RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
CBX5-202ENST00000439541 MEIS3Q99687 375 aa12.64□□□□□ -0.39
CBX5-202ENST00000439541 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
CBX5-202ENST00000439541 ATP10DQ9P241 1426 aa12.63□□□□□ -0.39
CBX5-202ENST00000439541 DDX58O95786 925 aaKnown RBP12.63□□□□□ -0.39
CBX5-202ENST00000439541 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
CBX5-202ENST00000439541 AMIGO3Q86WK7 504 aa12.63□□□□□ -0.39
CBX5-202ENST00000439541 CCDC136Q96JN2 1154 aa12.63□□□□□ -0.39
CBX5-202ENST00000439541 ARXQ96QS3 562 aa12.63□□□□□ -0.39
CBX5-202ENST00000439541 ZBTB7BO15156 539 aaPredicted RBP12.62□□□□□ -0.39
CBX5-202ENST00000439541 APBA3O96018 575 aa12.62□□□□□ -0.39
CBX5-202ENST00000439541 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
CBX5-202ENST00000439541 BEND3Q5T5X7 828 aa12.62□□□□□ -0.39
CBX5-202ENST00000439541 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
CBX5-202ENST00000439541 MYD88Q99836 296 aa12.62□□□□□ -0.39
CBX5-202ENST00000439541 COL15A1P39059 1388 aa12.62□□□□□ -0.39
CBX5-202ENST00000439541 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
CBX5-202ENST00000439541 ZBTB40Q9NUA8 1239 aa12.62□□□□□ -0.39
CBX5-202ENST00000439541 PCDHB15Q9Y5E8 787 aa12.62□□□□□ -0.39
CBX5-202ENST00000439541 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
CBX5-202ENST00000439541 IL6STP40189 918 aaPredicted RBP12.61□□□□□ -0.39
CBX5-202ENST00000439541 EIF5P55010 431 aaKnown RBP12.61□□□□□ -0.39
CBX5-202ENST00000439541 PROM2Q8N271 834 aa12.61□□□□□ -0.39
CBX5-202ENST00000439541 PLBD2Q8NHP8 589 aa12.61□□□□□ -0.39
CBX5-202ENST00000439541 SRCIN1Q9C0H9 1055 aa12.61□□□□□ -0.39
CBX5-202ENST00000439541 TBC1D2BQ9UPU7 963 aa12.61□□□□□ -0.39
CBX5-202ENST00000439541 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
CBX5-202ENST00000439541 GNPATO15228 680 aa12.6□□□□□ -0.39
CBX5-202ENST00000439541 TXNRD1Q16881 649 aa12.6□□□□□ -0.39
CBX5-202ENST00000439541 KIF6Q6ZMV9 814 aa12.6□□□□□ -0.39
CBX5-202ENST00000439541 METTL22Q9BUU2 404 aaPredicted RBP12.6□□□□□ -0.39
CBX5-202ENST00000439541 AFDNP55196 1824 aaKnown RBP12.6□□□□□ -0.39
CBX5-202ENST00000439541 KCNA4P22459 653 aa12.6□□□□□ -0.39
CBX5-202ENST00000439541 HLFQ16534 295 aa12.6□□□□□ -0.39
CBX5-202ENST00000439541 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
CBX5-202ENST00000439541 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
CBX5-202ENST00000439541 BCORQ6W2J9 1755 aa12.59□□□□□ -0.39
CBX5-202ENST00000439541 C4AP0C0L4 1744 aa12.59□□□□□ -0.39
CBX5-202ENST00000439541 SCN7AQ01118 1682 aa12.59□□□□□ -0.39
CBX5-202ENST00000439541 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.4
CBX5-202ENST00000439541 PHF14O94880 888 aa12.58□□□□□ -0.4
CBX5-202ENST00000439541 LINS1Q8NG48 757 aa12.58□□□□□ -0.4
CBX5-202ENST00000439541 USP44Q9H0E7 712 aa12.58□□□□□ -0.4
CBX5-202ENST00000439541 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.4
CBX5-202ENST00000439541 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.4
CBX5-202ENST00000439541 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
CBX5-202ENST00000439541 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.4
CBX5-202ENST00000439541 SLC27A3Q5K4L6 730 aa12.58□□□□□ -0.4
CBX5-202ENST00000439541 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.4
CBX5-202ENST00000439541 AK7Q96M32 723 aa12.58□□□□□ -0.4
CBX5-202ENST00000439541 ANKRD36CQ5JPF3 1778 aa12.57□□□□□ -0.4
CBX5-202ENST00000439541 PLSCR1O15162 318 aa12.57□□□□□ -0.4
CBX5-202ENST00000439541 IGHDP01880 384 aa12.57□□□□□ -0.4
CBX5-202ENST00000439541 GPTP24298 496 aa12.57□□□□□ -0.4
CBX5-202ENST00000439541 NPM2Q86SE8 214 aaKnown RBP12.57□□□□□ -0.4
CBX5-202ENST00000439541 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
CBX5-202ENST00000439541 ALDH1L1O75891 902 aa12.56□□□□□ -0.4
CBX5-202ENST00000439541 CAMTA2O94983 1202 aa12.56□□□□□ -0.4
CBX5-202ENST00000439541 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
CBX5-202ENST00000439541 ZNF827Q17R98 1081 aa12.56□□□□□ -0.4
CBX5-202ENST00000439541 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
CBX5-202ENST00000439541 SRP68Q9UHB9 627 aaKnown RBP12.56□□□□□ -0.4
CBX5-202ENST00000439541 LRRFIP2Q9Y608 721 aaKnown RBP12.56□□□□□ -0.4
CBX5-202ENST00000439541 RPS6KA4O75676 772 aa12.55□□□□□ -0.4
CBX5-202ENST00000439541 UBTFL1P0CB47 393 aaPredicted RBP12.55□□□□□ -0.4
CBX5-202ENST00000439541 GCKRQ14397 625 aa12.55□□□□□ -0.4
CBX5-202ENST00000439541 EZH2Q15910 746 aaKnown RBP12.55□□□□□ -0.4
CBX5-202ENST00000439541 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
CBX5-202ENST00000439541 DEFB132Q7Z7B7 95 aa12.55□□□□□ -0.4
CBX5-202ENST00000439541 NUP98P52948 1817 aa12.55□□□□□ -0.4
CBX5-202ENST00000439541 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
CBX5-202ENST00000439541 KDM2BQ8NHM5 1336 aa12.55□□□□□ -0.4
CBX5-202ENST00000439541 GRM8O00222 908 aa12.55□□□□□ -0.4
CBX5-202ENST00000439541 RTL5Q5HYW3 569 aaPredicted RBP12.55□□□□□ -0.4
CBX5-202ENST00000439541 SIRT2Q8IXJ6 389 aa12.55□□□□□ -0.4
CBX5-202ENST00000439541 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
CBX5-202ENST00000439541 UBN2Q6ZU65 1347 aa12.54□□□□□ -0.4
CBX5-202ENST00000439541 GNAI3P08754 354 aa12.54□□□□□ -0.4
CBX5-202ENST00000439541 TCIRG1Q13488 830 aa12.54□□□□□ -0.4
CBX5-202ENST00000439541 AAMPQ13685 434 aa12.54□□□□□ -0.4
CBX5-202ENST00000439541 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
CBX5-202ENST00000439541 SKAP1Q86WV1 359 aa12.54□□□□□ -0.4
CBX5-202ENST00000439541 ISCA1Q9BUE6 129 aa12.54□□□□□ -0.4
CBX5-202ENST00000439541 C9orf78Q9NZ63 289 aaPredicted RBP12.54□□□□□ -0.4
CBX5-202ENST00000439541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
CBX5-202ENST00000439541 GNAI2P04899 355 aa12.53□□□□□ -0.4
CBX5-202ENST00000439541 ANP32AP39687 249 aaKnown RBP12.53□□□□□ -0.4
CBX5-202ENST00000439541 UBE3BQ7Z3V4 1068 aa12.53□□□□□ -0.4
CBX5-202ENST00000439541 ARHGEF1Q92888 912 aaKnown RBP12.53□□□□□ -0.4
CBX5-202ENST00000439541 SUCLG2Q96I99 432 aa12.53□□□□□ -0.4
CBX5-202ENST00000439541 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
CBX5-202ENST00000439541 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
CBX5-202ENST00000439541 A0A087WZG4 1122 aa12.53□□□□□ -0.4
CBX5-202ENST00000439541 ERVV-1B6SEH8 477 aa12.53□□□□□ -0.4
CBX5-202ENST00000439541 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
CBX5-202ENST00000439541 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
CBX5-202ENST00000439541 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
CBX5-202ENST00000439541 ANO8Q9HCE9 1232 aaPredicted RBP12.53□□□□□ -0.4
CBX5-202ENST00000439541 NLRP10Q86W26 655 aa12.52□□□□□ -0.41
CBX5-202ENST00000439541 KAZALD1Q96I82 304 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms