RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 VEGFBP49765 207 aa15.61■□□□□ 0.09
LINC00271-202ENST00000436554 CC2D1BQ5T0F9 858 aaKnown RBP15.61■□□□□ 0.09
LINC00271-202ENST00000436554 CLSPNQ9HAW4 1339 aa15.61■□□□□ 0.09
LINC00271-202ENST00000436554 TIAM2Q8IVF5 1701 aa15.6■□□□□ 0.09
LINC00271-202ENST00000436554 TMEM88BA6NKF7 163 aa15.6■□□□□ 0.09
LINC00271-202ENST00000436554 U2SURPO15042 1029 aaKnown RBP15.6■□□□□ 0.09
LINC00271-202ENST00000436554 ITGBL1O95965 494 aaPredicted RBP15.6■□□□□ 0.09
LINC00271-202ENST00000436554 DZIP3Q86Y13 1208 aaKnown RBP15.6■□□□□ 0.09
LINC00271-202ENST00000436554 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
LINC00271-202ENST00000436554 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
LINC00271-202ENST00000436554 USP16Q9Y5T5 823 aa15.6■□□□□ 0.09
LINC00271-202ENST00000436554 PER1O15534 1290 aaPredicted RBP15.59■□□□□ 0.09
LINC00271-202ENST00000436554 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
LINC00271-202ENST00000436554 CTCFP49711 727 aaPredicted RBP15.59■□□□□ 0.09
LINC00271-202ENST00000436554 EAPPQ56P03 285 aaPredicted RBP15.59■□□□□ 0.09
LINC00271-202ENST00000436554 GAS2L2Q8NHY3 880 aa15.59■□□□□ 0.09
LINC00271-202ENST00000436554 AIDAQ96BJ3 306 aa15.59■□□□□ 0.09
LINC00271-202ENST00000436554 ZNF277Q9NRM2 450 aaPredicted RBP15.59■□□□□ 0.09
LINC00271-202ENST00000436554 ANKRD31Q8N7Z5 1873 aa15.59■□□□□ 0.09
LINC00271-202ENST00000436554 BTBD11A6QL63 1104 aa15.58■□□□□ 0.08
LINC00271-202ENST00000436554 CCDC93Q567U6 631 aa15.58■□□□□ 0.08
LINC00271-202ENST00000436554 NBPF5PQ86XG9 351 aaPredicted RBP15.58■□□□□ 0.08
LINC00271-202ENST00000436554 WBP1LQ9NX94 342 aa15.58■□□□□ 0.08
LINC00271-202ENST00000436554 FER1L6Q2WGJ9 1857 aa15.58■□□□□ 0.08
LINC00271-202ENST00000436554 SLX4Q8IY92 1834 aa15.57■□□□□ 0.08
LINC00271-202ENST00000436554 NPR1P16066 1061 aa15.57■□□□□ 0.08
LINC00271-202ENST00000436554 LBX1P52954 281 aa15.57■□□□□ 0.08
LINC00271-202ENST00000436554 FKBP4Q02790 459 aaKnown RBP eCLIP15.57■□□□□ 0.08
LINC00271-202ENST00000436554 CNGB1Q14028 1251 aaPredicted RBP15.57■□□□□ 0.08
LINC00271-202ENST00000436554 OLFM4Q6UX06 510 aa15.57■□□□□ 0.08
LINC00271-202ENST00000436554 CLEC4GQ6UXB4 293 aa15.57■□□□□ 0.08
LINC00271-202ENST00000436554 HACL1Q9UJ83 578 aa15.57■□□□□ 0.08
LINC00271-202ENST00000436554 PRAMEF22A3QJZ6 481 aa15.56■□□□□ 0.08
LINC00271-202ENST00000436554 CNTROBQ8N137 903 aa15.56■□□□□ 0.08
LINC00271-202ENST00000436554 ZNF541Q9H0D2 1346 aa15.56■□□□□ 0.08
LINC00271-202ENST00000436554 DICER1Q9UPY3 1922 aaKnown RBP15.56■□□□□ 0.08
LINC00271-202ENST00000436554 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
LINC00271-202ENST00000436554 KLRG2A4D1S0 409 aaPredicted RBP15.55■□□□□ 0.08
LINC00271-202ENST00000436554 EPHX2P34913 555 aa15.55■□□□□ 0.08
LINC00271-202ENST00000436554 DEFB115Q30KQ5 88 aa15.55■□□□□ 0.08
LINC00271-202ENST00000436554 TPTE2Q6XPS3 522 aa15.55■□□□□ 0.08
LINC00271-202ENST00000436554 SYNE4Q8N205 404 aa15.55■□□□□ 0.08
LINC00271-202ENST00000436554 PHACTR3Q96KR7 559 aa15.55■□□□□ 0.08
LINC00271-202ENST00000436554 UBR2Q8IWV8 1755 aa15.54■□□□□ 0.08
LINC00271-202ENST00000436554 FAM177BA6PVY3 158 aa15.54■□□□□ 0.08
LINC00271-202ENST00000436554 MAP1SQ66K74 1059 aaPredicted RBP15.54■□□□□ 0.08
LINC00271-202ENST00000436554 RTKN2Q8IZC4 609 aa15.54■□□□□ 0.08
LINC00271-202ENST00000436554 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
LINC00271-202ENST00000436554 COL11A2P13942 1736 aaPredicted RBP15.54■□□□□ 0.08
LINC00271-202ENST00000436554 FZD9O00144 591 aa15.53■□□□□ 0.08
LINC00271-202ENST00000436554 PNMA8AQ86V59 439 aaPredicted RBP15.53■□□□□ 0.08
LINC00271-202ENST00000436554 NIP7Q9Y221 180 aaKnown RBP eCLIP15.53■□□□□ 0.08
LINC00271-202ENST00000436554 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
LINC00271-202ENST00000436554 CEMIPQ8WUJ3 1361 aa15.52■□□□□ 0.08
LINC00271-202ENST00000436554 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.08
LINC00271-202ENST00000436554 RASSF10A6NK89 507 aa15.52■□□□□ 0.08
LINC00271-202ENST00000436554 SNRPA1P09661 255 aaKnown RBP15.52■□□□□ 0.08
LINC00271-202ENST00000436554 IARSP41252 1262 aaKnown RBP15.52■□□□□ 0.08
LINC00271-202ENST00000436554 VIRMAQ69YN4 1812 aaKnown RBP15.52■□□□□ 0.07
LINC00271-202ENST00000436554 NBPF26B4DH59 902 aa15.51■□□□□ 0.07
LINC00271-202ENST00000436554 HSPA8P11142 646 aaKnown RBP15.51■□□□□ 0.07
LINC00271-202ENST00000436554 ALDH1B1P30837 517 aa15.51■□□□□ 0.07
LINC00271-202ENST00000436554 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
LINC00271-202ENST00000436554 NBPF10Q6P3W6 841 aaKnown RBP15.51■□□□□ 0.07
LINC00271-202ENST00000436554 NBPF15Q8N660 670 aa15.51■□□□□ 0.07
LINC00271-202ENST00000436554 WDR33Q9C0J8 1336 aaKnown RBP15.5■□□□□ 0.07
LINC00271-202ENST00000436554 GTF2E1P29083 439 aaPredicted RBP15.5■□□□□ 0.07
LINC00271-202ENST00000436554 HLFQ16534 295 aa15.5■□□□□ 0.07
LINC00271-202ENST00000436554 GPC2Q8N158 579 aa15.5■□□□□ 0.07
LINC00271-202ENST00000436554 ABT1Q9ULW3 272 aaKnown RBP15.5■□□□□ 0.07
LINC00271-202ENST00000436554 SCN7AQ01118 1682 aa15.5■□□□□ 0.07
LINC00271-202ENST00000436554 MAP2K1Q02750 393 aaPredicted RBP15.49■□□□□ 0.07
LINC00271-202ENST00000436554 MCM10Q7L590 875 aa15.49■□□□□ 0.07
LINC00271-202ENST00000436554 JDP2Q8WYK2 163 aa15.49■□□□□ 0.07
LINC00271-202ENST00000436554 ABHD8Q96I13 439 aa15.49■□□□□ 0.07
LINC00271-202ENST00000436554 RSPH6AQ9H0K4 717 aa15.49■□□□□ 0.07
LINC00271-202ENST00000436554 GJA3Q9Y6H8 435 aa15.49■□□□□ 0.07
LINC00271-202ENST00000436554 SCN4AP35499 1836 aa15.48■□□□□ 0.07
LINC00271-202ENST00000436554 FMR1Q06787 632 aaKnown RBP eCLIP15.48■□□□□ 0.07
LINC00271-202ENST00000436554 DDX21Q9NR30 783 aaKnown RBP eCLIP15.48■□□□□ 0.07
LINC00271-202ENST00000436554 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
LINC00271-202ENST00000436554 RGL2O15211 777 aa15.47■□□□□ 0.07
LINC00271-202ENST00000436554 EIF6P56537 245 aaKnown RBP15.47■□□□□ 0.07
LINC00271-202ENST00000436554 DCTN1Q14203 1278 aa15.47■□□□□ 0.07
LINC00271-202ENST00000436554 RTF1Q92541 710 aaKnown RBP15.47■□□□□ 0.07
LINC00271-202ENST00000436554 NUTM1Q86Y26 1132 aa15.46■□□□□ 0.07
LINC00271-202ENST00000436554 NGEFQ8N5V2 710 aa15.46■□□□□ 0.07
LINC00271-202ENST00000436554 PSMD1Q99460 953 aa15.46■□□□□ 0.07
LINC00271-202ENST00000436554 MIS18AQ9NYP9 233 aa15.46■□□□□ 0.07
LINC00271-202ENST00000436554 CACNA1SQ13698 1873 aa15.46■□□□□ 0.06
LINC00271-202ENST00000436554 EPS15P42566 896 aa15.45■□□□□ 0.06
LINC00271-202ENST00000436554 FAM161AQ3B820 660 aa15.45■□□□□ 0.06
LINC00271-202ENST00000436554 U2AF1L5P0DN76 240 aaPredicted RBP15.44■□□□□ 0.06
LINC00271-202ENST00000436554 LMOD1P29536 600 aaPredicted RBP15.44■□□□□ 0.06
LINC00271-202ENST00000436554 U2AF1Q01081 240 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00271-202ENST00000436554 GRM1Q13255 1194 aa15.44■□□□□ 0.06
LINC00271-202ENST00000436554 CRY2Q49AN0 593 aa15.44■□□□□ 0.06
LINC00271-202ENST00000436554 CST9Q5W186 159 aa15.44■□□□□ 0.06
LINC00271-202ENST00000436554 CC2D2BQ6DHV5 1058 aa15.44■□□□□ 0.06
LINC00271-202ENST00000436554 PAXIP1Q6ZW49 1069 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms