBP29.44■■■□□ 2.3
LONRF3-204ENST00000439603 AAMPQ13685 434 aa29.44■■■□□ 2.3
LONRF3-204ENST00000439603 METTL22Q9BUU2 404 aaPredicted RBP29.44■■■□□ 2.3
LONRF3-204ENST00000439603 SRCIN1Q9C0H9 1055 aa29.44■■■□□ 2.3
LONRF3-204ENST00000439603 CHMP4BQ9H444 224 aaKnown RBP29.44■■■□□ 2.3
LONRF3-204ENST00000439603 ATP10DQ9P241 1426 aa29.44■■■□□ 2.3
LONRF3-204ENST00000439603 ZBTB3Q9H5J0 574 aa29.43■■■□□ 2.3
LONRF3-204ENST00000439603 PPP4R2Q9NY27 417 aa29.42■■■□□ 2.3
LONRF3-204ENST00000439603 RPS6KA4O75676 772 aa29.42■■■□□ 2.3
LONRF3-204ENST00000439603 NEXNQ0ZGT2 675 aa29.41■■■□□ 2.3
LONRF3-204ENST00000439603 DZIP3Q86Y13 1208 aaKnown RBP29.41■■■□□ 2.3
LONRF3-204ENST00000439603 C4BP0C0L5 1744 aa29.41■■■□□ 2.3
LONRF3-204ENST00000439603 MAP3K15Q6ZN16 1313 aa29.41■■■□□ 2.3
LONRF3-204ENST00000439603 GNPATO15228 680 aa29.4■■■□□ 2.3
LONRF3-204ENST00000439603 LINS1Q8NG48 757 aa29.4■■■□□ 2.3
LONRF3-204ENST00000439603 ZBTB40Q9NUA8 1239 aa29.4■■■□□ 2.3
LONRF3-204ENST00000439603 MYD88Q99836 296 aa29.4■■■□□ 2.3
LONRF3-204ENST00000439603 TBC1D2BQ9UPU7 963 aa29.4■■■□□ 2.3
LONRF3-204ENST00000439603 N4BP2Q86UW6 1770 aaPredicted RBP29.4■■■□□ 2.3
LONRF3-204ENST00000439603 ARFGEF2Q9Y6D5 1785 aa29.39■■■□□ 2.3
LONRF3-204ENST00000439603 COL15A1P39059 1388 aa29.39■■■□□ 2.3
LONRF3-204ENST00000439603 SF3B2Q13435 895 aaKnown RBP29.39■■■□□ 2.3
LONRF3-204ENST00000439603 AK7Q96M32 723 aa29.39■■■□□ 2.3
LONRF3-204ENST00000439603 ALDH1L1O75891 902 aa29.38■■■□□ 2.29
LONRF3-204ENST00000439603 RTCBQ9Y3I0 505 aaKnown RBP29.38■■■□□ 2.29
LONRF3-204ENST00000439603 A0A087WZG4 1122 aa29.38■■■□□ 2.29
LONRF3-204ENST00000439603 ERVV-1B6SEH8 477 aa29.38■■■□□ 2.29
LONRF3-204ENST00000439603 RGPD3A6NKT7 1758 aaPredicted RBP29.38■■■□□ 2.29
LONRF3-204ENST00000439603 RGPD4Q7Z3J3 1758 aa29.38■■■□□ 2.29
LONRF3-204ENST00000439603 NUP188Q5SRE5 1749 aa29.37■■■□□ 2.29
LONRF3-204ENST00000439603 IGKV5-2P06315 115 aa29.37■■■□□ 2.29
LONRF3-204ENST00000439603 CWF19L2Q2TBE0 894 aaKnown RBP29.37■■■□□ 2.29
LONRF3-204ENST00000439603 GIGYF2Q6Y7W6 1299 aaKnown RBP29.36■■■□□ 2.29
LONRF3-204ENST00000439603 MEIS3Q99687 375 aa29.36■■■□□ 2.29
LONRF3-204ENST00000439603 EN1Q05925 392 aaPredicted RBP29.35■■■□□ 2.29
LONRF3-204ENST00000439603 CAMKK2Q96RR4 588 aa29.35■■■□□ 2.29
LONRF3-204ENST00000439603 NEURL1BA8MQ27 555 aa29.34■■■□□ 2.29
LONRF3-204ENST00000439603 HLFQ16534 295 aa29.34■■■□□ 2.29
LONRF3-204ENST00000439603 USP44Q9H0E7 712 aa29.34■■■□□ 2.29
LONRF3-204ENST00000439603 ATP5J2-PTCD1G3V325 749 aa29.34■■■□□ 2.29
LONRF3-204ENST00000439603 TCIRG1Q13488 830 aa29.34■■■□□ 2.29
LONRF3-204ENST00000439603 BAG6P46379 1132 aa29.33■■■□□ 2.29
LONRF3-204ENST00000439603 SMIM5Q71RC9 77 aa29.33■■■□□ 2.29
LONRF3-204ENST00000439603 CAMTA2O94983 1202 aa29.32■■■□□ 2.28
LONRF3-204ENST00000439603 EZH2Q15910 746 aaKnown RBP29.32■■■□□ 2.28
LONRF3-204ENST00000439603 AMIGO3Q86WK7 504 aa29.32■■■□□ 2.28
LONRF3-204ENST00000439603 CCDC125Q86Z20 511 aa29.32■■■□□ 2.28
LONRF3-204ENST00000439603 GNAI3P08754 354 aa29.31■■■□□ 2.28
LONRF3-204ENST00000439603 HSP90AB3PQ58FF7 597 aa29.31■■■□□ 2.28
LONRF3-204ENST00000439603 CCDC136Q96JN2 1154 aa29.31■■■□□ 2.28
LONRF3-204ENST00000439603 IBTKQ9P2D0 1353 aaPredicted RBP29.31■■■□□ 2.28
LONRF3-204ENST00000439603 B4GALNT3Q6L9W6 998 aa29.31■■■□□ 2.28
LONRF3-204ENST00000439603 TRAPPC3LQ5T215 181 aa29.3■■■□□ 2.28
LONRF3-204ENST00000439603 PCDHB15Q9Y5E8 787 aa29.3■■■□□ 2.28
LONRF3-204ENST00000439603 GCKRQ14397 625 aa29.29■■■□□ 2.28
LONRF3-204ENST00000439603 ARHGEF1Q92888 912 aaKnown RBP29.29■■■□□ 2.28
LONRF3-204ENST00000439603 ISCA1Q9BUE6 129 aa29.29■■■□□ 2.28
LONRF3-204ENST00000439603 C9orf78Q9NZ63 289 aaPredicted RBP29.29■■■□□ 2.28
LONRF3-204ENST00000439603 ADRA2BP18089 450 aa29.29■■■□□ 2.28
LONRF3-204ENST00000439603 C1orf115Q9H7X2 142 aa29.29■■■□□ 2.28
LONRF3-204ENST00000439603 PHF14O94880 888 aa29.28■■■□□ 2.28
LONRF3-204ENST00000439603 TRIM28Q13263 835 aaKnown RBP29.28■■■□□ 2.28
LONRF3-204ENST00000439603 NARFQ9UHQ1 456 aa29.28■■■□□ 2.28
LONRF3-204ENST00000439603 NBPF7P0C2Y1 421 aaPredicted RBP29.27■■■□□ 2.28
LONRF3-204ENST00000439603 UBTFL1P0CB47 393 aaPredicted RBP29.27■■■□□ 2.28
LONRF3-204ENST00000439603 DEFB132Q7Z7B7 95 aa29.27■■■□□ 2.28
LONRF3-204ENST00000439603 CCDC191Q8NCU4 936 aa29.27■■■□□ 2.28
LONRF3-204ENST00000439603 AKT1S1Q96B36 256 aa29.27■■■□□ 2.28
LONRF3-204ENST00000439603 GRM8O00222 908 aa29.27■■■□□ 2.28
LONRF3-204ENST00000439603 CWC25Q9NXE8 425 aaPredicted RBP29.27■■■□□ 2.28
LONRF3-204ENST00000439603 UBR3Q6ZT12 1888 aa29.26■■■□□ 2.27
LONRF3-204ENST00000439603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.26■■■□□ 2.27
LONRF3-204ENST00000439603 SSFA2P28290 1259 aa29.26■■■□□ 2.27
LONRF3-204ENST00000439603 CLEC4GQ6UXB4 293 aa29.26■■■□□ 2.27
LONRF3-204ENST00000439603 ZNF652Q9Y2D9 606 aa29.26■■■□□ 2.27
LONRF3-204ENST00000439603 NUP98P52948 1817 aa29.26■■■□□ 2.27
LONRF3-204ENST00000439603 RGL2O15211 777 aa29.25■■■□□ 2.27
LONRF3-204ENST00000439603 ZPR1O75312 459 aa29.25■■■□□ 2.27
LONRF3-204ENST00000439603 GNAI2P04899 355 aa29.25■■■□□ 2.27
LONRF3-204ENST00000439603 RFC4P35249 363 aa29.25■■■□□ 2.27
LONRF3-204ENST00000439603 ZNF827Q17R98 1081 aa29.25■■■□□ 2.27
LONRF3-204ENST00000439603 UTYO14607 1347 aa29.25■■■□□ 2.27
LONRF3-204ENST00000439603 AFDNP55196 1824 aaKnown RBP29.25■■■□□ 2.27
LONRF3-204ENST00000439603 ZNF34Q8IZ26 560 aa29.24■■■□□ 2.27
LONRF3-204ENST00000439603 TFCP2L1Q9NZI6 479 aa29.24■■■□□ 2.27
LONRF3-204ENST00000439603 GPTP24298 496 aa29.23■■■□□ 2.27
LONRF3-204ENST00000439603 USPL1Q5W0Q7 1092 aa29.23■■■□□ 2.27
LONRF3-204ENST00000439603 SRP68Q9UHB9 627 aaKnown RBP29.23■■■□□ 2.27
LONRF3-204ENST00000439603 BCORQ6W2J9 1755 aa29.23■■■□□ 2.27
LONRF3-204ENST00000439603 HDAC5Q9UQL6 1122 aa29.22■■■□□ 2.27
LONRF3-204ENST00000439603 NLRP10Q86W26 655 aa29.21■■■□□ 2.27
LONRF3-204ENST00000439603 BCL2L12Q9HB09 334 aa29.21■■■□□ 2.27
LONRF3-204ENST00000439603 LRRFIP2Q9Y608 721 aaKnown RBP29.21■■■□□ 2.27
LONRF3-204ENST00000439603 USP42Q9H9J4 1324 aaKnown RBP29.21■■■□□ 2.27
LONRF3-204ENST00000439603 ANKRD36CQ5JPF3 1778 aa29.21■■■□□ 2.27
LONRF3-204ENST00000439603 SCN7AQ01118 1682 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms