RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PI4KAP2A4QPH2 592 aa16.1■□□□□ 0.17
SCLT1-202ENST00000439369 AIMP1Q12904 312 aaKnown RBP16.1■□□□□ 0.17
SCLT1-202ENST00000439369 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
SCLT1-202ENST00000439369 FTSJ3Q8IY81 847 aaKnown RBP16.1■□□□□ 0.17
SCLT1-202ENST00000439369 PI4KAP1Q8N8J0 262 aa16.1■□□□□ 0.17
SCLT1-202ENST00000439369 DNAAF4Q8WXU2 420 aa16.1■□□□□ 0.17
SCLT1-202ENST00000439369 QSER1Q2KHR3 1735 aa16.1■□□□□ 0.17
SCLT1-202ENST00000439369 N4BP2Q86UW6 1770 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-202ENST00000439369 CCT4P50991 539 aaKnown RBP16.09■□□□□ 0.17
SCLT1-202ENST00000439369 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
SCLT1-202ENST00000439369 TRAPPC3LQ5T215 181 aa16.09■□□□□ 0.17
SCLT1-202ENST00000439369 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
SCLT1-202ENST00000439369 TTLL7Q6ZT98 887 aa16.09■□□□□ 0.17
SCLT1-202ENST00000439369 RIC3Q7Z5B4 369 aa16.09■□□□□ 0.17
SCLT1-202ENST00000439369 STK32BQ9NY57 414 aa16.09■□□□□ 0.17
SCLT1-202ENST00000439369 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
SCLT1-202ENST00000439369 ZNF330Q9Y3S2 320 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-202ENST00000439369 PLIN1O60240 522 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.16
SCLT1-202ENST00000439369 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 NARFQ9UHQ1 456 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 MAP3K2Q9Y2U5 619 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 SCN7AQ01118 1682 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 BCORQ6W2J9 1755 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.16
SCLT1-202ENST00000439369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
SCLT1-202ENST00000439369 CAMTA2O94983 1202 aa16.07■□□□□ 0.16
SCLT1-202ENST00000439369 NEXNQ0ZGT2 675 aa16.07■□□□□ 0.16
SCLT1-202ENST00000439369 SLC15A2Q16348 729 aa16.07■□□□□ 0.16
SCLT1-202ENST00000439369 GIGYF2Q6Y7W6 1299 aaKnown RBP16.07■□□□□ 0.16
SCLT1-202ENST00000439369 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
SCLT1-202ENST00000439369 ARHGEF1Q92888 912 aaKnown RBP16.07■□□□□ 0.16
SCLT1-202ENST00000439369 CHMP4BQ9H444 224 aaKnown RBP16.07■□□□□ 0.16
SCLT1-202ENST00000439369 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
SCLT1-202ENST00000439369 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
SCLT1-202ENST00000439369 ALDH1L1O75891 902 aa16.06■□□□□ 0.16
SCLT1-202ENST00000439369 NEFLP07196 543 aa16.06■□□□□ 0.16
SCLT1-202ENST00000439369 RFC4P35249 363 aa16.06■□□□□ 0.16
SCLT1-202ENST00000439369 TRIM28Q13263 835 aaKnown RBP16.06■□□□□ 0.16
SCLT1-202ENST00000439369 TBC1D2BQ9UPU7 963 aa16.06■□□□□ 0.16
SCLT1-202ENST00000439369 F6X3S4 739 aa16.05■□□□□ 0.16
SCLT1-202ENST00000439369 ZPR1O75312 459 aa16.05■□□□□ 0.16
SCLT1-202ENST00000439369 AAMPQ13685 434 aa16.05■□□□□ 0.16
SCLT1-202ENST00000439369 BEND3Q5T5X7 828 aa16.05■□□□□ 0.16
SCLT1-202ENST00000439369 SRCIN1Q9C0H9 1055 aa16.05■□□□□ 0.16
SCLT1-202ENST00000439369 ZBTB3Q9H5J0 574 aa16.05■□□□□ 0.16
SCLT1-202ENST00000439369 ANO8Q9HCE9 1232 aaPredicted RBP16.05■□□□□ 0.16
SCLT1-202ENST00000439369 RLBP1P12271 317 aa16.04■□□□□ 0.16
SCLT1-202ENST00000439369 TCIRG1Q13488 830 aa16.04■□□□□ 0.16
SCLT1-202ENST00000439369 MVPQ14764 893 aaKnown RBP16.04■□□□□ 0.16
SCLT1-202ENST00000439369 TMEM57Q8N5G2 664 aa16.04■□□□□ 0.16
SCLT1-202ENST00000439369 PANK1Q8TE04 598 aa16.04■□□□□ 0.16
SCLT1-202ENST00000439369 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
SCLT1-202ENST00000439369 ARXQ96QS3 562 aa16.04■□□□□ 0.16
SCLT1-202ENST00000439369 DDX19BQ9UMR2 479 aa16.04■□□□□ 0.16
SCLT1-202ENST00000439369 TUBGCP6Q96RT7 1819 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 PNPLA7Q6ZV29 1317 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 PHF14O94880 888 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 SLC4A10Q6U841 1118 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 AMIGO3Q86WK7 504 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 CCDC191Q8NCU4 936 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 ISCA1Q9BUE6 129 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 TNNQ9UQP3 1299 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
SCLT1-202ENST00000439369 PARP10Q53GL7 1025 aa16.02■□□□□ 0.16
SCLT1-202ENST00000439369 MYD88Q99836 296 aa16.02■□□□□ 0.16
SCLT1-202ENST00000439369 NUP98P52948 1817 aa16.01■□□□□ 0.15
SCLT1-202ENST00000439369 NEURL1BA8MQ27 555 aa16.01■□□□□ 0.15
SCLT1-202ENST00000439369 IGKV5-2P06315 115 aa16.01■□□□□ 0.15
SCLT1-202ENST00000439369 HLFQ16534 295 aa16.01■□□□□ 0.15
SCLT1-202ENST00000439369 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
SCLT1-202ENST00000439369 USPL1Q5W0Q7 1092 aa16.01■□□□□ 0.15
SCLT1-202ENST00000439369 COL23A1Q86Y22 540 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-202ENST00000439369 ITPRIPQ8IWB1 547 aa16.01■□□□□ 0.15
SCLT1-202ENST00000439369 ZNF34Q8IZ26 560 aa16.01■□□□□ 0.15
SCLT1-202ENST00000439369 HDAC5Q9UQL6 1122 aa16.01■□□□□ 0.15
SCLT1-202ENST00000439369 SLC16A10Q8TF71 515 aa16■□□□□ 0.15
SCLT1-202ENST00000439369 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
SCLT1-202ENST00000439369 CWC25Q9NXE8 425 aaPredicted RBP16■□□□□ 0.15
SCLT1-202ENST00000439369 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
SCLT1-202ENST00000439369 COG6Q9Y2V7 657 aa16■□□□□ 0.15
SCLT1-202ENST00000439369 UTYO14607 1347 aa15.99■□□□□ 0.15
SCLT1-202ENST00000439369 GNAI3P08754 354 aa15.99■□□□□ 0.15
SCLT1-202ENST00000439369 GYS1P13807 737 aa15.99■□□□□ 0.15
SCLT1-202ENST00000439369 GCKRQ14397 625 aa15.99■□□□□ 0.15
SCLT1-202ENST00000439369 NLGN1Q8N2Q7 840 aa15.99■□□□□ 0.15
SCLT1-202ENST00000439369 ZBTB7BO15156 539 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-202ENST00000439369 CWF19L2Q2TBE0 894 aaKnown RBP15.98■□□□□ 0.15
SCLT1-202ENST00000439369 SMIM5Q71RC9 77 aa15.98■□□□□ 0.15
SCLT1-202ENST00000439369 NLRP10Q86W26 655 aa15.98■□□□□ 0.15
SCLT1-202ENST00000439369 CRBNQ96SW2 442 aa15.98■□□□□ 0.15
SCLT1-202ENST00000439369 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
SCLT1-202ENST00000439369 ATP5J2-PTCD1G3V325 749 aa15.97■□□□□ 0.15
SCLT1-202ENST00000439369 GRM8O00222 908 aa15.97■□□□□ 0.15
SCLT1-202ENST00000439369 PPP1R42Q7Z4L9 355 aa15.97■□□□□ 0.15
SCLT1-202ENST00000439369 USP44Q9H0E7 712 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms