RNA–Protein interactions for RNA: ENST00000439264.1

SFTPA1-205, Transcript of surfactant protein A1, humanhuman

TSL 1 (best)

Gene SFTPA1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-205ENST00000439264 SNED1Q8TER0 1413 aa19.4■□□□□ 0.7
SFTPA1-205ENST00000439264 FOXN1O15353 648 aa19.39■□□□□ 0.69
SFTPA1-205ENST00000439264 GNAT3A8MTJ3 354 aa19.38■□□□□ 0.69
SFTPA1-205ENST00000439264 CNBD1Q8NA66 436 aa19.38■□□□□ 0.69
SFTPA1-205ENST00000439264 TEX13AQ9BXU3 409 aaPredicted RBP19.38■□□□□ 0.69
SFTPA1-205ENST00000439264 PCGF6Q9BYE7 350 aa19.38■□□□□ 0.69
SFTPA1-205ENST00000439264 PRAMEF22A3QJZ6 481 aa19.37■□□□□ 0.69
SFTPA1-205ENST00000439264 KLRG2A4D1S0 409 aaPredicted RBP19.37■□□□□ 0.69
SFTPA1-205ENST00000439264 ITGBL1O95965 494 aaPredicted RBP19.37■□□□□ 0.69
SFTPA1-205ENST00000439264 CNKSR1Q969H4 720 aa19.37■□□□□ 0.69
SFTPA1-205ENST00000439264 SETDB2Q96T68 719 aa19.37■□□□□ 0.69
SFTPA1-205ENST00000439264 TAF1DQ9H5J8 278 aaPredicted RBP19.37■□□□□ 0.69
SFTPA1-205ENST00000439264 NPC1L1Q9UHC9 1359 aa19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 PIP4K2AP48426 406 aaPredicted RBP19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 TEFQ10587 303 aa19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 MASTLQ96GX5 879 aa19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 PHACTR3Q96KR7 559 aa19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 FMNL2Q96PY5 1086 aa19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 ZNF330Q9Y3S2 320 aaPredicted RBP19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 USP16Q9Y5T5 823 aa19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 COL4A5P29400 1685 aa19.36■□□□□ 0.69
SFTPA1-205ENST00000439264 LTBP1Q14766 1721 aa19.35■□□□□ 0.69
SFTPA1-205ENST00000439264 OLFM4Q6UX06 510 aa19.35■□□□□ 0.69
SFTPA1-205ENST00000439264 LDHDQ86WU2 507 aa19.35■□□□□ 0.69
SFTPA1-205ENST00000439264 GAS2L2Q8NHY3 880 aa19.35■□□□□ 0.69
SFTPA1-205ENST00000439264 DZIP3Q86Y13 1208 aaKnown RBP19.34■□□□□ 0.69
SFTPA1-205ENST00000439264 THSD7BQ9C0I4 1608 aa19.33■□□□□ 0.69
SFTPA1-205ENST00000439264 LAMB4A4D0S4 1761 aa19.33■□□□□ 0.68
SFTPA1-205ENST00000439264 NBPF26B4DH59 902 aa19.32■□□□□ 0.68
SFTPA1-205ENST00000439264 VEGFBP49765 207 aa19.32■□□□□ 0.68
SFTPA1-205ENST00000439264 ST5P78524 1137 aa19.32■□□□□ 0.68
SFTPA1-205ENST00000439264 NBPF10Q6P3W6 841 aaKnown RBP19.32■□□□□ 0.68
SFTPA1-205ENST00000439264 NBPF15Q8N660 670 aa19.32■□□□□ 0.68
SFTPA1-205ENST00000439264 RSPH6AQ9H0K4 717 aa19.32■□□□□ 0.68
SFTPA1-205ENST00000439264 PRDM10Q9NQV6 1147 aa19.32■□□□□ 0.68
SFTPA1-205ENST00000439264 FKBP4Q02790 459 aaKnown RBP eCLIP19.31■□□□□ 0.68
SFTPA1-205ENST00000439264 CCDC93Q567U6 631 aa19.31■□□□□ 0.68
SFTPA1-205ENST00000439264 SOGA3Q5TF21 947 aa19.31■□□□□ 0.68
SFTPA1-205ENST00000439264 CLEC4GQ6UXB4 293 aa19.31■□□□□ 0.68
SFTPA1-205ENST00000439264 IQCA1LA6NCM1 817 aa19.3■□□□□ 0.68
SFTPA1-205ENST00000439264 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
SFTPA1-205ENST00000439264 ZNF277Q9NRM2 450 aaPredicted RBP19.3■□□□□ 0.68
SFTPA1-205ENST00000439264 NUP98P52948 1817 aa19.3■□□□□ 0.68
SFTPA1-205ENST00000439264 BTBD11A6QL63 1104 aa19.29■□□□□ 0.68
SFTPA1-205ENST00000439264 NPR1P16066 1061 aa19.29■□□□□ 0.68
SFTPA1-205ENST00000439264 WBP1LQ9NX94 342 aa19.29■□□□□ 0.68
SFTPA1-205ENST00000439264 FZD9O00144 591 aa19.28■□□□□ 0.68
SFTPA1-205ENST00000439264 NBPF5PQ86XG9 351 aaPredicted RBP19.28■□□□□ 0.68
SFTPA1-205ENST00000439264 KDM3BQ7LBC6 1761 aa19.27■□□□□ 0.68
SFTPA1-205ENST00000439264 TMEM88BA6NKF7 163 aa19.27■□□□□ 0.68
SFTPA1-205ENST00000439264 RGL2O15211 777 aa19.27■□□□□ 0.68
SFTPA1-205ENST00000439264 PRKAR2BP31323 418 aa19.27■□□□□ 0.68
SFTPA1-205ENST00000439264 SLC51AQ86UW1 340 aa19.27■□□□□ 0.68
SFTPA1-205ENST00000439264 ABCC12Q96J65 1359 aa19.27■□□□□ 0.68
SFTPA1-205ENST00000439264 DLG5Q8TDM6 1919 aa19.26■□□□□ 0.67
SFTPA1-205ENST00000439264 RASSF10A6NK89 507 aa19.26■□□□□ 0.67
SFTPA1-205ENST00000439264 HLFQ16534 295 aa19.26■□□□□ 0.67
SFTPA1-205ENST00000439264 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
SFTPA1-205ENST00000439264 EPHX2P34913 555 aa19.25■□□□□ 0.67
SFTPA1-205ENST00000439264 CTCFP49711 727 aaPredicted RBP19.25■□□□□ 0.67
SFTPA1-205ENST00000439264 HACL1Q9UJ83 578 aa19.25■□□□□ 0.67
SFTPA1-205ENST00000439264 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
SFTPA1-205ENST00000439264 IARSP41252 1262 aaKnown RBP19.24■□□□□ 0.67
SFTPA1-205ENST00000439264 CRY2Q49AN0 593 aa19.24■□□□□ 0.67
SFTPA1-205ENST00000439264 MAP1SQ66K74 1059 aaPredicted RBP19.24■□□□□ 0.67
SFTPA1-205ENST00000439264 MCM10Q7L590 875 aa19.24■□□□□ 0.67
SFTPA1-205ENST00000439264 NIP7Q9Y221 180 aaKnown RBP eCLIP19.24■□□□□ 0.67
SFTPA1-205ENST00000439264 TRPM7Q96QT4 1865 aa19.24■□□□□ 0.67
SFTPA1-205ENST00000439264 NPHP1O15259 732 aa19.23■□□□□ 0.67
SFTPA1-205ENST00000439264 HSPA8P11142 646 aaKnown RBP19.23■□□□□ 0.67
SFTPA1-205ENST00000439264 LBX1P52954 281 aa19.23■□□□□ 0.67
SFTPA1-205ENST00000439264 EAPPQ56P03 285 aaPredicted RBP19.23■□□□□ 0.67
SFTPA1-205ENST00000439264 SYNE4Q8N205 404 aa19.23■□□□□ 0.67
SFTPA1-205ENST00000439264 DCTN1Q14203 1278 aa19.22■□□□□ 0.67
SFTPA1-205ENST00000439264 TPTE2Q6XPS3 522 aa19.22■□□□□ 0.67
SFTPA1-205ENST00000439264 RTKN2Q8IZC4 609 aa19.22■□□□□ 0.67
SFTPA1-205ENST00000439264 CNTROBQ8N137 903 aa19.22■□□□□ 0.67
SFTPA1-205ENST00000439264 ZNF652Q9Y2D9 606 aa19.22■□□□□ 0.67
SFTPA1-205ENST00000439264 TNRC18O15417 2968 aaPredicted RBP19.22■□□□□ 0.67
SFTPA1-205ENST00000439264 FMR1Q06787 632 aaKnown RBP eCLIP19.21■□□□□ 0.67
SFTPA1-205ENST00000439264 RIC1Q4ADV7 1423 aa19.21■□□□□ 0.67
SFTPA1-205ENST00000439264 GPC2Q8N158 579 aa19.21■□□□□ 0.67
SFTPA1-205ENST00000439264 PSMD1Q99460 953 aa19.21■□□□□ 0.67
SFTPA1-205ENST00000439264 FAM177BA6PVY3 158 aa19.2■□□□□ 0.66
SFTPA1-205ENST00000439264 NPM2Q86SE8 214 aaKnown RBP19.2■□□□□ 0.66
SFTPA1-205ENST00000439264 SCNN1DP51172 638 aa19.19■□□□□ 0.66
SFTPA1-205ENST00000439264 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
SFTPA1-205ENST00000439264 PNMA8AQ86V59 439 aaPredicted RBP19.19■□□□□ 0.66
SFTPA1-205ENST00000439264 WDR33Q9C0J8 1336 aaKnown RBP19.19■□□□□ 0.66
SFTPA1-205ENST00000439264 DEFB115Q30KQ5 88 aa19.18■□□□□ 0.66
SFTPA1-205ENST00000439264 CLEC11AQ9Y240 323 aa19.18■□□□□ 0.66
SFTPA1-205ENST00000439264 ALDH1B1P30837 517 aa19.17■□□□□ 0.66
SFTPA1-205ENST00000439264 HOXA10P31260 410 aaPredicted RBP19.17■□□□□ 0.66
SFTPA1-205ENST00000439264 NUTM1Q86Y26 1132 aa19.17■□□□□ 0.66
SFTPA1-205ENST00000439264 AIDAQ96BJ3 306 aa19.17■□□□□ 0.66
SFTPA1-205ENST00000439264 DDX21Q9NR30 783 aaKnown RBP eCLIP19.17■□□□□ 0.66
SFTPA1-205ENST00000439264 UBN2Q6ZU65 1347 aa19.17■□□□□ 0.66
SFTPA1-205ENST00000439264 LAMB2P55268 1798 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms