RNA–Protein interactions for RNA: ENST00000439200.5

CHEK2-216, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 906 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-216ENST00000439200 PHACTR3Q96KR7 559 aa17.78■□□□□ 0.44
CHEK2-216ENST00000439200 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
CHEK2-216ENST00000439200 ST5P78524 1137 aa17.77■□□□□ 0.44
CHEK2-216ENST00000439200 PRPF40BQ6NWY9 871 aaKnown RBP17.77■□□□□ 0.44
CHEK2-216ENST00000439200 DZIP3Q86Y13 1208 aaKnown RBP17.77■□□□□ 0.44
CHEK2-216ENST00000439200 LTBP3Q9NS15 1303 aa17.76■□□□□ 0.43
CHEK2-216ENST00000439200 PRAMEF22A3QJZ6 481 aa17.76■□□□□ 0.43
CHEK2-216ENST00000439200 SRGNP10124 158 aa17.76■□□□□ 0.43
CHEK2-216ENST00000439200 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
CHEK2-216ENST00000439200 STYK1Q6J9G0 422 aa17.76■□□□□ 0.43
CHEK2-216ENST00000439200 CNKSR1Q969H4 720 aa17.76■□□□□ 0.43
CHEK2-216ENST00000439200 RSPH6AQ9H0K4 717 aa17.76■□□□□ 0.43
CHEK2-216ENST00000439200 ARFGEF2Q9Y6D5 1785 aa17.76■□□□□ 0.43
CHEK2-216ENST00000439200 DDNO94850 711 aaPredicted RBP17.75■□□□□ 0.43
CHEK2-216ENST00000439200 POTEIP0CG38 1075 aa17.75■□□□□ 0.43
CHEK2-216ENST00000439200 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
CHEK2-216ENST00000439200 MASTLQ96GX5 879 aa17.75■□□□□ 0.43
CHEK2-216ENST00000439200 USP16Q9Y5T5 823 aa17.75■□□□□ 0.43
CHEK2-216ENST00000439200 CHADLQ6NUI6 762 aa17.73■□□□□ 0.43
CHEK2-216ENST00000439200 NBPF5PQ86XG9 351 aaPredicted RBP17.73■□□□□ 0.43
CHEK2-216ENST00000439200 SOGA3Q5TF21 947 aa17.72■□□□□ 0.43
CHEK2-216ENST00000439200 MCM10Q7L590 875 aa17.72■□□□□ 0.43
CHEK2-216ENST00000439200 CFAP53Q96M91 514 aa17.71■□□□□ 0.43
CHEK2-216ENST00000439200 CREBZFQ9NS37 354 aa17.71■□□□□ 0.43
CHEK2-216ENST00000439200 MKRN1Q9UHC7 482 aaKnown RBP17.71■□□□□ 0.43
CHEK2-216ENST00000439200 CLEC4GQ6UXB4 293 aa17.7■□□□□ 0.42
CHEK2-216ENST00000439200 C7orf43Q8WVR3 580 aa17.7■□□□□ 0.42
CHEK2-216ENST00000439200 ZNF652Q9Y2D9 606 aa17.7■□□□□ 0.42
CHEK2-216ENST00000439200 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
CHEK2-216ENST00000439200 SNRPA1P09661 255 aaKnown RBP17.69■□□□□ 0.42
CHEK2-216ENST00000439200 DCTN1Q14203 1278 aa17.69■□□□□ 0.42
CHEK2-216ENST00000439200 CCDC93Q567U6 631 aa17.69■□□□□ 0.42
CHEK2-216ENST00000439200 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
CHEK2-216ENST00000439200 RTF1Q92541 710 aaKnown RBP17.69■□□□□ 0.42
CHEK2-216ENST00000439200 NBPF26B4DH59 902 aa17.68■□□□□ 0.42
CHEK2-216ENST00000439200 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
CHEK2-216ENST00000439200 NPR1P16066 1061 aa17.68■□□□□ 0.42
CHEK2-216ENST00000439200 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHEK2-216ENST00000439200 NBPF10Q6P3W6 841 aaKnown RBP17.68■□□□□ 0.42
CHEK2-216ENST00000439200 NBPF15Q8N660 670 aa17.68■□□□□ 0.42
CHEK2-216ENST00000439200 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
CHEK2-216ENST00000439200 NIP7Q9Y221 180 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHEK2-216ENST00000439200 NUDCQ9Y266 331 aa17.68■□□□□ 0.42
CHEK2-216ENST00000439200 ZNF541Q9H0D2 1346 aa17.68■□□□□ 0.42
CHEK2-216ENST00000439200 IQCA1LA6NCM1 817 aa17.67■□□□□ 0.42
CHEK2-216ENST00000439200 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHEK2-216ENST00000439200 L3MBTL3Q96JM7 780 aaPredicted RBP17.67■□□□□ 0.42
CHEK2-216ENST00000439200 TAF1DQ9H5J8 278 aaPredicted RBP17.67■□□□□ 0.42
CHEK2-216ENST00000439200 KLRG2A4D1S0 409 aaPredicted RBP17.66■□□□□ 0.42
CHEK2-216ENST00000439200 LDHDQ86WU2 507 aa17.66■□□□□ 0.42
CHEK2-216ENST00000439200 SCN4AP35499 1836 aa17.65■□□□□ 0.42
CHEK2-216ENST00000439200 HLFQ16534 295 aa17.65■□□□□ 0.42
CHEK2-216ENST00000439200 EAPPQ56P03 285 aaPredicted RBP17.65■□□□□ 0.42
CHEK2-216ENST00000439200 TPTE2Q6XPS3 522 aa17.65■□□□□ 0.42
CHEK2-216ENST00000439200 PASKQ96RG2 1323 aa17.65■□□□□ 0.42
CHEK2-216ENST00000439200 CNTNAP1P78357 1384 aa17.65■□□□□ 0.42
CHEK2-216ENST00000439200 PPP2R1AP30153 589 aa17.64■□□□□ 0.41
CHEK2-216ENST00000439200 MIS18AQ9NYP9 233 aa17.64■□□□□ 0.41
CHEK2-216ENST00000439200 LAMB4A4D0S4 1761 aa17.63■□□□□ 0.41
CHEK2-216ENST00000439200 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
CHEK2-216ENST00000439200 HACL1Q9UJ83 578 aa17.62■□□□□ 0.41
CHEK2-216ENST00000439200 ABCC12Q96J65 1359 aa17.62■□□□□ 0.41
CHEK2-216ENST00000439200 ADAMTSL1Q8N6G6 1762 aa17.61■□□□□ 0.41
CHEK2-216ENST00000439200 RGL2O15211 777 aa17.61■□□□□ 0.41
CHEK2-216ENST00000439200 FOXN1O15353 648 aa17.61■□□□□ 0.41
CHEK2-216ENST00000439200 HTATSF1O43719 755 aaKnown RBP17.61■□□□□ 0.41
CHEK2-216ENST00000439200 ITGBL1O95965 494 aaPredicted RBP17.61■□□□□ 0.41
CHEK2-216ENST00000439200 GTF2E1P29083 439 aaPredicted RBP17.61■□□□□ 0.41
CHEK2-216ENST00000439200 TAF7Q15545 349 aaPredicted RBP17.61■□□□□ 0.41
CHEK2-216ENST00000439200 SYNE4Q8N205 404 aa17.61■□□□□ 0.41
CHEK2-216ENST00000439200 NGEFQ8N5V2 710 aa17.61■□□□□ 0.41
CHEK2-216ENST00000439200 CLEC11AQ9Y240 323 aa17.61■□□□□ 0.41
CHEK2-216ENST00000439200 RNF123Q5XPI4 1314 aa17.61■□□□□ 0.41
CHEK2-216ENST00000439200 TMEM88BA6NKF7 163 aa17.6■□□□□ 0.41
CHEK2-216ENST00000439200 ALDH1B1P30837 517 aa17.6■□□□□ 0.41
CHEK2-216ENST00000439200 EPHX2P34913 555 aa17.6■□□□□ 0.41
CHEK2-216ENST00000439200 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
CHEK2-216ENST00000439200 VEGFBP49765 207 aa17.6■□□□□ 0.41
CHEK2-216ENST00000439200 NUTM1Q86Y26 1132 aa17.6■□□□□ 0.41
CHEK2-216ENST00000439200 SNED1Q8TER0 1413 aa17.6■□□□□ 0.41
CHEK2-216ENST00000439200 FZD9O00144 591 aa17.59■□□□□ 0.41
CHEK2-216ENST00000439200 KDM3BQ7LBC6 1761 aa17.58■□□□□ 0.41
CHEK2-216ENST00000439200 COL4A5P29400 1685 aa17.58■□□□□ 0.41
CHEK2-216ENST00000439200 MAP1SQ66K74 1059 aaPredicted RBP17.58■□□□□ 0.4
CHEK2-216ENST00000439200 CRY2Q49AN0 593 aa17.57■□□□□ 0.4
CHEK2-216ENST00000439200 TTLL7Q6ZT98 887 aa17.57■□□□□ 0.4
CHEK2-216ENST00000439200 SLC51AQ86UW1 340 aa17.57■□□□□ 0.4
CHEK2-216ENST00000439200 NYXQ9GZU5 481 aa17.57■□□□□ 0.4
CHEK2-216ENST00000439200 NUP98P52948 1817 aa17.56■□□□□ 0.4
CHEK2-216ENST00000439200 MAP3K15Q6ZN16 1313 aa17.56■□□□□ 0.4
CHEK2-216ENST00000439200 GPTP24298 496 aa17.56■□□□□ 0.4
CHEK2-216ENST00000439200 PNMA8AQ86V59 439 aaPredicted RBP17.56■□□□□ 0.4
CHEK2-216ENST00000439200 GPC2Q8N158 579 aa17.56■□□□□ 0.4
CHEK2-216ENST00000439200 AIDAQ96BJ3 306 aa17.56■□□□□ 0.4
CHEK2-216ENST00000439200 PSMD1Q99460 953 aa17.56■□□□□ 0.4
CHEK2-216ENST00000439200 RRP7AQ9Y3A4 280 aaKnown RBP17.56■□□□□ 0.4
CHEK2-216ENST00000439200 DLG5Q8TDM6 1919 aa17.56■□□□□ 0.4
CHEK2-216ENST00000439200 UBN2Q6ZU65 1347 aa17.55■□□□□ 0.4
CHEK2-216ENST00000439200 ERVV-1B6SEH8 477 aa17.55■□□□□ 0.4
CHEK2-216ENST00000439200 MYL6BP14649 208 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms