RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 ARXQ96QS3 562 aa13.48□□□□□ -0.25
HLA-DMB-259ENST00000438510 COL24A1Q17RW2 1714 aa13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 USP42Q9H9J4 1324 aaKnown RBP13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 RGL2O15211 777 aa13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 ZPR1O75312 459 aa13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 AIMP1Q12904 312 aaKnown RBP13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 FKBP5Q13451 457 aaPredicted RBP13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 PHAXQ9H814 394 aaKnown RBP13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 NARFQ9UHQ1 456 aa13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
HLA-DMB-259ENST00000438510 MAP3K15Q6ZN16 1313 aa13.46□□□□□ -0.25
HLA-DMB-259ENST00000438510 SRCAPQ6ZRS2 3230 aa13.46□□□□□ -0.25
HLA-DMB-259ENST00000438510 ERVV-1B6SEH8 477 aa13.46□□□□□ -0.25
HLA-DMB-259ENST00000438510 CENPBP07199 599 aaPredicted RBP13.46□□□□□ -0.25
HLA-DMB-259ENST00000438510 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
HLA-DMB-259ENST00000438510 G2E3Q7L622 706 aa13.46□□□□□ -0.25
HLA-DMB-259ENST00000438510 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
HLA-DMB-259ENST00000438510 TBC1D2BQ9UPU7 963 aa13.46□□□□□ -0.25
HLA-DMB-259ENST00000438510 PXDNLA1KZ92 1463 aa13.46□□□□□ -0.25
HLA-DMB-259ENST00000438510 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
HLA-DMB-259ENST00000438510 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
HLA-DMB-259ENST00000438510 BCAR3O75815 825 aa13.45□□□□□ -0.26
HLA-DMB-259ENST00000438510 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
HLA-DMB-259ENST00000438510 COL23A1Q86Y22 540 aaPredicted RBP13.45□□□□□ -0.26
HLA-DMB-259ENST00000438510 PLBD2Q8NHP8 589 aa13.45□□□□□ -0.26
HLA-DMB-259ENST00000438510 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 R3HDM1Q15032 1099 aaKnown RBP13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 USPL1Q5W0Q7 1092 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 CLEC4GQ6UXB4 293 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 ARHGAP45Q92619 1136 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 ZBTB3Q9H5J0 574 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 ADCY9O60503 1353 aa13.44□□□□□ -0.26
HLA-DMB-259ENST00000438510 ZKSCAN2Q63HK3 967 aa13.43□□□□□ -0.26
HLA-DMB-259ENST00000438510 FRAT1Q92837 279 aaPredicted RBP13.43□□□□□ -0.26
HLA-DMB-259ENST00000438510 ATP10DQ9P241 1426 aa13.43□□□□□ -0.26
HLA-DMB-259ENST00000438510 SRP68Q9UHB9 627 aaKnown RBP13.43□□□□□ -0.26
HLA-DMB-259ENST00000438510 NOB1Q9ULX3 412 aaKnown RBP13.43□□□□□ -0.26
HLA-DMB-259ENST00000438510 PI4KAP2A4QPH2 592 aa13.42□□□□□ -0.26
HLA-DMB-259ENST00000438510 NEXNQ0ZGT2 675 aa13.42□□□□□ -0.26
HLA-DMB-259ENST00000438510 GIGYF2Q6Y7W6 1299 aaKnown RBP13.42□□□□□ -0.26
HLA-DMB-259ENST00000438510 PI4KAP1Q8N8J0 262 aa13.42□□□□□ -0.26
HLA-DMB-259ENST00000438510 MAP3K2Q9Y2U5 619 aa13.42□□□□□ -0.26
HLA-DMB-259ENST00000438510 LAMB2P55268 1798 aa13.41□□□□□ -0.26
HLA-DMB-259ENST00000438510 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
HLA-DMB-259ENST00000438510 MS4A1P11836 297 aa13.41□□□□□ -0.26
HLA-DMB-259ENST00000438510 GYS1P13807 737 aa13.41□□□□□ -0.26
HLA-DMB-259ENST00000438510 ATF7IPQ6VMQ6 1270 aa13.41□□□□□ -0.26
HLA-DMB-259ENST00000438510 NLGN1Q8N2Q7 840 aa13.41□□□□□ -0.26
HLA-DMB-259ENST00000438510 DNAAF4Q8WXU2 420 aa13.41□□□□□ -0.26
HLA-DMB-259ENST00000438510 METTL22Q9BUU2 404 aaPredicted RBP13.41□□□□□ -0.26
HLA-DMB-259ENST00000438510 NRXN2Q9P2S2 1712 aa13.41□□□□□ -0.26
HLA-DMB-259ENST00000438510 HLFQ16534 295 aa13.4□□□□□ -0.26
HLA-DMB-259ENST00000438510 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
HLA-DMB-259ENST00000438510 RNF216Q9NWF9 866 aaPredicted RBP13.4□□□□□ -0.26
HLA-DMB-259ENST00000438510 MYH3P11055 1940 aa13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 F6X3S4 739 aa13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 TRIM27P14373 513 aa13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 TCIRG1Q13488 830 aa13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 FKBP8Q14318 412 aa13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 MYD88Q99836 296 aa13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 MTFR1LQ9H019 292 aa13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 CARMIL3Q8ND23 1372 aa13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 ABCC4O15439 1325 aa13.39□□□□□ -0.27
HLA-DMB-259ENST00000438510 IBTKQ9P2D0 1353 aaPredicted RBP13.38□□□□□ -0.27
HLA-DMB-259ENST00000438510 RRP1P56182 461 aaKnown RBP13.38□□□□□ -0.27
HLA-DMB-259ENST00000438510 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
HLA-DMB-259ENST00000438510 SLC4A10Q6U841 1118 aa13.38□□□□□ -0.27
HLA-DMB-259ENST00000438510 LINS1Q8NG48 757 aa13.38□□□□□ -0.27
HLA-DMB-259ENST00000438510 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
HLA-DMB-259ENST00000438510 PDGFDQ9GZP0 370 aaPredicted RBP13.38□□□□□ -0.27
HLA-DMB-259ENST00000438510 NIP7Q9Y221 180 aaKnown RBP eCLIP13.38□□□□□ -0.27
HLA-DMB-259ENST00000438510 DDX60Q8IY21 1712 aaKnown RBP13.37□□□□□ -0.27
HLA-DMB-259ENST00000438510 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
HLA-DMB-259ENST00000438510 TBC1D9BQ66K14 1250 aa13.37□□□□□ -0.27
HLA-DMB-259ENST00000438510 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
HLA-DMB-259ENST00000438510 DZIP1LQ8IYY4 767 aaKnown RBP13.37□□□□□ -0.27
HLA-DMB-259ENST00000438510 ZNF34Q8IZ26 560 aa13.37□□□□□ -0.27
HLA-DMB-259ENST00000438510 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
HLA-DMB-259ENST00000438510 SRCIN1Q9C0H9 1055 aa13.37□□□□□ -0.27
HLA-DMB-259ENST00000438510 ALDH1L1O75891 902 aa13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 ZBTB7AO95365 584 aa13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 GPTP24298 496 aa13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 TRIM28Q13263 835 aaKnown RBP13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 NFIXQ14938 502 aa13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 BEND3Q5T5X7 828 aa13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 PPP1R42Q7Z4L9 355 aa13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 CCDC191Q8NCU4 936 aa13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
HLA-DMB-259ENST00000438510 CWC25Q9NXE8 425 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms