RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 NPC1L1Q9UHC9 1359 aa24.64■■□□□ 1.53
UBXN1-203ENST00000436354 CACNA1SQ13698 1873 aa24.64■■□□□ 1.53
UBXN1-203ENST00000436354 SLX4Q8IY92 1834 aa24.63■■□□□ 1.53
UBXN1-203ENST00000436354 SRGNP10124 158 aa24.63■■□□□ 1.53
UBXN1-203ENST00000436354 PRPF40BQ6NWY9 871 aaKnown RBP24.63■■□□□ 1.53
UBXN1-203ENST00000436354 DZIP3Q86Y13 1208 aaKnown RBP24.63■■□□□ 1.53
UBXN1-203ENST00000436354 BCORQ6W2J9 1755 aa24.62■■□□□ 1.53
UBXN1-203ENST00000436354 ARFGEF2Q9Y6D5 1785 aa24.62■■□□□ 1.53
UBXN1-203ENST00000436354 BTBD11A6QL63 1104 aa24.62■■□□□ 1.53
UBXN1-203ENST00000436354 MASTLQ96GX5 879 aa24.62■■□□□ 1.53
UBXN1-203ENST00000436354 DDNO94850 711 aaPredicted RBP24.61■■□□□ 1.53
UBXN1-203ENST00000436354 CREBZFQ9NS37 354 aa24.61■■□□□ 1.53
UBXN1-203ENST00000436354 KCNQ3O43525 872 aa24.59■■□□□ 1.53
UBXN1-203ENST00000436354 CNGB1Q14028 1251 aaPredicted RBP24.59■■□□□ 1.53
UBXN1-203ENST00000436354 CLEC4GQ6UXB4 293 aa24.59■■□□□ 1.53
UBXN1-203ENST00000436354 PHACTR3Q96KR7 559 aa24.58■■□□□ 1.53
UBXN1-203ENST00000436354 ZNF652Q9Y2D9 606 aa24.58■■□□□ 1.53
UBXN1-203ENST00000436354 USP16Q9Y5T5 823 aa24.58■■□□□ 1.53
UBXN1-203ENST00000436354 IQCA1LA6NCM1 817 aa24.57■■□□□ 1.52
UBXN1-203ENST00000436354 PRKAR2BP31323 418 aa24.57■■□□□ 1.52
UBXN1-203ENST00000436354 NBPF5PQ86XG9 351 aaPredicted RBP24.57■■□□□ 1.52
UBXN1-203ENST00000436354 POTEIP0CG38 1075 aa24.56■■□□□ 1.52
UBXN1-203ENST00000436354 POTEJP0CG39 1038 aa24.56■■□□□ 1.52
UBXN1-203ENST00000436354 SCN4AP35499 1836 aa24.56■■□□□ 1.52
UBXN1-203ENST00000436354 CCDC93Q567U6 631 aa24.55■■□□□ 1.52
UBXN1-203ENST00000436354 CFAP53Q96M91 514 aa24.55■■□□□ 1.52
UBXN1-203ENST00000436354 MKRN1Q9UHC7 482 aaKnown RBP24.55■■□□□ 1.52
UBXN1-203ENST00000436354 SNRPA1P09661 255 aaKnown RBP24.54■■□□□ 1.52
UBXN1-203ENST00000436354 NPR1P16066 1061 aa24.54■■□□□ 1.52
UBXN1-203ENST00000436354 PIP4K2AP48426 406 aaPredicted RBP24.54■■□□□ 1.52
UBXN1-203ENST00000436354 C7orf43Q8WVR3 580 aa24.54■■□□□ 1.52
UBXN1-203ENST00000436354 L3MBTL3Q96JM7 780 aaPredicted RBP24.54■■□□□ 1.52
UBXN1-203ENST00000436354 RSPH6AQ9H0K4 717 aa24.54■■□□□ 1.52
UBXN1-203ENST00000436354 LDHDQ86WU2 507 aa24.53■■□□□ 1.52
UBXN1-203ENST00000436354 TPTE2Q6XPS3 522 aa24.52■■□□□ 1.52
UBXN1-203ENST00000436354 RTF1Q92541 710 aaKnown RBP24.52■■□□□ 1.52
UBXN1-203ENST00000436354 NUDCQ9Y266 331 aa24.52■■□□□ 1.52
UBXN1-203ENST00000436354 PRAMEF22A3QJZ6 481 aa24.51■■□□□ 1.51
UBXN1-203ENST00000436354 KLRG2A4D1S0 409 aaPredicted RBP24.51■■□□□ 1.51
UBXN1-203ENST00000436354 RGL2O15211 777 aa24.51■■□□□ 1.51
UBXN1-203ENST00000436354 TAF1DQ9H5J8 278 aaPredicted RBP24.51■■□□□ 1.51
UBXN1-203ENST00000436354 FKBP4Q02790 459 aaKnown RBP eCLIP24.5■■□□□ 1.51
UBXN1-203ENST00000436354 NIP7Q9Y221 180 aaKnown RBP eCLIP24.5■■□□□ 1.51
UBXN1-203ENST00000436354 PASKQ96RG2 1323 aa24.5■■□□□ 1.51
UBXN1-203ENST00000436354 RTKN2Q8IZC4 609 aa24.49■■□□□ 1.51
UBXN1-203ENST00000436354 CNTNAP1P78357 1384 aa24.49■■□□□ 1.51
UBXN1-203ENST00000436354 MCM10Q7L590 875 aa24.48■■□□□ 1.51
UBXN1-203ENST00000436354 NBPF26B4DH59 902 aa24.47■■□□□ 1.51
UBXN1-203ENST00000436354 NBPF10Q6P3W6 841 aaKnown RBP24.47■■□□□ 1.51
UBXN1-203ENST00000436354 NBPF15Q8N660 670 aa24.47■■□□□ 1.51
UBXN1-203ENST00000436354 ZNF277Q9NRM2 450 aaPredicted RBP24.47■■□□□ 1.51
UBXN1-203ENST00000436354 HACL1Q9UJ83 578 aa24.47■■□□□ 1.51
UBXN1-203ENST00000436354 U2AF1L5P0DN76 240 aaPredicted RBP24.46■■□□□ 1.51
UBXN1-203ENST00000436354 ALDH1B1P30837 517 aa24.46■■□□□ 1.51
UBXN1-203ENST00000436354 U2AF1Q01081 240 aaKnown RBP eCLIP24.46■■□□□ 1.51
UBXN1-203ENST00000436354 ZNF541Q9H0D2 1346 aa24.45■■□□□ 1.5
UBXN1-203ENST00000436354 TMEM88BA6NKF7 163 aa24.45■■□□□ 1.5
UBXN1-203ENST00000436354 ITGBL1O95965 494 aaPredicted RBP24.45■■□□□ 1.5
UBXN1-203ENST00000436354 EAPPQ56P03 285 aaPredicted RBP24.45■■□□□ 1.5
UBXN1-203ENST00000436354 FAM177BA6PVY3 158 aa24.44■■□□□ 1.5
UBXN1-203ENST00000436354 FOXN1O15353 648 aa24.44■■□□□ 1.5
UBXN1-203ENST00000436354 HTATSF1O43719 755 aaKnown RBP24.44■■□□□ 1.5
UBXN1-203ENST00000436354 GTF2E1P29083 439 aaPredicted RBP24.44■■□□□ 1.5
UBXN1-203ENST00000436354 CLEC11AQ9Y240 323 aa24.44■■□□□ 1.5
UBXN1-203ENST00000436354 EPHX2P34913 555 aa24.43■■□□□ 1.5
UBXN1-203ENST00000436354 IARSP41252 1262 aaKnown RBP24.43■■□□□ 1.5
UBXN1-203ENST00000436354 OLFM4Q6UX06 510 aa24.43■■□□□ 1.5
UBXN1-203ENST00000436354 PNMA8AQ86V59 439 aaPredicted RBP24.43■■□□□ 1.5
UBXN1-203ENST00000436354 DCTN1Q14203 1278 aa24.42■■□□□ 1.5
UBXN1-203ENST00000436354 TAF7Q15545 349 aaPredicted RBP24.42■■□□□ 1.5
UBXN1-203ENST00000436354 AIDAQ96BJ3 306 aa24.42■■□□□ 1.5
UBXN1-203ENST00000436354 PRDM10Q9NQV6 1147 aa24.42■■□□□ 1.5
UBXN1-203ENST00000436354 FZD9O00144 591 aa24.41■■□□□ 1.5
UBXN1-203ENST00000436354 VEGFBP49765 207 aa24.41■■□□□ 1.5
UBXN1-203ENST00000436354 HLFQ16534 295 aa24.41■■□□□ 1.5
UBXN1-203ENST00000436354 SYNE4Q8N205 404 aa24.41■■□□□ 1.5
UBXN1-203ENST00000436354 ADAMTSL1Q8N6G6 1762 aa24.41■■□□□ 1.5
UBXN1-203ENST00000436354 LAMB4A4D0S4 1761 aa24.39■■□□□ 1.5
UBXN1-203ENST00000436354 CTCFP49711 727 aaPredicted RBP24.39■■□□□ 1.49
UBXN1-203ENST00000436354 GPC2Q8N158 579 aa24.39■■□□□ 1.49
UBXN1-203ENST00000436354 JDP2Q8WYK2 163 aa24.39■■□□□ 1.49
UBXN1-203ENST00000436354 NYXQ9GZU5 481 aa24.39■■□□□ 1.49
UBXN1-203ENST00000436354 RNF123Q5XPI4 1314 aa24.38■■□□□ 1.49
UBXN1-203ENST00000436354 PPP2R1AP30153 589 aa24.38■■□□□ 1.49
UBXN1-203ENST00000436354 CNTROBQ8N137 903 aa24.38■■□□□ 1.49
UBXN1-203ENST00000436354 PSMD1Q99460 953 aa24.38■■□□□ 1.49
UBXN1-203ENST00000436354 CRY2Q49AN0 593 aa24.37■■□□□ 1.49
UBXN1-203ENST00000436354 CC2D2BQ6DHV5 1058 aa24.37■■□□□ 1.49
UBXN1-203ENST00000436354 ERVV-1B6SEH8 477 aa24.36■■□□□ 1.49
UBXN1-203ENST00000436354 MAP1SQ66K74 1059 aaPredicted RBP24.36■■□□□ 1.49
UBXN1-203ENST00000436354 NUP98P52948 1817 aa24.35■■□□□ 1.49
UBXN1-203ENST00000436354 RASSF10A6NK89 507 aa24.35■■□□□ 1.49
UBXN1-203ENST00000436354 DEFB115Q30KQ5 88 aa24.35■■□□□ 1.49
UBXN1-203ENST00000436354 WBP1LQ9NX94 342 aa24.35■■□□□ 1.49
UBXN1-203ENST00000436354 MIS18AQ9NYP9 233 aa24.35■■□□□ 1.49
UBXN1-203ENST00000436354 SNED1Q8TER0 1413 aa24.35■■□□□ 1.49
UBXN1-203ENST00000436354 EIF6P56537 245 aaKnown RBP24.34■■□□□ 1.49
UBXN1-203ENST00000436354 NUTM1Q86Y26 1132 aa24.34■■□□□ 1.49
UBXN1-203ENST00000436354 NGEFQ8N5V2 710 aa24.34■■□□□ 1.49
UBXN1-203ENST00000436354 PNISRQ8TF01 805 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms