RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 PIP4K2AP48426 406 aaPredicted RBP25.59■■□□□ 1.69
MUC1-211ENST00000438413 ERFEQ4G0M1 354 aa25.58■■□□□ 1.69
MUC1-211ENST00000438413 U2AF1L5P0DN76 240 aaPredicted RBP25.57■■□□□ 1.68
MUC1-211ENST00000438413 U2AF1Q01081 240 aaKnown RBP eCLIP25.57■■□□□ 1.68
MUC1-211ENST00000438413 RTF1Q92541 710 aaKnown RBP25.57■■□□□ 1.68
MUC1-211ENST00000438413 CNKSR1Q969H4 720 aa25.57■■□□□ 1.68
MUC1-211ENST00000438413 LTBP3Q9NS15 1303 aa25.57■■□□□ 1.68
MUC1-211ENST00000438413 PRAMEF22A3QJZ6 481 aa25.56■■□□□ 1.68
MUC1-211ENST00000438413 POTECB2RU33 542 aa25.56■■□□□ 1.68
MUC1-211ENST00000438413 SRGNP10124 158 aa25.56■■□□□ 1.68
MUC1-211ENST00000438413 STYK1Q6J9G0 422 aa25.56■■□□□ 1.68
MUC1-211ENST00000438413 MCM10Q7L590 875 aa25.56■■□□□ 1.68
MUC1-211ENST00000438413 TAOK3Q9H2K8 898 aa25.56■■□□□ 1.68
MUC1-211ENST00000438413 SNRPA1P09661 255 aaKnown RBP25.55■■□□□ 1.68
MUC1-211ENST00000438413 PRPF40BQ6NWY9 871 aaKnown RBP25.55■■□□□ 1.68
MUC1-211ENST00000438413 PPP2R1AP30153 589 aa25.54■■□□□ 1.68
MUC1-211ENST00000438413 CLEC4GQ6UXB4 293 aa25.54■■□□□ 1.68
MUC1-211ENST00000438413 MASTLQ96GX5 879 aa25.54■■□□□ 1.68
MUC1-211ENST00000438413 NBPF5PQ86XG9 351 aaPredicted RBP25.53■■□□□ 1.68
MUC1-211ENST00000438413 ZNF652Q9Y2D9 606 aa25.53■■□□□ 1.68
MUC1-211ENST00000438413 SOGA3Q5TF21 947 aa25.52■■□□□ 1.68
MUC1-211ENST00000438413 LAMB4A4D0S4 1761 aa25.51■■□□□ 1.67
MUC1-211ENST00000438413 DCTN1Q14203 1278 aa25.51■■□□□ 1.67
MUC1-211ENST00000438413 HTATSF1O43719 755 aaKnown RBP25.49■■□□□ 1.67
MUC1-211ENST00000438413 COL13A1Q5TAT6 717 aaPredicted RBP25.49■■□□□ 1.67
MUC1-211ENST00000438413 NBPF26B4DH59 902 aa25.48■■□□□ 1.67
MUC1-211ENST00000438413 NBPF10Q6P3W6 841 aaKnown RBP25.48■■□□□ 1.67
MUC1-211ENST00000438413 NBPF15Q8N660 670 aa25.48■■□□□ 1.67
MUC1-211ENST00000438413 DLG5Q8TDM6 1919 aa25.47■■□□□ 1.67
MUC1-211ENST00000438413 DDNO94850 711 aaPredicted RBP25.47■■□□□ 1.67
MUC1-211ENST00000438413 NIP7Q9Y221 180 aaKnown RBP eCLIP25.47■■□□□ 1.67
MUC1-211ENST00000438413 PCNTO95613 3336 aa25.47■■□□□ 1.67
MUC1-211ENST00000438413 RGL2O15211 777 aa25.46■■□□□ 1.67
MUC1-211ENST00000438413 NPR1P16066 1061 aa25.46■■□□□ 1.67
MUC1-211ENST00000438413 TAF7Q15545 349 aaPredicted RBP25.46■■□□□ 1.67
MUC1-211ENST00000438413 CCDC93Q567U6 631 aa25.46■■□□□ 1.67
MUC1-211ENST00000438413 TPTE2Q6XPS3 522 aa25.46■■□□□ 1.67
MUC1-211ENST00000438413 C7orf43Q8WVR3 580 aa25.45■■□□□ 1.66
MUC1-211ENST00000438413 KDM3BQ7LBC6 1761 aa25.45■■□□□ 1.66
MUC1-211ENST00000438413 KLRG2A4D1S0 409 aaPredicted RBP25.44■■□□□ 1.66
MUC1-211ENST00000438413 CHADLQ6NUI6 762 aa25.44■■□□□ 1.66
MUC1-211ENST00000438413 SCN4AP35499 1836 aa25.44■■□□□ 1.66
MUC1-211ENST00000438413 FAM177BA6PVY3 158 aa25.43■■□□□ 1.66
MUC1-211ENST00000438413 POTEIP0CG38 1075 aa25.43■■□□□ 1.66
MUC1-211ENST00000438413 POTEJP0CG39 1038 aa25.43■■□□□ 1.66
MUC1-211ENST00000438413 MIS18AQ9NYP9 233 aa25.43■■□□□ 1.66
MUC1-211ENST00000438413 HSPA1AP0DMV8 641 aaKnown RBP25.41■■□□□ 1.66
MUC1-211ENST00000438413 HSPA1BP0DMV9 641 aaKnown RBP25.41■■□□□ 1.66
MUC1-211ENST00000438413 FKBP4Q02790 459 aaKnown RBP eCLIP25.41■■□□□ 1.66
MUC1-211ENST00000438413 HLFQ16534 295 aa25.41■■□□□ 1.66
MUC1-211ENST00000438413 NUP98P52948 1817 aa25.4■■□□□ 1.66
MUC1-211ENST00000438413 IQCA1LA6NCM1 817 aa25.4■■□□□ 1.66
MUC1-211ENST00000438413 NEFMP07197 916 aa25.4■■□□□ 1.66
MUC1-211ENST00000438413 GTF2E1P29083 439 aaPredicted RBP25.38■■□□□ 1.65
MUC1-211ENST00000438413 OLFM4Q6UX06 510 aa25.38■■□□□ 1.65
MUC1-211ENST00000438413 TNS4Q8IZW8 715 aa25.38■■□□□ 1.65
MUC1-211ENST00000438413 L3MBTL3Q96JM7 780 aaPredicted RBP25.38■■□□□ 1.65
MUC1-211ENST00000438413 ZNF277Q9NRM2 450 aaPredicted RBP25.38■■□□□ 1.65
MUC1-211ENST00000438413 CREBZFQ9NS37 354 aa25.38■■□□□ 1.65
MUC1-211ENST00000438413 ALDH1B1P30837 517 aa25.37■■□□□ 1.65
MUC1-211ENST00000438413 RTKN2Q8IZC4 609 aa25.37■■□□□ 1.65
MUC1-211ENST00000438413 PNISRQ8TF01 805 aaKnown RBP25.37■■□□□ 1.65
MUC1-211ENST00000438413 LDHDQ86WU2 507 aa25.36■■□□□ 1.65
MUC1-211ENST00000438413 NGEFQ8N5V2 710 aa25.36■■□□□ 1.65
MUC1-211ENST00000438413 TAF1DQ9H5J8 278 aaPredicted RBP25.36■■□□□ 1.65
MUC1-211ENST00000438413 ZNF541Q9H0D2 1346 aa25.36■■□□□ 1.65
MUC1-211ENST00000438413 ABCC12Q96J65 1359 aa25.34■■□□□ 1.65
MUC1-211ENST00000438413 ERVV-1B6SEH8 477 aa25.34■■□□□ 1.65
MUC1-211ENST00000438413 NYXQ9GZU5 481 aa25.34■■□□□ 1.65
MUC1-211ENST00000438413 MKRN1Q9UHC7 482 aaKnown RBP25.34■■□□□ 1.65
MUC1-211ENST00000438413 IARSP41252 1262 aaKnown RBP25.33■■□□□ 1.65
MUC1-211ENST00000438413 NUTM1Q86Y26 1132 aa25.33■■□□□ 1.65
MUC1-211ENST00000438413 RRP7AQ9Y3A4 280 aaKnown RBP25.33■■□□□ 1.65
MUC1-211ENST00000438413 MAP3K15Q6ZN16 1313 aa25.33■■□□□ 1.64
MUC1-211ENST00000438413 PASKQ96RG2 1323 aa25.33■■□□□ 1.64
MUC1-211ENST00000438413 CAPN15O75808 1086 aa25.32■■□□□ 1.64
MUC1-211ENST00000438413 EIF4A1P60842 406 aaKnown RBP25.32■■□□□ 1.64
MUC1-211ENST00000438413 KIF6Q6ZMV9 814 aa25.32■■□□□ 1.64
MUC1-211ENST00000438413 SYNE4Q8N205 404 aa25.32■■□□□ 1.64
MUC1-211ENST00000438413 PLEKHF1Q96S99 279 aa25.32■■□□□ 1.64
MUC1-211ENST00000438413 ADAMTSL1Q8N6G6 1762 aa25.31■■□□□ 1.64
MUC1-211ENST00000438413 SNED1Q8TER0 1413 aa25.31■■□□□ 1.64
MUC1-211ENST00000438413 NFE2L2Q16236 605 aa25.31■■□□□ 1.64
MUC1-211ENST00000438413 CRY2Q49AN0 593 aa25.31■■□□□ 1.64
MUC1-211ENST00000438413 EAPPQ56P03 285 aaPredicted RBP25.31■■□□□ 1.64
MUC1-211ENST00000438413 TTLL7Q6ZT98 887 aa25.31■■□□□ 1.64
MUC1-211ENST00000438413 HACL1Q9UJ83 578 aa25.31■■□□□ 1.64
MUC1-211ENST00000438413 MYL6BP14649 208 aa25.3■■□□□ 1.64
MUC1-211ENST00000438413 THUMPD2Q9BTF0 503 aaKnown RBP25.3■■□□□ 1.64
MUC1-211ENST00000438413 FZD9O00144 591 aa25.29■■□□□ 1.64
MUC1-211ENST00000438413 CNTNAP1P78357 1384 aa25.29■■□□□ 1.64
MUC1-211ENST00000438413 IBTKQ9P2D0 1353 aaPredicted RBP25.29■■□□□ 1.64
MUC1-211ENST00000438413 RIC1Q4ADV7 1423 aa25.29■■□□□ 1.64
MUC1-211ENST00000438413 GPTP24298 496 aa25.28■■□□□ 1.64
MUC1-211ENST00000438413 EPHX2P34913 555 aa25.28■■□□□ 1.64
MUC1-211ENST00000438413 RPGRQ92834 1020 aaKnown RBP25.28■■□□□ 1.64
MUC1-211ENST00000438413 PSMD1Q99460 953 aa25.28■■□□□ 1.64
MUC1-211ENST00000438413 ZBTB3Q9H5J0 574 aa25.28■■□□□ 1.64
MUC1-211ENST00000438413 CLEC11AQ9Y240 323 aa25.28■■□□□ 1.64
MUC1-211ENST00000438413 RNF123Q5XPI4 1314 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms