RNA–Protein interactions for RNA: ENST00000436359.1

AP001048.1-201, humanhuman

TSL 2 BASIC

Gene AP001048.1, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001048.1-201ENST00000436359 PLEKHF1Q96S99 279 aa9.72□□□□□ -0.85
AP001048.1-201ENST00000436359 COL4A5P29400 1685 aa9.71□□□□□ -0.85
AP001048.1-201ENST00000436359 PSME4Q14997 1843 aa9.71□□□□□ -0.85
AP001048.1-201ENST00000436359 BTBD11A6QL63 1104 aa9.71□□□□□ -0.86
AP001048.1-201ENST00000436359 NBPF26B4DH59 902 aa9.71□□□□□ -0.86
AP001048.1-201ENST00000436359 H0YIN7 160 aa9.71□□□□□ -0.86
AP001048.1-201ENST00000436359 A1BGP04217 495 aa9.71□□□□□ -0.86
AP001048.1-201ENST00000436359 NBPF10Q6P3W6 841 aaKnown RBP9.71□□□□□ -0.86
AP001048.1-201ENST00000436359 C2CD5Q86YS7 1000 aa9.71□□□□□ -0.86
AP001048.1-201ENST00000436359 NBPF15Q8N660 670 aa9.71□□□□□ -0.86
AP001048.1-201ENST00000436359 NUDCQ9Y266 331 aa9.71□□□□□ -0.86
AP001048.1-201ENST00000436359 USP16Q9Y5T5 823 aa9.71□□□□□ -0.86
AP001048.1-201ENST00000436359 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
AP001048.1-201ENST00000436359 SNRPA1P09661 255 aaKnown RBP9.7□□□□□ -0.86
AP001048.1-201ENST00000436359 DZIP3Q86Y13 1208 aaKnown RBP9.7□□□□□ -0.86
AP001048.1-201ENST00000436359 CNBD1Q8NA66 436 aa9.7□□□□□ -0.86
AP001048.1-201ENST00000436359 SMC1BQ8NDV3 1235 aa9.7□□□□□ -0.86
AP001048.1-201ENST00000436359 KLRG1Q96E93 195 aa9.7□□□□□ -0.86
AP001048.1-201ENST00000436359 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
AP001048.1-201ENST00000436359 CRY2Q49AN0 593 aa9.69□□□□□ -0.86
AP001048.1-201ENST00000436359 SOGA3Q5TF21 947 aa9.69□□□□□ -0.86
AP001048.1-201ENST00000436359 PRPF40BQ6NWY9 871 aaKnown RBP9.69□□□□□ -0.86
AP001048.1-201ENST00000436359 LRP10Q7Z4F1 713 aa9.69□□□□□ -0.86
AP001048.1-201ENST00000436359 ABCC12Q96J65 1359 aa9.69□□□□□ -0.86
AP001048.1-201ENST00000436359 L3MBTL3Q96JM7 780 aaPredicted RBP9.69□□□□□ -0.86
AP001048.1-201ENST00000436359 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
AP001048.1-201ENST00000436359 DUOX1Q9NRD9 1551 aa9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 U2AF1L5P0DN76 240 aaPredicted RBP9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 VEGFAP15692 232 aaPredicted RBP9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 U2AF1Q01081 240 aaKnown RBP eCLIP9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 MCM10Q7L590 875 aa9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 CNKSR1Q969H4 720 aa9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 MASTLQ96GX5 879 aa9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 SETDB2Q96T68 719 aa9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 TAOK3Q9H2K8 898 aa9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 ZNF652Q9Y2D9 606 aa9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 TAF1P21675 1872 aa9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 ZNF646O15015 1829 aaPredicted RBP9.68□□□□□ -0.86
AP001048.1-201ENST00000436359 ST5P78524 1137 aa9.67□□□□□ -0.86
AP001048.1-201ENST00000436359 TAF7Q15545 349 aaPredicted RBP9.67□□□□□ -0.86
AP001048.1-201ENST00000436359 RRAGCQ9HB90 399 aa9.67□□□□□ -0.86
AP001048.1-201ENST00000436359 CACNA1FO60840 1977 aa9.66□□□□□ -0.86
AP001048.1-201ENST00000436359 MYH3P11055 1940 aa9.66□□□□□ -0.86
AP001048.1-201ENST00000436359 ERVV-1B6SEH8 477 aa9.66□□□□□ -0.86
AP001048.1-201ENST00000436359 BICDL1Q6ZP65 573 aa9.66□□□□□ -0.86
AP001048.1-201ENST00000436359 PNISRQ8TF01 805 aaKnown RBP9.66□□□□□ -0.86
AP001048.1-201ENST00000436359 RTF1Q92541 710 aaKnown RBP9.66□□□□□ -0.86
AP001048.1-201ENST00000436359 MAP3K15Q6ZN16 1313 aa9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 UBN2Q6ZU65 1347 aa9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 PASKQ96RG2 1323 aa9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 C21orf2O43822 256 aa9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 NPR1P16066 1061 aa9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 EIF4A1P60842 406 aaKnown RBP9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 DCTN1Q14203 1278 aa9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 NFE2L2Q16236 605 aa9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 CCDC93Q567U6 631 aa9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 C16orf71Q8IYS4 520 aaPredicted RBP9.65□□□□□ -0.86
AP001048.1-201ENST00000436359 RNF123Q5XPI4 1314 aa9.64□□□□□ -0.87
AP001048.1-201ENST00000436359 HOXA10P31260 410 aaPredicted RBP9.64□□□□□ -0.87
AP001048.1-201ENST00000436359 PIP4K2AP48426 406 aaPredicted RBP9.64□□□□□ -0.87
AP001048.1-201ENST00000436359 FKBP4Q02790 459 aaKnown RBP eCLIP9.64□□□□□ -0.87
AP001048.1-201ENST00000436359 ERFEQ4G0M1 354 aa9.64□□□□□ -0.87
AP001048.1-201ENST00000436359 NBPF5PQ86XG9 351 aaPredicted RBP9.64□□□□□ -0.87
AP001048.1-201ENST00000436359 PSMD1Q99460 953 aa9.64□□□□□ -0.87
AP001048.1-201ENST00000436359 BABAM1Q9NWV8 329 aa9.64□□□□□ -0.87
AP001048.1-201ENST00000436359 HTRA3P83110 453 aa9.63□□□□□ -0.87
AP001048.1-201ENST00000436359 HLFQ16534 295 aa9.63□□□□□ -0.87
AP001048.1-201ENST00000436359 CCDC24Q8N4L8 307 aa9.63□□□□□ -0.87
AP001048.1-201ENST00000436359 ZNF622Q969S3 477 aaKnown RBP eCLIP9.63□□□□□ -0.87
AP001048.1-201ENST00000436359 NIP7Q9Y221 180 aaKnown RBP eCLIP9.63□□□□□ -0.87
AP001048.1-201ENST00000436359 COL4A1P02462 1669 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 FZD9O00144 591 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 NTSR2O95665 410 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 PDIA6Q15084 440 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 DPY19L2Q6NUT2 758 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 TPTE2Q6XPS3 522 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 ZNF34Q8IZ26 560 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 ZNF330Q9Y3S2 320 aaPredicted RBP9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 SCN9AQ15858 1988 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 CNTNAP1P78357 1384 aa9.62□□□□□ -0.87
AP001048.1-201ENST00000436359 ZNF541Q9H0D2 1346 aa9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 A0A1B0GUL6 1792 aa9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 LAMB1P07942 1786 aa9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 IQCA1LA6NCM1 817 aa9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 GRIPAP1Q4V328 841 aa9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 GIGYF2Q6Y7W6 1299 aaKnown RBP9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 NPM2Q86SE8 214 aaKnown RBP9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 LDHDQ86WU2 507 aa9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 RTKN2Q8IZC4 609 aa9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 NYXQ9GZU5 481 aa9.61□□□□□ -0.87
AP001048.1-201ENST00000436359 DDNO94850 711 aaPredicted RBP9.6□□□□□ -0.87
AP001048.1-201ENST00000436359 POTEIP0CG38 1075 aa9.6□□□□□ -0.87
AP001048.1-201ENST00000436359 POTEJP0CG39 1038 aa9.6□□□□□ -0.87
AP001048.1-201ENST00000436359 ALDH1B1P30837 517 aa9.6□□□□□ -0.87
AP001048.1-201ENST00000436359 RALBP1Q15311 655 aa9.6□□□□□ -0.87
AP001048.1-201ENST00000436359 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
AP001048.1-201ENST00000436359 TTLL7Q6ZT98 887 aa9.6□□□□□ -0.87
AP001048.1-201ENST00000436359 TAF1DQ9H5J8 278 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms