RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 KCNQ3O43525 872 aa20■□□□□ 0.79
HDAC8-213ENST00000436675 CAMTA2O94983 1202 aa20■□□□□ 0.79
HDAC8-213ENST00000436675 SRGNP10124 158 aa20■□□□□ 0.79
HDAC8-213ENST00000436675 STYK1Q6J9G0 422 aa20■□□□□ 0.79
HDAC8-213ENST00000436675 ARFGEF2Q9Y6D5 1785 aa20■□□□□ 0.79
HDAC8-213ENST00000436675 MASTLQ96GX5 879 aa19.99■□□□□ 0.79
HDAC8-213ENST00000436675 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
HDAC8-213ENST00000436675 DZIP3Q86Y13 1208 aaKnown RBP19.98■□□□□ 0.79
HDAC8-213ENST00000436675 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
HDAC8-213ENST00000436675 CNTNAP1P78357 1384 aa19.97■□□□□ 0.79
HDAC8-213ENST00000436675 EAPPQ56P03 285 aaPredicted RBP19.97■□□□□ 0.79
HDAC8-213ENST00000436675 GAS2L2Q8NHY3 880 aa19.97■□□□□ 0.79
HDAC8-213ENST00000436675 TAF1DQ9H5J8 278 aaPredicted RBP19.97■□□□□ 0.79
HDAC8-213ENST00000436675 KIF7Q2M1P5 1343 aa19.97■□□□□ 0.79
HDAC8-213ENST00000436675 SCN4AP35499 1836 aa19.97■□□□□ 0.79
HDAC8-213ENST00000436675 IQCA1LA6NCM1 817 aa19.96■□□□□ 0.79
HDAC8-213ENST00000436675 SOGA3Q5TF21 947 aa19.96■□□□□ 0.79
HDAC8-213ENST00000436675 OLFM4Q6UX06 510 aa19.96■□□□□ 0.79
HDAC8-213ENST00000436675 LDHDQ86WU2 507 aa19.96■□□□□ 0.79
HDAC8-213ENST00000436675 NBPF5PQ86XG9 351 aaPredicted RBP19.96■□□□□ 0.79
HDAC8-213ENST00000436675 CLEC11AQ9Y240 323 aa19.96■□□□□ 0.79
HDAC8-213ENST00000436675 VEGFBP49765 207 aa19.95■□□□□ 0.78
HDAC8-213ENST00000436675 ZNF277Q9NRM2 450 aaPredicted RBP19.95■□□□□ 0.78
HDAC8-213ENST00000436675 PASKQ96RG2 1323 aa19.95■□□□□ 0.78
HDAC8-213ENST00000436675 ZNF541Q9H0D2 1346 aa19.95■□□□□ 0.78
HDAC8-213ENST00000436675 PRAMEF22A3QJZ6 481 aa19.94■□□□□ 0.78
HDAC8-213ENST00000436675 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
HDAC8-213ENST00000436675 BTBD11A6QL63 1104 aa19.94■□□□□ 0.78
HDAC8-213ENST00000436675 CCDC93Q567U6 631 aa19.94■□□□□ 0.78
HDAC8-213ENST00000436675 AIDAQ96BJ3 306 aa19.94■□□□□ 0.78
HDAC8-213ENST00000436675 USP16Q9Y5T5 823 aa19.94■□□□□ 0.78
HDAC8-213ENST00000436675 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
HDAC8-213ENST00000436675 TMEM88BA6NKF7 163 aa19.93■□□□□ 0.78
HDAC8-213ENST00000436675 PER1O15534 1290 aaPredicted RBP19.93■□□□□ 0.78
HDAC8-213ENST00000436675 C7orf43Q8WVR3 580 aa19.93■□□□□ 0.78
HDAC8-213ENST00000436675 L3MBTL3Q96JM7 780 aaPredicted RBP19.93■□□□□ 0.78
HDAC8-213ENST00000436675 ITGBL1O95965 494 aaPredicted RBP19.91■□□□□ 0.78
HDAC8-213ENST00000436675 NPR1P16066 1061 aa19.91■□□□□ 0.78
HDAC8-213ENST00000436675 CTCFP49711 727 aaPredicted RBP19.91■□□□□ 0.78
HDAC8-213ENST00000436675 FKBP4Q02790 459 aaKnown RBP eCLIP19.91■□□□□ 0.78
HDAC8-213ENST00000436675 PHACTR3Q96KR7 559 aa19.91■□□□□ 0.78
HDAC8-213ENST00000436675 PRDM10Q9NQV6 1147 aa19.91■□□□□ 0.78
HDAC8-213ENST00000436675 LBX1P52954 281 aa19.9■□□□□ 0.78
HDAC8-213ENST00000436675 HACL1Q9UJ83 578 aa19.9■□□□□ 0.78
HDAC8-213ENST00000436675 EPHX2P34913 555 aa19.89■□□□□ 0.77
HDAC8-213ENST00000436675 RNF123Q5XPI4 1314 aa19.89■□□□□ 0.77
HDAC8-213ENST00000436675 CEMIPQ8WUJ3 1361 aa19.89■□□□□ 0.77
HDAC8-213ENST00000436675 NIP7Q9Y221 180 aaKnown RBP eCLIP19.89■□□□□ 0.77
HDAC8-213ENST00000436675 PRKAR2BP31323 418 aa19.88■□□□□ 0.77
HDAC8-213ENST00000436675 MAP1SQ66K74 1059 aaPredicted RBP19.88■□□□□ 0.77
HDAC8-213ENST00000436675 ZNF652Q9Y2D9 606 aa19.88■□□□□ 0.77
HDAC8-213ENST00000436675 CLEC4GQ6UXB4 293 aa19.87■□□□□ 0.77
HDAC8-213ENST00000436675 TPTE2Q6XPS3 522 aa19.87■□□□□ 0.77
HDAC8-213ENST00000436675 SYNE4Q8N205 404 aa19.87■□□□□ 0.77
HDAC8-213ENST00000436675 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
HDAC8-213ENST00000436675 ADAMTSL1Q8N6G6 1762 aa19.86■□□□□ 0.77
HDAC8-213ENST00000436675 MCM10Q7L590 875 aa19.86■□□□□ 0.77
HDAC8-213ENST00000436675 CNTROBQ8N137 903 aa19.86■□□□□ 0.77
HDAC8-213ENST00000436675 WBP1LQ9NX94 342 aa19.86■□□□□ 0.77
HDAC8-213ENST00000436675 NBPF26B4DH59 902 aa19.85■□□□□ 0.77
HDAC8-213ENST00000436675 SNRPA1P09661 255 aaKnown RBP19.85■□□□□ 0.77
HDAC8-213ENST00000436675 IARSP41252 1262 aaKnown RBP19.85■□□□□ 0.77
HDAC8-213ENST00000436675 DEFB115Q30KQ5 88 aa19.85■□□□□ 0.77
HDAC8-213ENST00000436675 NBPF10Q6P3W6 841 aaKnown RBP19.85■□□□□ 0.77
HDAC8-213ENST00000436675 RTKN2Q8IZC4 609 aa19.85■□□□□ 0.77
HDAC8-213ENST00000436675 NBPF15Q8N660 670 aa19.85■□□□□ 0.77
HDAC8-213ENST00000436675 KLRG2A4D1S0 409 aaPredicted RBP19.84■□□□□ 0.77
HDAC8-213ENST00000436675 GTF2E1P29083 439 aaPredicted RBP19.84■□□□□ 0.77
HDAC8-213ENST00000436675 DCTN1Q14203 1278 aa19.84■□□□□ 0.77
HDAC8-213ENST00000436675 HLFQ16534 295 aa19.84■□□□□ 0.77
HDAC8-213ENST00000436675 RSPH6AQ9H0K4 717 aa19.84■□□□□ 0.77
HDAC8-213ENST00000436675 ABT1Q9ULW3 272 aaKnown RBP19.84■□□□□ 0.77
HDAC8-213ENST00000436675 GJA3Q9Y6H8 435 aa19.84■□□□□ 0.77
HDAC8-213ENST00000436675 PNMA8AQ86V59 439 aaPredicted RBP19.83■□□□□ 0.77
HDAC8-213ENST00000436675 NGEFQ8N5V2 710 aa19.83■□□□□ 0.77
HDAC8-213ENST00000436675 FZD9O00144 591 aa19.82■□□□□ 0.76
HDAC8-213ENST00000436675 HSPA8P11142 646 aaKnown RBP19.82■□□□□ 0.76
HDAC8-213ENST00000436675 ALDH1B1P30837 517 aa19.82■□□□□ 0.76
HDAC8-213ENST00000436675 FMR1Q06787 632 aaKnown RBP eCLIP19.82■□□□□ 0.76
HDAC8-213ENST00000436675 RTF1Q92541 710 aaKnown RBP19.82■□□□□ 0.76
HDAC8-213ENST00000436675 WDR33Q9C0J8 1336 aaKnown RBP19.81■□□□□ 0.76
HDAC8-213ENST00000436675 RASSF10A6NK89 507 aa19.81■□□□□ 0.76
HDAC8-213ENST00000436675 GPC2Q8N158 579 aa19.81■□□□□ 0.76
HDAC8-213ENST00000436675 JDP2Q8WYK2 163 aa19.81■□□□□ 0.76
HDAC8-213ENST00000436675 GRM1Q13255 1194 aa19.8■□□□□ 0.76
HDAC8-213ENST00000436675 PAXIP1Q6ZW49 1069 aaPredicted RBP19.8■□□□□ 0.76
HDAC8-213ENST00000436675 NUTM1Q86Y26 1132 aa19.8■□□□□ 0.76
HDAC8-213ENST00000436675 CFAP53Q96M91 514 aa19.8■□□□□ 0.76
HDAC8-213ENST00000436675 MIS18AQ9NYP9 233 aa19.8■□□□□ 0.76
HDAC8-213ENST00000436675 COL4A5P29400 1685 aa19.79■□□□□ 0.76
HDAC8-213ENST00000436675 U2AF1L5P0DN76 240 aaPredicted RBP19.79■□□□□ 0.76
HDAC8-213ENST00000436675 U2AF1Q01081 240 aaKnown RBP eCLIP19.79■□□□□ 0.76
HDAC8-213ENST00000436675 ABHD8Q96I13 439 aa19.79■□□□□ 0.76
HDAC8-213ENST00000436675 ABCC12Q96J65 1359 aa19.79■□□□□ 0.76
HDAC8-213ENST00000436675 NUP98P52948 1817 aa19.79■□□□□ 0.76
HDAC8-213ENST00000436675 TCERG1O14776 1098 aaKnown RBP19.78■□□□□ 0.76
HDAC8-213ENST00000436675 EIF6P56537 245 aaKnown RBP19.78■□□□□ 0.76
HDAC8-213ENST00000436675 SLC51AQ86UW1 340 aa19.78■□□□□ 0.76
HDAC8-213ENST00000436675 DDX21Q9NR30 783 aaKnown RBP eCLIP19.78■□□□□ 0.76
HDAC8-213ENST00000436675 LTBP1Q14766 1721 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms