RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 NEUROD4Q9HD90 331 aa6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 STRN4Q9NRL3 753 aa6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 MKRN1Q9UHC7 482 aaKnown RBP6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 GPC6Q9Y625 555 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 PALM3A6NDB9 673 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 GNB5O14775 395 aa6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 PROCP04070 461 aa6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 DGKGP49619 791 aa6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 PSMA6P60900 246 aaKnown RBP6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 GRIN2CQ14957 1233 aa6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 ZNF468Q5VIY5 522 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 LRRC69Q6ZNQ3 347 aa6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 CHSY3Q70JA7 882 aa6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 C7orf43Q8WVR3 580 aa6.56□□□□□ -1.36
HMGB1P18-201ENST00000438801 M0R2N6 131 aa6.55□□□□□ -1.36
HMGB1P18-201ENST00000438801 RHPN1Q8TCX5 695 aa6.55□□□□□ -1.36
HMGB1P18-201ENST00000438801 CLUAP1Q96AJ1 413 aa6.55□□□□□ -1.36
HMGB1P18-201ENST00000438801 TSPAN10Q9H1Z9 355 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P18-201ENST00000438801 CHMP3Q9Y3E7 222 aa6.55□□□□□ -1.36
HMGB1P18-201ENST00000438801 TMEM132AQ24JP5 1023 aa6.54□□□□□ -1.36
HMGB1P18-201ENST00000438801 PROSER2Q86WR7 435 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P18-201ENST00000438801 SIX5Q8N196 739 aa6.54□□□□□ -1.36
HMGB1P18-201ENST00000438801 FNBP4Q8N3X1 1017 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P18-201ENST00000438801 GLMNQ92990 594 aa6.54□□□□□ -1.36
HMGB1P18-201ENST00000438801 NOP53Q9NZM5 478 aaKnown RBP6.54□□□□□ -1.36
HMGB1P18-201ENST00000438801 SFI1A8K8P3 1242 aa6.53□□□□□ -1.36
HMGB1P18-201ENST00000438801 C1orf53Q5VUE5 145 aa6.53□□□□□ -1.36
HMGB1P18-201ENST00000438801 POTEAQ6S8J7 498 aa6.53□□□□□ -1.36
HMGB1P18-201ENST00000438801 SYT9Q86SS6 491 aa6.53□□□□□ -1.36
HMGB1P18-201ENST00000438801 ZNF594Q96JF6 807 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P18-201ENST00000438801 TFIP11Q9UBB9 837 aaKnown RBP6.53□□□□□ -1.36
HMGB1P18-201ENST00000438801 HCN4Q9Y3Q4 1203 aa6.53□□□□□ -1.36
HMGB1P18-201ENST00000438801 ELOA3CA0A087WX78 387 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P18-201ENST00000438801 ELOA3DA6NLF2 546 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P18-201ENST00000438801 DKK1O94907 266 aa6.52□□□□□ -1.37
HMGB1P18-201ENST00000438801 HIRAP54198 1017 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P18-201ENST00000438801 ELOA3BQ3SY89 546 aa6.52□□□□□ -1.37
HMGB1P18-201ENST00000438801 TSEN2Q8NCE0 465 aaKnown RBP6.52□□□□□ -1.37
HMGB1P18-201ENST00000438801 ELOA3Q8NG57 546 aa6.52□□□□□ -1.37
HMGB1P18-201ENST00000438801 PHACTR1Q9C0D0 580 aa6.52□□□□□ -1.37
HMGB1P18-201ENST00000438801 RBM19Q9Y4C8 960 aaKnown RBP6.52□□□□□ -1.37
HMGB1P18-201ENST00000438801 PPP1R12BO60237 982 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P18-201ENST00000438801 ADAM23O75077 832 aa6.51□□□□□ -1.37
HMGB1P18-201ENST00000438801 RASA1P20936 1047 aa6.51□□□□□ -1.37
HMGB1P18-201ENST00000438801 ALAS2P22557 587 aa6.51□□□□□ -1.37
HMGB1P18-201ENST00000438801 SFSWAPQ12872 951 aaKnown RBP6.51□□□□□ -1.37
HMGB1P18-201ENST00000438801 MAFBQ9Y5Q3 323 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P18-201ENST00000438801 LMTK3Q96Q04 1460 aa6.5□□□□□ -1.37
HMGB1P18-201ENST00000438801 SIN3BO75182 1162 aa6.5□□□□□ -1.37
HMGB1P18-201ENST00000438801 BAG6P46379 1132 aa6.5□□□□□ -1.37
HMGB1P18-201ENST00000438801 HSH2DQ96JZ2 352 aa6.5□□□□□ -1.37
HMGB1P18-201ENST00000438801 CEP63Q96MT8 703 aa6.5□□□□□ -1.37
HMGB1P18-201ENST00000438801 SLC30A3Q99726 388 aa6.5□□□□□ -1.37
HMGB1P18-201ENST00000438801 MDFIQ99750 246 aa6.5□□□□□ -1.37
HMGB1P18-201ENST00000438801 BRD7Q9NPI1 651 aa6.5□□□□□ -1.37
HMGB1P18-201ENST00000438801 ANKIB1Q9P2G1 1089 aa6.5□□□□□ -1.37
HMGB1P18-201ENST00000438801 ATAD2Q6PL18 1390 aa6.49□□□□□ -1.37
HMGB1P18-201ENST00000438801 C1QTNF9BB2RNN3 333 aa6.49□□□□□ -1.37
HMGB1P18-201ENST00000438801 C21orf2O43822 256 aa6.49□□□□□ -1.37
HMGB1P18-201ENST00000438801 SEC13P55735 322 aa6.49□□□□□ -1.37
HMGB1P18-201ENST00000438801 ALDH16A1Q8IZ83 802 aa6.49□□□□□ -1.37
HMGB1P18-201ENST00000438801 ZNF280CQ8ND82 737 aa6.49□□□□□ -1.37
HMGB1P18-201ENST00000438801 TRIM11Q96F44 468 aa6.49□□□□□ -1.37
HMGB1P18-201ENST00000438801 SUSD3Q96L08 255 aa6.49□□□□□ -1.37
HMGB1P18-201ENST00000438801 ADARB2-AS1A8MUL3 147 aa6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 SPEM2Q0P670 501 aa6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 NEUROD1Q13562 356 aa6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 CD163Q86VB7 1156 aa6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 STAG2Q8N3U4 1231 aa6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 GAS2L2Q8NHY3 880 aa6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 SCG3Q8WXD2 468 aaKnown RBP6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 TNFRSF25Q93038 417 aa6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 CALR3Q96L12 384 aaKnown RBP6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 C2orf49Q9BVC5 232 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 PLVAPQ9BX97 442 aa6.48□□□□□ -1.37
HMGB1P18-201ENST00000438801 A6NJR5 290 aa6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 K7ELQ4 463 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 CHRNA4P43681 627 aa6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 KCNQ4P56696 695 aa6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 TYRO3Q06418 890 aa6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 LARP1Q6PKG0 1096 aaKnown RBP6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 RAB44Q7Z6P3 723 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 CHMP7Q8WUX9 453 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 PPP1R12CQ9BZL4 782 aa6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 KCNH4Q9UQ05 1017 aa6.47□□□□□ -1.37
HMGB1P18-201ENST00000438801 PTK7Q13308 1070 aa6.46□□□□□ -1.38
HMGB1P18-201ENST00000438801 HIF1AQ16665 826 aa6.46□□□□□ -1.38
HMGB1P18-201ENST00000438801 CRTC2Q53ET0 693 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P18-201ENST00000438801 KANK4Q5T7N3 995 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P18-201ENST00000438801 NGLY1Q96IV0 654 aa6.46□□□□□ -1.38
HMGB1P18-201ENST00000438801 HINFPQ9BQA5 517 aa6.46□□□□□ -1.38
HMGB1P18-201ENST00000438801 M0R082 166 aa6.45□□□□□ -1.38
HMGB1P18-201ENST00000438801 FURINP09958 794 aa6.45□□□□□ -1.38
HMGB1P18-201ENST00000438801 SPATA31C1P0DKV0 1188 aa6.45□□□□□ -1.38
HMGB1P18-201ENST00000438801 DPYDQ12882 1025 aa6.45□□□□□ -1.38
HMGB1P18-201ENST00000438801 ZNF417Q8TAU3 575 aa6.45□□□□□ -1.38
HMGB1P18-201ENST00000438801 ZNF587Q96SQ5 575 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P18-201ENST00000438801 SPDYE3A6NKU9 549 aa6.44□□□□□ -1.38
HMGB1P18-201ENST00000438801 FAM196BA6NMK8 535 aa6.44□□□□□ -1.38
HMGB1P18-201ENST00000438801 ALBP02768 609 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms