RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MTHFSDQ2M296 383 aaKnown RBP15.91■□□□□ 0.14
ACTN1-204ENST00000438964 CEP135Q66GS9 1140 aa15.91■□□□□ 0.14
ACTN1-204ENST00000438964 DDX41Q9UJV9 622 aaKnown RBP15.91■□□□□ 0.14
ACTN1-204ENST00000438964 KIDINS220Q9ULH0 1771 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 SOS1Q07889 1333 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-204ENST00000438964 SMTNL1A8MU46 457 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 SRGAP3O43295 1099 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 ZNF165P49910 485 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 LRRN4CLQ8ND94 238 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 TPCN1Q9ULQ1 816 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 KIF24Q5T7B8 1368 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 UBTFL1P0CB47 393 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-204ENST00000438964 ZNF75DP51815 510 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 NEXMIFQ5QGS0 1516 aa15.9■□□□□ 0.14
ACTN1-204ENST00000438964 PDE4CQ08493 712 aa15.89■□□□□ 0.13
ACTN1-204ENST00000438964 GORABQ5T7V8 394 aa15.89■□□□□ 0.13
ACTN1-204ENST00000438964 FBXO38Q6PIJ6 1188 aa15.89■□□□□ 0.13
ACTN1-204ENST00000438964 CHMP4AQ9BY43 222 aa15.89■□□□□ 0.13
ACTN1-204ENST00000438964 PI4K2BQ8TCG2 481 aa15.89■□□□□ 0.13
ACTN1-204ENST00000438964 FEZ1Q99689 392 aa15.89■□□□□ 0.13
ACTN1-204ENST00000438964 FTOQ9C0B1 505 aaKnown RBP eCLIP15.89■□□□□ 0.13
ACTN1-204ENST00000438964 USP44Q9H0E7 712 aa15.89■□□□□ 0.13
ACTN1-204ENST00000438964 IRX5P78411 483 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-204ENST00000438964 NAP1L2Q9ULW6 460 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-204ENST00000438964 NBPF7P0C2Y1 421 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-204ENST00000438964 LARP1Q6PKG0 1096 aaKnown RBP15.88■□□□□ 0.13
ACTN1-204ENST00000438964 RHPN1Q8TCX5 695 aa15.88■□□□□ 0.13
ACTN1-204ENST00000438964 SPATA32Q96LK8 384 aa15.88■□□□□ 0.13
ACTN1-204ENST00000438964 NEURL4Q96JN8 1562 aa15.88■□□□□ 0.13
ACTN1-204ENST00000438964 SIGLEC1Q9BZZ2 1709 aa15.88■□□□□ 0.13
ACTN1-204ENST00000438964 KRT85P78386 507 aa15.88■□□□□ 0.13
ACTN1-204ENST00000438964 TERF2Q15554 542 aa15.87■□□□□ 0.13
ACTN1-204ENST00000438964 NUDT16Q96DE0 195 aaKnown RBP15.87■□□□□ 0.13
ACTN1-204ENST00000438964 ZFP91Q96JP5 570 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-204ENST00000438964 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-204ENST00000438964 RAB11FIP3O75154 756 aa15.86■□□□□ 0.13
ACTN1-204ENST00000438964 C11orf57Q6ZUT1 292 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-204ENST00000438964 FAM227BQ96M60 508 aa15.86■□□□□ 0.13
ACTN1-204ENST00000438964 PA2G4Q9UQ80 394 aaKnown RBP15.86■□□□□ 0.13
ACTN1-204ENST00000438964 JAK2O60674 1132 aa15.86■□□□□ 0.13
ACTN1-204ENST00000438964 GNAI3P08754 354 aa15.86■□□□□ 0.13
ACTN1-204ENST00000438964 PTPN21Q16825 1174 aa15.86■□□□□ 0.13
ACTN1-204ENST00000438964 CYP46A1Q9Y6A2 500 aa15.86■□□□□ 0.13
ACTN1-204ENST00000438964 KIF20BQ96Q89 1820 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 SKILP12757 684 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 RBM6P78332 1123 aaKnown RBP15.85■□□□□ 0.13
ACTN1-204ENST00000438964 CNTROBQ8N137 903 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 LRRC2Q9BYS8 371 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 STAP2Q9UGK3 403 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 KRT222Q8N1A0 295 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 ANKRD26Q9UPS8 1709 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 CPS1P31327 1500 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 MAP3K19Q56UN5 1328 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 MYO5BQ9ULV0 1848 aa15.85■□□□□ 0.13
ACTN1-204ENST00000438964 PTPN14Q15678 1187 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 ERCC6LQ2NKX8 1250 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 NUTM2GQ5VZR2 741 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 CERS3Q8IU89 383 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 PGBD1Q96JS3 809 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 POLR3GO15318 223 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-204ENST00000438964 CHGBP05060 677 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 TPM3P06753 285 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 CCDC9Q9Y3X0 531 aaKnown RBP15.84■□□□□ 0.13
ACTN1-204ENST00000438964 MLECQ14165 292 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 FMNL2Q96PY5 1086 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 NDUFB9Q9Y6M9 179 aa15.84■□□□□ 0.13
ACTN1-204ENST00000438964 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-204ENST00000438964 PLA2G4DQ86XP0 818 aa15.83■□□□□ 0.12
ACTN1-204ENST00000438964 ZNF446Q9NWS9 450 aa15.83■□□□□ 0.12
ACTN1-204ENST00000438964 WASLO00401 505 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-204ENST00000438964 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-204ENST00000438964 CDC42BPGQ6DT37 1551 aa15.83■□□□□ 0.12
ACTN1-204ENST00000438964 GOLGA6L19H0YKK7 550 aa15.82■□□□□ 0.12
ACTN1-204ENST00000438964 IFIT2P09913 472 aaKnown RBP15.82■□□□□ 0.12
ACTN1-204ENST00000438964 LRRC8AQ8IWT6 810 aa15.82■□□□□ 0.12
ACTN1-204ENST00000438964 LEO1Q8WVC0 666 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-204ENST00000438964 EPC1Q9H2F5 836 aa15.82■□□□□ 0.12
ACTN1-204ENST00000438964 TMX1Q9H3N1 280 aa15.82■□□□□ 0.12
ACTN1-204ENST00000438964 CCDC69A6NI79 296 aa15.82■□□□□ 0.12
ACTN1-204ENST00000438964 EDC3Q96F86 508 aaKnown RBP15.82■□□□□ 0.12
ACTN1-204ENST00000438964 RBM8AQ9Y5S9 174 aaKnown RBP15.82■□□□□ 0.12
ACTN1-204ENST00000438964 MORC2Q9Y6X9 1032 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-204ENST00000438964 CPSF1Q10570 1443 aaKnown RBP15.82■□□□□ 0.12
ACTN1-204ENST00000438964 GUCY1B3Q02153 619 aa15.81■□□□□ 0.12
ACTN1-204ENST00000438964 GABPB1Q06547 395 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-204ENST00000438964 USHBP1Q8N6Y0 703 aa15.81■□□□□ 0.12
ACTN1-204ENST00000438964 SSH2Q76I76 1423 aa15.81■□□□□ 0.12
ACTN1-204ENST00000438964 ZNF397Q8NF99 534 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-204ENST00000438964 CCDC8Q9H0W5 538 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-204ENST00000438964 PAXBP1Q9Y5B6 917 aa15.8■□□□□ 0.12
ACTN1-204ENST00000438964 ATP7BP35670 1465 aa15.8■□□□□ 0.12
ACTN1-204ENST00000438964 RIMS1Q86UR5 1692 aaKnown RBP15.8■□□□□ 0.12
ACTN1-204ENST00000438964 FRMPD1Q5SYB0 1578 aa15.8■□□□□ 0.12
ACTN1-204ENST00000438964 CDK12Q9NYV4 1490 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-204ENST00000438964 CRB1P82279 1406 aa15.8■□□□□ 0.12
ACTN1-204ENST00000438964 BECN2A8MW95 431 aa15.8■□□□□ 0.12
ACTN1-204ENST00000438964 TAF7Q15545 349 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-204ENST00000438964 NEK11Q8NG66 645 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms