RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 HTATSF1O43719 755 aaKnown RBP8.66□□□□□ -1.02
GARNL3-205ENST00000435213 USP8P40818 1118 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 BMS1Q14692 1282 aaKnown RBP8.66□□□□□ -1.02
GARNL3-205ENST00000435213 KDM4CQ9H3R0 1056 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 CAMSAP1Q5T5Y3 1602 aa8.65□□□□□ -1.02
GARNL3-205ENST00000435213 RBM5P52756 815 aaKnown RBP eCLIP8.65□□□□□ -1.02
GARNL3-205ENST00000435213 ARHGAP45Q92619 1136 aa8.65□□□□□ -1.02
GARNL3-205ENST00000435213 ARHGEF1Q92888 912 aaKnown RBP8.65□□□□□ -1.02
GARNL3-205ENST00000435213 FOXD4L1Q9NU39 408 aa8.65□□□□□ -1.02
GARNL3-205ENST00000435213 ETAA1Q9NY74 926 aa8.65□□□□□ -1.02
GARNL3-205ENST00000435213 FAM53CQ9NYF3 392 aa8.65□□□□□ -1.02
GARNL3-205ENST00000435213 LRRC7Q96NW7 1537 aa8.65□□□□□ -1.02
GARNL3-205ENST00000435213 ANKRD45Q5TZF3 282 aa8.65□□□□□ -1.02
GARNL3-205ENST00000435213 LMBRD1Q9NUN5 540 aa8.65□□□□□ -1.02
GARNL3-205ENST00000435213 CPSF2Q9P2I0 782 aaKnown RBP8.65□□□□□ -1.02
GARNL3-205ENST00000435213 AGLP35573 1532 aa8.65□□□□□ -1.03
GARNL3-205ENST00000435213 CAND2O75155 1236 aa8.65□□□□□ -1.03
GARNL3-205ENST00000435213 ATG3Q9NT62 314 aa8.65□□□□□ -1.03
GARNL3-205ENST00000435213 TRAK1Q9UPV9 953 aa8.65□□□□□ -1.03
GARNL3-205ENST00000435213 RPGRIP1LQ68CZ1 1315 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 ANKRD18BA2A2Z9 1011 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 KDM4AO75164 1064 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 SMC2O95347 1197 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 TRAF1Q13077 416 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 DNAJC14Q6Y2X3 702 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-205ENST00000435213 KIF1BPQ96EK5 621 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 ZFYVE9O95405 1425 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 KNDC1Q76NI1 1749 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 POGZQ7Z3K3 1410 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 KIF3BO15066 747 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 ZBTB7BO15156 539 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-205ENST00000435213 SF3A1Q15459 793 aaKnown RBP8.64□□□□□ -1.03
GARNL3-205ENST00000435213 UVSSAQ2YD98 709 aa8.64□□□□□ -1.03
GARNL3-205ENST00000435213 CAVIN1Q6NZI2 390 aaKnown RBP8.64□□□□□ -1.03
GARNL3-205ENST00000435213 LRRFIP2Q9Y608 721 aaKnown RBP8.64□□□□□ -1.03
GARNL3-205ENST00000435213 V9GYY5 206 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-205ENST00000435213 KIF24Q5T7B8 1368 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 ABCD1P33897 745 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 FOXD4L6Q3SYB3 417 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-205ENST00000435213 FOXD4L3Q6VB84 417 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-205ENST00000435213 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
GARNL3-205ENST00000435213 SCP2P22307 547 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 ADCY2Q08462 1091 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 MYBPC2Q14324 1141 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 PACS2Q86VP3 889 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 GIMAP7Q8NHV1 300 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 GOLGA5Q8TBA6 731 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 SMTNL1A8MU46 457 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
GARNL3-205ENST00000435213 WWC2Q6AWC2 1192 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 ARHGEF40Q8TER5 1519 aa8.63□□□□□ -1.03
GARNL3-205ENST00000435213 ABCC4O15439 1325 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 PRIM1P49642 420 aaKnown RBP8.62□□□□□ -1.03
GARNL3-205ENST00000435213 FAM177A1Q8N128 213 aaPredicted RBP8.62□□□□□ -1.03
GARNL3-205ENST00000435213 FBXO18Q8NFZ0 1043 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 DNAAF4Q8WXU2 420 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 FAM135BQ49AJ0 1406 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 PNPLA6Q8IY17 1366 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 PLEKHG2Q9H7P9 1386 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 IVLP07476 585 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 ZRSR1Q15695 479 aaKnown RBP8.62□□□□□ -1.03
GARNL3-205ENST00000435213 LRSAM1Q6UWE0 723 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 AK7Q96M32 723 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 SH3GL3Q99963 347 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 NUB1Q9Y5A7 615 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 A0A1W2PP64 1363 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 RWDD2BP57060 319 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 RNF20Q5VTR2 975 aa8.62□□□□□ -1.03
GARNL3-205ENST00000435213 NEXMIFQ5QGS0 1516 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 NEBLO76041 1014 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 TTC19Q6DKK2 380 aaPredicted RBP8.61□□□□□ -1.03
GARNL3-205ENST00000435213 TMX4Q9H1E5 349 aaPredicted RBP8.61□□□□□ -1.03
GARNL3-205ENST00000435213 GOLGA6CA6NDK9 693 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 GOLGA6BA6NDN3 693 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 GOLGA6DP0CG33 693 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 DDX46Q7L014 1031 aaKnown RBP8.61□□□□□ -1.03
GARNL3-205ENST00000435213 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
GARNL3-205ENST00000435213 NEK11Q8NG66 645 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 GOLGA6AQ9NYA3 693 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 LCMT1Q9UIC8 334 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 DLG5Q8TDM6 1919 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 ST18O60284 1047 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 MBD3O95983 291 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 CHGAP10645 457 aaKnown RBP8.61□□□□□ -1.03
GARNL3-205ENST00000435213 SLFNL1Q499Z3 407 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 SPTY2D1Q68D10 685 aaPredicted RBP8.61□□□□□ -1.03
GARNL3-205ENST00000435213 INTS3Q68E01 1043 aaKnown RBP8.61□□□□□ -1.03
GARNL3-205ENST00000435213 CCDC112Q8NEF3 446 aa8.61□□□□□ -1.03
GARNL3-205ENST00000435213 KINO60870 393 aaKnown RBP8.6□□□□□ -1.03
GARNL3-205ENST00000435213 GSPT1P15170 499 aaKnown RBP8.6□□□□□ -1.03
GARNL3-205ENST00000435213 TTC22Q5TAA0 569 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 NAIF1Q69YI7 327 aaPredicted RBP8.6□□□□□ -1.03
GARNL3-205ENST00000435213 NUTM1Q86Y26 1132 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 ESF1Q9H501 851 aaKnown RBP8.6□□□□□ -1.03
GARNL3-205ENST00000435213 PPFIA2O75334 1257 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 CD151P48509 253 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 HDGFL1Q5TGJ6 251 aa8.6□□□□□ -1.03
GARNL3-205ENST00000435213 USP26Q9BXU7 913 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms