RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 CAMTA2O94983 1202 aa24.34■■□□□ 1.49
SMG1P3-201ENST00000435197 SRGNP10124 158 aa24.34■■□□□ 1.49
SMG1P3-201ENST00000435197 ST5P78524 1137 aa24.34■■□□□ 1.49
SMG1P3-201ENST00000435197 PASKQ96RG2 1323 aa24.34■■□□□ 1.49
SMG1P3-201ENST00000435197 COL3A1P02461 1466 aaPredicted RBP24.33■■□□□ 1.49
SMG1P3-201ENST00000435197 IQCA1LA6NCM1 817 aa24.33■■□□□ 1.49
SMG1P3-201ENST00000435197 NPHP1O15259 732 aa24.33■■□□□ 1.49
SMG1P3-201ENST00000435197 IL17REQ8NFR9 667 aa24.33■■□□□ 1.49
SMG1P3-201ENST00000435197 MASTLQ96GX5 879 aa24.33■■□□□ 1.49
SMG1P3-201ENST00000435197 LDHDQ86WU2 507 aa24.32■■□□□ 1.48
SMG1P3-201ENST00000435197 L3MBTL3Q96JM7 780 aaPredicted RBP24.32■■□□□ 1.48
SMG1P3-201ENST00000435197 ADAMTSL1Q8N6G6 1762 aa24.31■■□□□ 1.48
SMG1P3-201ENST00000435197 GNAT3A8MTJ3 354 aa24.31■■□□□ 1.48
SMG1P3-201ENST00000435197 A1BGP04217 495 aa24.31■■□□□ 1.48
SMG1P3-201ENST00000435197 FMNL2Q96PY5 1086 aa24.31■■□□□ 1.48
SMG1P3-201ENST00000435197 NPM2Q86SE8 214 aaKnown RBP24.3■■□□□ 1.48
SMG1P3-201ENST00000435197 GAS2L2Q8NHY3 880 aa24.3■■□□□ 1.48
SMG1P3-201ENST00000435197 TAF1DQ9H5J8 278 aaPredicted RBP24.3■■□□□ 1.48
SMG1P3-201ENST00000435197 PRDM10Q9NQV6 1147 aa24.3■■□□□ 1.48
SMG1P3-201ENST00000435197 DZIP3Q86Y13 1208 aaKnown RBP24.28■■□□□ 1.48
SMG1P3-201ENST00000435197 C7orf43Q8WVR3 580 aa24.28■■□□□ 1.48
SMG1P3-201ENST00000435197 CEMIPQ8WUJ3 1361 aa24.28■■□□□ 1.48
SMG1P3-201ENST00000435197 CCDC93Q567U6 631 aa24.27■■□□□ 1.48
SMG1P3-201ENST00000435197 TMEM88BA6NKF7 163 aa24.26■■□□□ 1.47
SMG1P3-201ENST00000435197 VEGFBP49765 207 aa24.26■■□□□ 1.47
SMG1P3-201ENST00000435197 CC2D1BQ5T0F9 858 aaKnown RBP24.26■■□□□ 1.47
SMG1P3-201ENST00000435197 AIDAQ96BJ3 306 aa24.26■■□□□ 1.47
SMG1P3-201ENST00000435197 ZNF541Q9H0D2 1346 aa24.26■■□□□ 1.47
SMG1P3-201ENST00000435197 U2SURPO15042 1029 aaKnown RBP24.25■■□□□ 1.47
SMG1P3-201ENST00000435197 KCNQ3O43525 872 aa24.25■■□□□ 1.47
SMG1P3-201ENST00000435197 ITGBL1O95965 494 aaPredicted RBP24.25■■□□□ 1.47
SMG1P3-201ENST00000435197 CTCFP49711 727 aaPredicted RBP24.25■■□□□ 1.47
SMG1P3-201ENST00000435197 NBPF5PQ86XG9 351 aaPredicted RBP24.25■■□□□ 1.47
SMG1P3-201ENST00000435197 PER1O15534 1290 aaPredicted RBP24.24■■□□□ 1.47
SMG1P3-201ENST00000435197 FKBP4Q02790 459 aaKnown RBP eCLIP24.24■■□□□ 1.473e-6■□□□□ 11
SMG1P3-201ENST00000435197 EAPPQ56P03 285 aaPredicted RBP24.24■■□□□ 1.47
SMG1P3-201ENST00000435197 NPR1P16066 1061 aa24.23■■□□□ 1.47
SMG1P3-201ENST00000435197 PIP4K2AP48426 406 aaPredicted RBP24.23■■□□□ 1.47
SMG1P3-201ENST00000435197 BTBD11A6QL63 1104 aa24.22■■□□□ 1.47
SMG1P3-201ENST00000435197 CLEC4GQ6UXB4 293 aa24.22■■□□□ 1.47
SMG1P3-201ENST00000435197 ZNF277Q9NRM2 450 aaPredicted RBP24.22■■□□□ 1.47
SMG1P3-201ENST00000435197 HACL1Q9UJ83 578 aa24.22■■□□□ 1.47
SMG1P3-201ENST00000435197 KLRG2A4D1S0 409 aaPredicted RBP24.21■■□□□ 1.47
SMG1P3-201ENST00000435197 WBP1LQ9NX94 342 aa24.21■■□□□ 1.47
SMG1P3-201ENST00000435197 ZNF652Q9Y2D9 606 aa24.21■■□□□ 1.47
SMG1P3-201ENST00000435197 USP16Q9Y5T5 823 aa24.21■■□□□ 1.47
SMG1P3-201ENST00000435197 EPHX2P34913 555 aa24.2■■□□□ 1.46
SMG1P3-201ENST00000435197 OLFM4Q6UX06 510 aa24.2■■□□□ 1.46
SMG1P3-201ENST00000435197 CLEC11AQ9Y240 323 aa24.2■■□□□ 1.46
SMG1P3-201ENST00000435197 RNF123Q5XPI4 1314 aa24.18■■□□□ 1.46
SMG1P3-201ENST00000435197 PRAMEF22A3QJZ6 481 aa24.18■■□□□ 1.46
SMG1P3-201ENST00000435197 LBX1P52954 281 aa24.18■■□□□ 1.46
SMG1P3-201ENST00000435197 RTKN2Q8IZC4 609 aa24.18■■□□□ 1.46
SMG1P3-201ENST00000435197 RASSF10A6NK89 507 aa24.17■■□□□ 1.46
SMG1P3-201ENST00000435197 PNMA8AQ86V59 439 aaPredicted RBP24.17■■□□□ 1.46
SMG1P3-201ENST00000435197 PHACTR3Q96KR7 559 aa24.17■■□□□ 1.46
SMG1P3-201ENST00000435197 NPC1L1Q9UHC9 1359 aa24.16■■□□□ 1.46
SMG1P3-201ENST00000435197 IARSP41252 1262 aaKnown RBP24.16■■□□□ 1.46
SMG1P3-201ENST00000435197 DDX10Q13206 875 aaKnown RBP24.16■■□□□ 1.46
SMG1P3-201ENST00000435197 TPTE2Q6XPS3 522 aa24.16■■□□□ 1.46
SMG1P3-201ENST00000435197 NIP7Q9Y221 180 aaKnown RBP eCLIP24.16■■□□□ 1.46
SMG1P3-201ENST00000435197 THSD7BQ9C0I4 1608 aa24.16■■□□□ 1.46
SMG1P3-201ENST00000435197 LAMB4A4D0S4 1761 aa24.16■■□□□ 1.46
SMG1P3-201ENST00000435197 FZD9O00144 591 aa24.15■■□□□ 1.46
SMG1P3-201ENST00000435197 RGL2O15211 777 aa24.15■■□□□ 1.46
SMG1P3-201ENST00000435197 SNRPA1P09661 255 aaKnown RBP24.15■■□□□ 1.46
SMG1P3-201ENST00000435197 PRKAR2BP31323 418 aa24.15■■□□□ 1.46
SMG1P3-201ENST00000435197 MAP1SQ66K74 1059 aaPredicted RBP24.15■■□□□ 1.46
SMG1P3-201ENST00000435197 CNTROBQ8N137 903 aa24.15■■□□□ 1.46
SMG1P3-201ENST00000435197 SNED1Q8TER0 1413 aa24.15■■□□□ 1.46
SMG1P3-201ENST00000435197 HSPA8P11142 646 aaKnown RBP24.14■■□□□ 1.45
SMG1P3-201ENST00000435197 LTBP1Q14766 1721 aa24.14■■□□□ 1.45
SMG1P3-201ENST00000435197 DEFB115Q30KQ5 88 aa24.14■■□□□ 1.45
SMG1P3-201ENST00000435197 NBPF26B4DH59 902 aa24.13■■□□□ 1.45
SMG1P3-201ENST00000435197 NBPF10Q6P3W6 841 aaKnown RBP24.13■■□□□ 1.45
SMG1P3-201ENST00000435197 GPC2Q8N158 579 aa24.13■■□□□ 1.45
SMG1P3-201ENST00000435197 SYNE4Q8N205 404 aa24.13■■□□□ 1.45
SMG1P3-201ENST00000435197 NBPF15Q8N660 670 aa24.13■■□□□ 1.45
SMG1P3-201ENST00000435197 RSPH6AQ9H0K4 717 aa24.13■■□□□ 1.45
SMG1P3-201ENST00000435197 FAM177BA6PVY3 158 aa24.12■■□□□ 1.45
SMG1P3-201ENST00000435197 ALDH1B1P30837 517 aa24.12■■□□□ 1.45
SMG1P3-201ENST00000435197 COL4A5P29400 1685 aa24.11■■□□□ 1.45
SMG1P3-201ENST00000435197 WDR33Q9C0J8 1336 aaKnown RBP24.11■■□□□ 1.45
SMG1P3-201ENST00000435197 CNGB1Q14028 1251 aaPredicted RBP24.11■■□□□ 1.45
SMG1P3-201ENST00000435197 NUP98P52948 1817 aa24.11■■□□□ 1.45
SMG1P3-201ENST00000435197 TRPM7Q96QT4 1865 aa24.11■■□□□ 1.45
SMG1P3-201ENST00000435197 ABHD8Q96I13 439 aa24.1■■□□□ 1.45
SMG1P3-201ENST00000435197 PSMD1Q99460 953 aa24.1■■□□□ 1.45
SMG1P3-201ENST00000435197 ABT1Q9ULW3 272 aaKnown RBP24.1■■□□□ 1.45
SMG1P3-201ENST00000435197 MAP2K1Q02750 393 aaPredicted RBP24.09■■□□□ 1.45
SMG1P3-201ENST00000435197 MCM10Q7L590 875 aa24.09■■□□□ 1.45
SMG1P3-201ENST00000435197 JDP2Q8WYK2 163 aa24.09■■□□□ 1.45
SMG1P3-201ENST00000435197 ABCC12Q96J65 1359 aa24.08■■□□□ 1.45
SMG1P3-201ENST00000435197 HLFQ16534 295 aa24.08■■□□□ 1.45
SMG1P3-201ENST00000435197 GTF2E1P29083 439 aaPredicted RBP24.07■■□□□ 1.44
SMG1P3-201ENST00000435197 CRY2Q49AN0 593 aa24.07■■□□□ 1.44
SMG1P3-201ENST00000435197 RTF1Q92541 710 aaKnown RBP24.07■■□□□ 1.44
SMG1P3-201ENST00000435197 DDX21Q9NR30 783 aaKnown RBP eCLIP24.07■■□□□ 1.44
SMG1P3-201ENST00000435197 EIF6P56537 245 aaKnown RBP24.06■■□□□ 1.44
SMG1P3-201ENST00000435197 GJA3Q9Y6H8 435 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms