RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 OLFM4Q6UX06 510 aa14.52□□□□□ -0.09
TCOF1-205ENST00000439160 FAM43AQ8N2R8 423 aa14.52□□□□□ -0.09
TCOF1-205ENST00000439160 C8orf37Q96NL8 207 aa14.52□□□□□ -0.09
TCOF1-205ENST00000439160 ZMYM4Q5VZL5 1548 aa14.52□□□□□ -0.09
TCOF1-205ENST00000439160 LETM1O95202 739 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-205ENST00000439160 BTG4Q9NY30 223 aa14.51□□□□□ -0.09
TCOF1-205ENST00000439160 BLMP54132 1417 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-205ENST00000439160 SEC24BO95487 1268 aa14.51□□□□□ -0.09
TCOF1-205ENST00000439160 JMYQ8N9B5 988 aa14.51□□□□□ -0.09
TCOF1-205ENST00000439160 TNMDQ9H2S6 317 aa14.51□□□□□ -0.09
TCOF1-205ENST00000439160 PRDM15P57071 1507 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-205ENST00000439160 ATP6V1AP38606 617 aa14.51□□□□□ -0.09
TCOF1-205ENST00000439160 HOMER1Q86YM7 354 aa14.51□□□□□ -0.09
TCOF1-205ENST00000439160 CCDC82Q8N4S0 544 aa14.51□□□□□ -0.09
TCOF1-205ENST00000439160 TNPO1Q92973 898 aaKnown RBP14.51□□□□□ -0.09
TCOF1-205ENST00000439160 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
TCOF1-205ENST00000439160 FAM13BQ9NYF5 915 aa14.51□□□□□ -0.09
TCOF1-205ENST00000439160 KDM5DQ9BY66 1539 aa14.5□□□□□ -0.09
TCOF1-205ENST00000439160 HAND2P61296 217 aa14.5□□□□□ -0.09
TCOF1-205ENST00000439160 ZNF790Q6PG37 636 aa14.5□□□□□ -0.09
TCOF1-205ENST00000439160 ZSCAN29Q8IWY8 852 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-205ENST00000439160 ZNF213O14771 459 aa14.5□□□□□ -0.09
TCOF1-205ENST00000439160 PPFIA3O75145 1194 aa14.5□□□□□ -0.09
TCOF1-205ENST00000439160 CDKL5O76039 1030 aa14.5□□□□□ -0.09
TCOF1-205ENST00000439160 DDX21Q9NR30 783 aaKnown RBP eCLIP14.5□□□□□ -0.09
TCOF1-205ENST00000439160 TCEANC2Q96MN5 208 aa14.5□□□□□ -0.09
TCOF1-205ENST00000439160 GRPEL1Q9HAV7 217 aa14.5□□□□□ -0.09
TCOF1-205ENST00000439160 KDM5CP41229 1560 aa14.49□□□□□ -0.09
TCOF1-205ENST00000439160 GUCY1B3Q02153 619 aa14.49□□□□□ -0.09
TCOF1-205ENST00000439160 CFAP45Q9UL16 551 aa14.49□□□□□ -0.09
TCOF1-205ENST00000439160 IPO7O95373 1038 aaKnown RBP14.49□□□□□ -0.09
TCOF1-205ENST00000439160 CCDC192P0DO97 292 aa14.49□□□□□ -0.09
TCOF1-205ENST00000439160 PLEKHM2Q8IWE5 1019 aa14.49□□□□□ -0.09
TCOF1-205ENST00000439160 SH2B1Q9NRF2 756 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-205ENST00000439160 CCT2P78371 535 aaKnown RBP14.48□□□□□ -0.09
TCOF1-205ENST00000439160 CCDC43Q96MW1 224 aaKnown RBP14.48□□□□□ -0.09
TCOF1-205ENST00000439160 ESYT1Q9BSJ8 1104 aa14.48□□□□□ -0.09
TCOF1-205ENST00000439160 GDPD2Q9HCC8 539 aa14.48□□□□□ -0.09
TCOF1-205ENST00000439160 OTUD7AQ8TE49 926 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-205ENST00000439160 CDC42BPAQ5VT25 1732 aa14.48□□□□□ -0.09
TCOF1-205ENST00000439160 CDC5LQ99459 802 aaKnown RBP14.48□□□□□ -0.09
TCOF1-205ENST00000439160 TSPOAP1O95153 1857 aa14.48□□□□□ -0.09
TCOF1-205ENST00000439160 SYCE3A1L190 88 aa14.47□□□□□ -0.09
TCOF1-205ENST00000439160 DZIP1Q86YF9 867 aaKnown RBP14.47□□□□□ -0.09
TCOF1-205ENST00000439160 SPC24Q8NBT2 197 aa14.47□□□□□ -0.09
TCOF1-205ENST00000439160 IQSEC3Q9UPP2 1182 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-205ENST00000439160 RNF123Q5XPI4 1314 aa14.47□□□□□ -0.09
TCOF1-205ENST00000439160 CFAP74Q9C0B2 1584 aa14.47□□□□□ -0.09
TCOF1-205ENST00000439160 NOC3LQ8WTT2 800 aaKnown RBP14.47□□□□□ -0.09
TCOF1-205ENST00000439160 AK7Q96M32 723 aa14.47□□□□□ -0.09
TCOF1-205ENST00000439160 SMC2O95347 1197 aa14.46□□□□□ -0.09
TCOF1-205ENST00000439160 USP5P45974 858 aa14.46□□□□□ -0.09
TCOF1-205ENST00000439160 PDILTQ8N807 584 aa14.46□□□□□ -0.09
TCOF1-205ENST00000439160 RANBP6O60518 1105 aaKnown RBP14.46□□□□□ -0.09
TCOF1-205ENST00000439160 BCL11BQ9C0K0 894 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-205ENST00000439160 SOS1Q07889 1333 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-205ENST00000439160 ATP2B3Q16720 1220 aa14.46□□□□□ -0.09
TCOF1-205ENST00000439160 CCDC39Q9UFE4 941 aa14.46□□□□□ -0.09
TCOF1-205ENST00000439160 EFCAB6Q5THR3 1501 aa14.46□□□□□ -0.09
TCOF1-205ENST00000439160 USP19O94966 1318 aa14.46□□□□□ -0.1
TCOF1-205ENST00000439160 SLAIN2Q9P270 581 aa14.46□□□□□ -0.1
TCOF1-205ENST00000439160 KDM5AP29375 1690 aaKnown RBP14.46□□□□□ -0.1
TCOF1-205ENST00000439160 ROBO2Q9HCK4 1378 aa14.46□□□□□ -0.1
TCOF1-205ENST00000439160 MYOM2P54296 1465 aa14.46□□□□□ -0.1
TCOF1-205ENST00000439160 HMGB1P09429 215 aaKnown RBP14.45□□□□□ -0.1
TCOF1-205ENST00000439160 TXLNAP40222 546 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 NBPF5PQ86XG9 351 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-205ENST00000439160 RPGRQ92834 1020 aaKnown RBP14.45□□□□□ -0.1
TCOF1-205ENST00000439160 NUP62CLQ9H1M0 184 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 BICC1Q9H694 974 aaKnown RBP14.45□□□□□ -0.1
TCOF1-205ENST00000439160 NIP7Q9Y221 180 aaKnown RBP eCLIP14.45□□□□□ -0.1
TCOF1-205ENST00000439160 PCDH11XQ9BZA7 1347 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 PCDH11YQ9BZA8 1340 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 RFC4P35249 363 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 DZIP3Q86Y13 1208 aaKnown RBP14.45□□□□□ -0.1
TCOF1-205ENST00000439160 RAB11FIP4Q86YS3 637 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-205ENST00000439160 IL15P40933 162 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-205ENST00000439160 IL17REQ8NFR9 667 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 TMX3Q96JJ7 454 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 PLXNC1O60486 1568 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 C6orf229H3BNL8 230 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 CAMK4Q16566 473 aa14.45□□□□□ -0.1
TCOF1-205ENST00000439160 NEK1Q96PY6 1258 aa14.44□□□□□ -0.1
TCOF1-205ENST00000439160 LRRC2Q9BYS8 371 aa14.44□□□□□ -0.1
TCOF1-205ENST00000439160 MKNK2Q9HBH9 465 aa14.44□□□□□ -0.1
TCOF1-205ENST00000439160 INSRP06213 1382 aa14.44□□□□□ -0.1
TCOF1-205ENST00000439160 POLR3DP05423 398 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-205ENST00000439160 GOLGA8BA8MQT2 603 aa14.44□□□□□ -0.1
TCOF1-205ENST00000439160 IFIT3O14879 490 aaKnown RBP14.44□□□□□ -0.1
TCOF1-205ENST00000439160 SOGA3Q5TF21 947 aa14.44□□□□□ -0.1
TCOF1-205ENST00000439160 HELBQ8NG08 1087 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-205ENST00000439160 KLHDC4Q8TBB5 520 aa14.44□□□□□ -0.1
TCOF1-205ENST00000439160 RBM8AQ9Y5S9 174 aaKnown RBP14.44□□□□□ -0.1
TCOF1-205ENST00000439160 PRR36Q9H6K5 1346 aa14.44□□□□□ -0.1
TCOF1-205ENST00000439160 NBPF7P0C2Y1 421 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-205ENST00000439160 NECAB1Q8N987 351 aa14.43□□□□□ -0.1
TCOF1-205ENST00000439160 ZNF496Q96IT1 587 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-205ENST00000439160 C8orf76Q96K31 380 aa14.43□□□□□ -0.1
TCOF1-205ENST00000439160 CEP89Q96ST8 783 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms