RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 AMOTQ4VCS5 1084 aa23.23■■□□□ 1.31
FAM239A-202ENST00000438107 FAM184AQ8NB25 1140 aa23.23■■□□□ 1.31
FAM239A-202ENST00000438107 UVSSAQ2YD98 709 aa23.23■■□□□ 1.31
FAM239A-202ENST00000438107 CWC27Q6UX04 472 aaKnown RBP23.23■■□□□ 1.31
FAM239A-202ENST00000438107 RASEFQ8IZ41 740 aa23.23■■□□□ 1.31
FAM239A-202ENST00000438107 GPATCH3Q96I76 525 aa23.23■■□□□ 1.31
FAM239A-202ENST00000438107 KCNQ3O43525 872 aa23.22■■□□□ 1.31
FAM239A-202ENST00000438107 GADD45BO75293 160 aaPredicted RBP23.22■■□□□ 1.31
FAM239A-202ENST00000438107 LETM1O95202 739 aaPredicted RBP23.22■■□□□ 1.31
FAM239A-202ENST00000438107 OS9Q13438 667 aaPredicted RBP23.22■■□□□ 1.31
FAM239A-202ENST00000438107 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
FAM239A-202ENST00000438107 RUFY3Q7L099 469 aa23.22■■□□□ 1.31
FAM239A-202ENST00000438107 KCNB2Q92953 911 aa23.22■■□□□ 1.31
FAM239A-202ENST00000438107 DIAPH3Q9NSV4 1193 aa23.22■■□□□ 1.31
FAM239A-202ENST00000438107 TM6SF1Q9BZW5 370 aa23.21■■□□□ 1.31
FAM239A-202ENST00000438107 ECHDC1Q9NTX5 307 aa23.21■■□□□ 1.31
FAM239A-202ENST00000438107 ATP6V1DQ9Y5K8 247 aa23.21■■□□□ 1.31
FAM239A-202ENST00000438107 SIPA1L3O60292 1781 aaPredicted RBP23.21■■□□□ 1.31
FAM239A-202ENST00000438107 CSPP1Q1MSJ5 1256 aa23.21■■□□□ 1.31
FAM239A-202ENST00000438107 HEG1Q9ULI3 1381 aa23.21■■□□□ 1.31
FAM239A-202ENST00000438107 STX6O43752 255 aa23.2■■□□□ 1.3
FAM239A-202ENST00000438107 RBM33Q96EV2 1170 aaKnown RBP23.2■■□□□ 1.3
FAM239A-202ENST00000438107 CAMTA1Q9Y6Y1 1673 aa23.2■■□□□ 1.3
FAM239A-202ENST00000438107 LMTK3Q96Q04 1460 aa23.2■■□□□ 1.3
FAM239A-202ENST00000438107 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
FAM239A-202ENST00000438107 CCDC183Q5T5S1 534 aa23.2■■□□□ 1.3
FAM239A-202ENST00000438107 ZSCAN31Q96LW9 406 aaPredicted RBP23.2■■□□□ 1.3
FAM239A-202ENST00000438107 GDPD2Q9HCC8 539 aa23.2■■□□□ 1.3
FAM239A-202ENST00000438107 SMC3Q9UQE7 1217 aa23.2■■□□□ 1.3
FAM239A-202ENST00000438107 VPS53Q5VIR6 699 aa23.19■■□□□ 1.3
FAM239A-202ENST00000438107 KSR2Q6VAB6 950 aa23.19■■□□□ 1.3
FAM239A-202ENST00000438107 RNF214Q8ND24 703 aa23.19■■□□□ 1.3
FAM239A-202ENST00000438107 SYT1P21579 422 aa23.18■■□□□ 1.3
FAM239A-202ENST00000438107 C9orf78Q9NZ63 289 aaPredicted RBP23.18■■□□□ 1.3
FAM239A-202ENST00000438107 SPG7Q9UQ90 795 aa23.18■■□□□ 1.3
FAM239A-202ENST00000438107 F13A1P00488 732 aa23.18■■□□□ 1.3
FAM239A-202ENST00000438107 UBE2HP62256 183 aa23.18■■□□□ 1.3
FAM239A-202ENST00000438107 EVI5LQ96CN4 794 aa23.18■■□□□ 1.3
FAM239A-202ENST00000438107 SH2B1Q9NRF2 756 aaPredicted RBP23.18■■□□□ 1.3
FAM239A-202ENST00000438107 HYPKQ9NX55 129 aa23.18■■□□□ 1.3
FAM239A-202ENST00000438107 MAP3K2Q9Y2U5 619 aa23.18■■□□□ 1.3
FAM239A-202ENST00000438107 CASTP20810 708 aaKnown RBP23.17■■□□□ 1.3
FAM239A-202ENST00000438107 SLIT3O75094 1523 aa23.17■■□□□ 1.3
FAM239A-202ENST00000438107 ADAMTS7Q9UKP4 1686 aa23.17■■□□□ 1.3
FAM239A-202ENST00000438107 GIGYF1O75420 1035 aaPredicted RBP23.17■■□□□ 1.3
FAM239A-202ENST00000438107 ANXA1P04083 346 aa23.17■■□□□ 1.3
FAM239A-202ENST00000438107 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
FAM239A-202ENST00000438107 ZSWIM6Q9HCJ5 1215 aa23.17■■□□□ 1.3
FAM239A-202ENST00000438107 HIP1O00291 1037 aa23.16■■□□□ 1.3
FAM239A-202ENST00000438107 IFIT2P09913 472 aaKnown RBP23.16■■□□□ 1.3
FAM239A-202ENST00000438107 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
FAM239A-202ENST00000438107 CNPY2Q9Y2B0 182 aa23.16■■□□□ 1.3
FAM239A-202ENST00000438107 UTYO14607 1347 aa23.16■■□□□ 1.3
FAM239A-202ENST00000438107 PSME1Q06323 249 aa23.16■■□□□ 1.3
FAM239A-202ENST00000438107 FOXD4L6Q3SYB3 417 aaPredicted RBP23.16■■□□□ 1.3
FAM239A-202ENST00000438107 FOXD4L3Q6VB84 417 aaPredicted RBP23.16■■□□□ 1.3
FAM239A-202ENST00000438107 PXDNQ92626 1479 aa23.15■■□□□ 1.3
FAM239A-202ENST00000438107 PDRG1Q9NUG6 133 aa23.15■■□□□ 1.3
FAM239A-202ENST00000438107 PDIA4P13667 645 aaKnown RBP23.14■■□□□ 1.3
FAM239A-202ENST00000438107 PTH1RQ03431 593 aa23.14■■□□□ 1.3
FAM239A-202ENST00000438107 GLIPR1L2Q4G1C9 344 aa23.14■■□□□ 1.3
FAM239A-202ENST00000438107 ESCO1Q5FWF5 840 aa23.14■■□□□ 1.3
FAM239A-202ENST00000438107 CYP46A1Q9Y6A2 500 aa23.14■■□□□ 1.3
FAM239A-202ENST00000438107 NECTIN1Q15223 517 aa23.14■■□□□ 1.29
FAM239A-202ENST00000438107 LRRC59Q96AG4 307 aaKnown RBP23.14■■□□□ 1.29
FAM239A-202ENST00000438107 XPCQ01831 940 aaPredicted RBP23.13■■□□□ 1.29
FAM239A-202ENST00000438107 LINS1Q8NG48 757 aa23.13■■□□□ 1.29
FAM239A-202ENST00000438107 JAKMIP1Q96N16 626 aaKnown RBP23.13■■□□□ 1.29
FAM239A-202ENST00000438107 SNRKQ9NRH2 765 aa23.13■■□□□ 1.29
FAM239A-202ENST00000438107 CCDC171Q6TFL3 1326 aa23.13■■□□□ 1.29
FAM239A-202ENST00000438107 ARHGEF25Q86VW2 580 aa23.12■■□□□ 1.29
FAM239A-202ENST00000438107 LARGE1O95461 756 aa23.11■■□□□ 1.29
FAM239A-202ENST00000438107 DDX58O95786 925 aaKnown RBP23.11■■□□□ 1.29
FAM239A-202ENST00000438107 ZKSCAN1P17029 563 aaPredicted RBP23.11■■□□□ 1.29
FAM239A-202ENST00000438107 GJB2P29033 226 aa23.11■■□□□ 1.29
FAM239A-202ENST00000438107 PRPF40BQ6NWY9 871 aaKnown RBP23.11■■□□□ 1.29
FAM239A-202ENST00000438107 GRM8O00222 908 aa23.11■■□□□ 1.29
FAM239A-202ENST00000438107 PTMAP06454 111 aaKnown RBP23.11■■□□□ 1.29
FAM239A-202ENST00000438107 AACSQ86V21 672 aa23.11■■□□□ 1.29
FAM239A-202ENST00000438107 R3HCC1Q9Y3T6 440 aaKnown RBP23.11■■□□□ 1.29
FAM239A-202ENST00000438107 PROSER3Q2NL68 480 aa23.1■■□□□ 1.29
FAM239A-202ENST00000438107 ADCK5Q3MIX3 580 aa23.1■■□□□ 1.29
FAM239A-202ENST00000438107 CCDC83Q8IWF9 413 aa23.1■■□□□ 1.29
FAM239A-202ENST00000438107 PA2G4Q9UQ80 394 aaKnown RBP23.1■■□□□ 1.29
FAM239A-202ENST00000438107 MTMR6Q9Y217 621 aa23.1■■□□□ 1.29
FAM239A-202ENST00000438107 CPA1P15085 419 aa23.1■■□□□ 1.29
FAM239A-202ENST00000438107 ZBTB7CA1YPR0 619 aa23.09■■□□□ 1.29
FAM239A-202ENST00000438107 CWF19L2Q2TBE0 894 aaKnown RBP23.09■■□□□ 1.29
FAM239A-202ENST00000438107 MAP4K1Q92918 833 aa23.09■■□□□ 1.29
FAM239A-202ENST00000438107 LARP6Q9BRS8 491 aaKnown RBP23.09■■□□□ 1.29
FAM239A-202ENST00000438107 DDX21Q9NR30 783 aaKnown RBP eCLIP23.09■■□□□ 1.29
FAM239A-202ENST00000438107 GCP02774 474 aa23.08■■□□□ 1.29
FAM239A-202ENST00000438107 G3BP1Q13283 466 aaKnown RBP eCLIP23.08■■□□□ 1.29
FAM239A-202ENST00000438107 NPHP4O75161 1426 aaPredicted RBP23.08■■□□□ 1.29
FAM239A-202ENST00000438107 PSMA5P28066 241 aa23.08■■□□□ 1.29
FAM239A-202ENST00000438107 SUCLG2Q96I99 432 aa23.08■■□□□ 1.29
FAM239A-202ENST00000438107 PDCL3Q9H2J4 239 aa23.08■■□□□ 1.29
FAM239A-202ENST00000438107 RBM8AQ9Y5S9 174 aaKnown RBP23.08■■□□□ 1.29
FAM239A-202ENST00000438107 MRC1P22897 1456 aa23.08■■□□□ 1.28
FAM239A-202ENST00000438107 SASH1O94885 1247 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms