RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 KIF13BQ9NQT8 1826 aa21.8■■□□□ 1.08
TARDBP-203ENST00000439080 CCDC30Q5VVM6 783 aa21.79■■□□□ 1.08
TARDBP-203ENST00000439080 TTLL7Q6ZT98 887 aa21.79■■□□□ 1.08
TARDBP-203ENST00000439080 MMP10P09238 476 aa21.78■■□□□ 1.08
TARDBP-203ENST00000439080 CHMP4AQ9BY43 222 aa21.78■■□□□ 1.08
TARDBP-203ENST00000439080 PPP1R1BQ9UD71 204 aaPredicted RBP21.78■■□□□ 1.08
TARDBP-203ENST00000439080 VAMP4O75379 141 aa21.77■■□□□ 1.08
TARDBP-203ENST00000439080 TRMT2AQ8IZ69 625 aaKnown RBP21.77■■□□□ 1.08
TARDBP-203ENST00000439080 MAP3K15Q6ZN16 1313 aa21.77■■□□□ 1.08
TARDBP-203ENST00000439080 XAGE3Q8WTP9 111 aa21.76■■□□□ 1.07
TARDBP-203ENST00000439080 STK31Q9BXU1 1019 aa21.76■■□□□ 1.07
TARDBP-203ENST00000439080 HYPKQ9NX55 129 aa21.76■■□□□ 1.07
TARDBP-203ENST00000439080 ZNF652Q9Y2D9 606 aa21.76■■□□□ 1.07
TARDBP-203ENST00000439080 TCERG1O14776 1098 aaKnown RBP21.75■■□□□ 1.07
TARDBP-203ENST00000439080 DDR1Q08345 913 aa21.75■■□□□ 1.07
TARDBP-203ENST00000439080 AIMP1Q12904 312 aaKnown RBP21.75■■□□□ 1.07
TARDBP-203ENST00000439080 COPS6Q7L5N1 327 aa21.75■■□□□ 1.07
TARDBP-203ENST00000439080 ZBTB3Q9H5J0 574 aa21.75■■□□□ 1.07
TARDBP-203ENST00000439080 ATP10DQ9P241 1426 aa21.75■■□□□ 1.07
TARDBP-203ENST00000439080 NFIXQ14938 502 aa21.74■■□□□ 1.07
TARDBP-203ENST00000439080 TBC1D9BQ66K14 1250 aa21.74■■□□□ 1.07
TARDBP-203ENST00000439080 KIAA1551Q9HCM1 1747 aa21.74■■□□□ 1.07
TARDBP-203ENST00000439080 CARMIL3Q8ND23 1372 aa21.74■■□□□ 1.07
TARDBP-203ENST00000439080 ERVV-1B6SEH8 477 aa21.74■■□□□ 1.07
TARDBP-203ENST00000439080 RGL2O15211 777 aa21.74■■□□□ 1.07
TARDBP-203ENST00000439080 HLFQ16534 295 aa21.74■■□□□ 1.07
TARDBP-203ENST00000439080 BICDL1Q6ZP65 573 aa21.74■■□□□ 1.07
TARDBP-203ENST00000439080 C10orf71Q711Q0 1435 aa21.73■■□□□ 1.07
TARDBP-203ENST00000439080 TM4SF1P30408 202 aa21.73■■□□□ 1.07
TARDBP-203ENST00000439080 CLEC4GQ6UXB4 293 aa21.73■■□□□ 1.07
TARDBP-203ENST00000439080 PHAXQ9H814 394 aaKnown RBP21.73■■□□□ 1.07
TARDBP-203ENST00000439080 PARP3Q9Y6F1 533 aa21.73■■□□□ 1.07
TARDBP-203ENST00000439080 ANKRD31Q8N7Z5 1873 aa21.72■■□□□ 1.07
TARDBP-203ENST00000439080 POLRMTO00411 1230 aaKnown RBP21.72■■□□□ 1.07
TARDBP-203ENST00000439080 KLHL34Q8N239 644 aa21.71■■□□□ 1.07
TARDBP-203ENST00000439080 N4BP2Q86UW6 1770 aaPredicted RBP21.7■■□□□ 1.06
TARDBP-203ENST00000439080 SLC4A2P04920 1241 aa21.69■■□□□ 1.06
TARDBP-203ENST00000439080 GIGYF2Q6Y7W6 1299 aaKnown RBP21.69■■□□□ 1.06
TARDBP-203ENST00000439080 SETDB2Q96T68 719 aa21.69■■□□□ 1.06
TARDBP-203ENST00000439080 FHDC1Q9C0D6 1143 aaPredicted RBP21.69■■□□□ 1.06
TARDBP-203ENST00000439080 NIP7Q9Y221 180 aaKnown RBP eCLIP21.69■■□□□ 1.06
TARDBP-203ENST00000439080 DLEC1Q9Y238 1755 aa21.69■■□□□ 1.06
TARDBP-203ENST00000439080 PLBD2Q8NHP8 589 aa21.68■■□□□ 1.06
TARDBP-203ENST00000439080 COL11A2P13942 1736 aaPredicted RBP21.68■■□□□ 1.06
TARDBP-203ENST00000439080 BRCA1P38398 1863 aaKnown RBP21.67■■□□□ 1.06
TARDBP-203ENST00000439080 GOLGB1Q14789 3259 aaKnown RBP21.67■■□□□ 1.06
TARDBP-203ENST00000439080 ANKRD13DQ6ZTN6 518 aa21.67■■□□□ 1.06
TARDBP-203ENST00000439080 G2E3Q7L622 706 aa21.67■■□□□ 1.06
TARDBP-203ENST00000439080 UBN2Q6ZU65 1347 aa21.66■■□□□ 1.06
TARDBP-203ENST00000439080 TNRC6CQ9HCJ0 1690 aaKnown RBP21.66■■□□□ 1.06
TARDBP-203ENST00000439080 SERPINB2P05120 415 aa21.66■■□□□ 1.06
TARDBP-203ENST00000439080 CT47B1P0C2W7 299 aaPredicted RBP21.66■■□□□ 1.06
TARDBP-203ENST00000439080 GPTP24298 496 aa21.66■■□□□ 1.06
TARDBP-203ENST00000439080 FLIIQ13045 1269 aa21.66■■□□□ 1.06
TARDBP-203ENST00000439080 LAMB2P55268 1798 aa21.65■■□□□ 1.06
TARDBP-203ENST00000439080 DDX58O95786 925 aaKnown RBP21.65■■□□□ 1.06
TARDBP-203ENST00000439080 HSP90AB3PQ58FF7 597 aa21.65■■□□□ 1.06
TARDBP-203ENST00000439080 ZNF428Q96B54 188 aa21.65■■□□□ 1.06
TARDBP-203ENST00000439080 YTHDC1Q96MU7 727 aaKnown RBP21.65■■□□□ 1.06
TARDBP-203ENST00000439080 ADCY9O60503 1353 aa21.65■■□□□ 1.06
TARDBP-203ENST00000439080 RIC3Q7Z5B4 369 aa21.64■■□□□ 1.06
TARDBP-203ENST00000439080 IBTKQ9P2D0 1353 aaPredicted RBP21.64■■□□□ 1.06
TARDBP-203ENST00000439080 PXDNLA1KZ92 1463 aa21.63■■□□□ 1.05
TARDBP-203ENST00000439080 ZNF34Q8IZ26 560 aa21.63■■□□□ 1.05
TARDBP-203ENST00000439080 CNBD1Q8NA66 436 aa21.63■■□□□ 1.05
TARDBP-203ENST00000439080 SSH1Q8WYL5 1049 aa21.63■■□□□ 1.05
TARDBP-203ENST00000439080 BCL2L13Q9BXK5 485 aa21.63■■□□□ 1.05
TARDBP-203ENST00000439080 CD2APQ9Y5K6 639 aa21.63■■□□□ 1.05
TARDBP-203ENST00000439080 FKBP5Q13451 457 aaPredicted RBP21.62■■□□□ 1.05
TARDBP-203ENST00000439080 TCIRG1Q13488 830 aa21.62■■□□□ 1.05
TARDBP-203ENST00000439080 PRR5LQ6MZQ0 368 aa21.62■■□□□ 1.05
TARDBP-203ENST00000439080 NBPF5PQ86XG9 351 aaPredicted RBP21.62■■□□□ 1.05
TARDBP-203ENST00000439080 SYT17Q9BSW7 474 aa21.62■■□□□ 1.05
TARDBP-203ENST00000439080 DDX60Q8IY21 1712 aaKnown RBP21.62■■□□□ 1.05
TARDBP-203ENST00000439080 CACNA1SQ13698 1873 aa21.62■■□□□ 1.05
TARDBP-203ENST00000439080 FAM177BA6PVY3 158 aa21.61■■□□□ 1.05
TARDBP-203ENST00000439080 NPHP1O15259 732 aa21.61■■□□□ 1.05
TARDBP-203ENST00000439080 ALDH1L2Q3SY69 923 aa21.61■■□□□ 1.05
TARDBP-203ENST00000439080 NLGN2Q8NFZ4 835 aa21.61■■□□□ 1.05
TARDBP-203ENST00000439080 MAP3K2Q9Y2U5 619 aa21.61■■□□□ 1.05
TARDBP-203ENST00000439080 PI4KAP2A4QPH2 592 aa21.61■■□□□ 1.05
TARDBP-203ENST00000439080 KSR2Q6VAB6 950 aa21.61■■□□□ 1.05
TARDBP-203ENST00000439080 MRPL50Q8N5N7 158 aaKnown RBP21.61■■□□□ 1.05
TARDBP-203ENST00000439080 PI4KAP1Q8N8J0 262 aa21.61■■□□□ 1.05
TARDBP-203ENST00000439080 SMC4Q9NTJ3 1288 aa21.61■■□□□ 1.05
TARDBP-203ENST00000439080 ST5P78524 1137 aa21.6■■□□□ 1.05
TARDBP-203ENST00000439080 PARP10Q53GL7 1025 aa21.6■■□□□ 1.05
TARDBP-203ENST00000439080 ABCC12Q96J65 1359 aa21.59■■□□□ 1.05
TARDBP-203ENST00000439080 ATP5J2-PTCD1G3V325 749 aa21.59■■□□□ 1.05
TARDBP-203ENST00000439080 SUSD4Q5VX71 490 aa21.59■■□□□ 1.05
TARDBP-203ENST00000439080 NLRP10Q86W26 655 aa21.59■■□□□ 1.05
TARDBP-203ENST00000439080 CCDC24Q8N4L8 307 aa21.59■■□□□ 1.05
TARDBP-203ENST00000439080 MYD88Q99836 296 aa21.59■■□□□ 1.05
TARDBP-203ENST00000439080 ISCA1Q9BUE6 129 aa21.59■■□□□ 1.05
TARDBP-203ENST00000439080 NYXQ9GZU5 481 aa21.59■■□□□ 1.05
TARDBP-203ENST00000439080 NTSR2O95665 410 aa21.58■■□□□ 1.04
TARDBP-203ENST00000439080 METTL22Q9BUU2 404 aaPredicted RBP21.58■■□□□ 1.04
TARDBP-203ENST00000439080 RIC1Q4ADV7 1423 aa21.57■■□□□ 1.04
TARDBP-203ENST00000439080 RARSP54136 660 aaKnown RBP21.57■■□□□ 1.04
TARDBP-203ENST00000439080 TPTE2Q6XPS3 522 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms