RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZNF853P0CG23 659 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 FOSBP53539 338 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 NFXL1Q6ZNB6 911 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 ZNF496Q96IT1 587 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 NOL10Q9BSC4 688 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 IQSEC2Q5JU85 1478 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 PHF14O94880 888 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 GAS2L3Q86XJ1 694 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 LMBR1LQ6UX01 489 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 ABCC4O15439 1325 aa13.82□□□□□ -0.2
TRAPPC9-202ENST00000438773 ANKARQ7Z5J8 1434 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 BLOC1S2Q6QNY1 142 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 TNPO1Q92973 898 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 ADAMTS13Q76LX8 1427 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 CLCN1P35523 988 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 MRE11P49959 708 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 MROH1Q8NDA8 1641 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 PREX1Q8TCU6 1659 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 AKAP17AQ02040 695 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 ZNF652Q9Y2D9 606 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 PNPLA6Q8IY17 1366 aa13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 CD2BP2O95400 341 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 IFIT1P09914 478 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-202ENST00000438773 AKAP2Q9Y2D5 859 aa13.8□□□□□ -0.2
TRAPPC9-202ENST00000438773 OTUD7AQ8TE49 926 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-202ENST00000438773 IDH1O75874 414 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-202ENST00000438773 IGHMBP2P38935 993 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-202ENST00000438773 PRPF40BQ6NWY9 871 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-202ENST00000438773 LDHAL6AQ6ZMR3 332 aa13.79□□□□□ -0.2
TRAPPC9-202ENST00000438773 FBXW7Q969H0 707 aa13.79□□□□□ -0.2
TRAPPC9-202ENST00000438773 GIGYF1O75420 1035 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-202ENST00000438773 NBPF7P0C2Y1 421 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-202ENST00000438773 A0A0U1RQG5 324 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-202ENST00000438773 CASTP20810 708 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-202ENST00000438773 STK3Q13188 491 aa13.79□□□□□ -0.2
TRAPPC9-202ENST00000438773 CIZ1Q9ULV3 898 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-202ENST00000438773 KIF24Q5T7B8 1368 aa13.79□□□□□ -0.2
TRAPPC9-202ENST00000438773 ERICH2A1L162 156 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 TULP1O00294 542 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 PHKG2P15735 406 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 EVI5LQ96CN4 794 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 PNMA6EA0A0J9YXQ4 647 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 PDRG1Q9NUG6 133 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 ZNF335Q9H4Z2 1342 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 ESPNB1AK53 854 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 ERBB3P21860 1342 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 RTL1A6NKG5 1358 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 MED14O60244 1454 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 ANKRD18BA2A2Z9 1011 aa13.78□□□□□ -0.2
TRAPPC9-202ENST00000438773 MROH2AA6NES4 1674 aa13.77□□□□□ -0.2
TRAPPC9-202ENST00000438773 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.2
TRAPPC9-202ENST00000438773 TRIM29Q14134 588 aa13.77□□□□□ -0.2
TRAPPC9-202ENST00000438773 DLC1Q96QB1 1528 aa13.77□□□□□ -0.2
TRAPPC9-202ENST00000438773 A1BGP04217 495 aa13.77□□□□□ -0.21
TRAPPC9-202ENST00000438773 PKNOX2Q96KN3 472 aa13.77□□□□□ -0.21
TRAPPC9-202ENST00000438773 ZPR1O75312 459 aa13.77□□□□□ -0.21
TRAPPC9-202ENST00000438773 PDCP20941 246 aa13.77□□□□□ -0.21
TRAPPC9-202ENST00000438773 ADGRL3Q9HAR2 1447 aa13.77□□□□□ -0.21
TRAPPC9-202ENST00000438773 GOLGA6L6A8MZA4 724 aa13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 RRP12Q5JTH9 1297 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 BICD2Q8TD16 824 aa13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 SNRKQ9NRH2 765 aa13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 ATP6V1AP38606 617 aa13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 USP44Q9H0E7 712 aa13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 USP16Q9Y5T5 823 aa13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 NASPP49321 788 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 ZSCAN25Q6NSZ9 544 aa13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 GOLIM4O00461 696 aa13.76□□□□□ -0.21
TRAPPC9-202ENST00000438773 SETD1BQ9UPS6 1966 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-202ENST00000438773 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
TRAPPC9-202ENST00000438773 NEURL4Q96JN8 1562 aa13.75□□□□□ -0.21
TRAPPC9-202ENST00000438773 KRT32Q14532 448 aa13.75□□□□□ -0.21
TRAPPC9-202ENST00000438773 ABCF2Q9UG63 623 aa13.75□□□□□ -0.21
TRAPPC9-202ENST00000438773 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
TRAPPC9-202ENST00000438773 NRDCO43847 1150 aa13.75□□□□□ -0.21
TRAPPC9-202ENST00000438773 ESYT1Q9BSJ8 1104 aa13.75□□□□□ -0.21
TRAPPC9-202ENST00000438773 LRP2BPQ9P2M1 347 aa13.75□□□□□ -0.21
TRAPPC9-202ENST00000438773 METTL22Q9BUU2 404 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-202ENST00000438773 FIBPO43427 364 aa13.74□□□□□ -0.21
TRAPPC9-202ENST00000438773 SSFA2P28290 1259 aa13.74□□□□□ -0.21
TRAPPC9-202ENST00000438773 STK11IPQ8N1F8 1099 aa13.74□□□□□ -0.21
TRAPPC9-202ENST00000438773 CTNNA3Q9UI47 895 aa13.74□□□□□ -0.21
TRAPPC9-202ENST00000438773 DDX46Q7L014 1031 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-202ENST00000438773 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
TRAPPC9-202ENST00000438773 DDIT3P35638 169 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 ZNF592Q92610 1267 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 CCDC34Q96HJ3 373 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 LARP6Q9BRS8 491 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms