RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 U2AF1L5P0DN76 240 aaPredicted RBP27.6■■■□□ 2.01
LMBR1-210ENST00000434503 ST5P78524 1137 aa27.6■■■□□ 2.01
LMBR1-210ENST00000434503 U2AF1Q01081 240 aaKnown RBP eCLIP27.6■■■□□ 2.01
LMBR1-210ENST00000434503 STYK1Q6J9G0 422 aa27.6■■■□□ 2.01
LMBR1-210ENST00000434503 LTBP3Q9NS15 1303 aa27.6■■■□□ 2.01
LMBR1-210ENST00000434503 SRGNP10124 158 aa27.59■■■□□ 2.01
LMBR1-210ENST00000434503 PIP4K2AP48426 406 aaPredicted RBP27.59■■■□□ 2.01
LMBR1-210ENST00000434503 SLX4Q8IY92 1834 aa27.59■■■□□ 2.01
LMBR1-210ENST00000434503 PRAMEF22A3QJZ6 481 aa27.58■■■□□ 2.01
LMBR1-210ENST00000434503 TAOK3Q9H2K8 898 aa27.58■■■□□ 2.01
LMBR1-210ENST00000434503 PRPF40BQ6NWY9 871 aaKnown RBP27.57■■■□□ 2
LMBR1-210ENST00000434503 CLEC4GQ6UXB4 293 aa27.57■■■□□ 2
LMBR1-210ENST00000434503 MCM10Q7L590 875 aa27.57■■■□□ 2
LMBR1-210ENST00000434503 RTF1Q92541 710 aaKnown RBP27.57■■■□□ 2
LMBR1-210ENST00000434503 MASTLQ96GX5 879 aa27.57■■■□□ 2
LMBR1-210ENST00000434503 CACNA1SQ13698 1873 aa27.57■■■□□ 2
LMBR1-210ENST00000434503 SNRPA1P09661 255 aaKnown RBP27.56■■■□□ 2
LMBR1-210ENST00000434503 COL13A1Q5TAT6 717 aaPredicted RBP27.56■■■□□ 2
LMBR1-210ENST00000434503 ARFGEF2Q9Y6D5 1785 aa27.55■■■□□ 2
LMBR1-210ENST00000434503 SOGA3Q5TF21 947 aa27.54■■■□□ 2
LMBR1-210ENST00000434503 NBPF5PQ86XG9 351 aaPredicted RBP27.53■■■□□ 2
LMBR1-210ENST00000434503 ZNF652Q9Y2D9 606 aa27.53■■■□□ 2
LMBR1-210ENST00000434503 DDNO94850 711 aaPredicted RBP27.51■■□□□ 1.99
LMBR1-210ENST00000434503 DCTN1Q14203 1278 aa27.51■■□□□ 1.99
LMBR1-210ENST00000434503 C7orf43Q8WVR3 580 aa27.51■■□□□ 1.99
LMBR1-210ENST00000434503 NBPF26B4DH59 902 aa27.5■■□□□ 1.99
LMBR1-210ENST00000434503 HTATSF1O43719 755 aaKnown RBP27.5■■□□□ 1.99
LMBR1-210ENST00000434503 NBPF10Q6P3W6 841 aaKnown RBP27.5■■□□□ 1.99
LMBR1-210ENST00000434503 NBPF15Q8N660 670 aa27.5■■□□□ 1.99
LMBR1-210ENST00000434503 KLRG2A4D1S0 409 aaPredicted RBP27.48■■□□□ 1.99
LMBR1-210ENST00000434503 RGL2O15211 777 aa27.48■■□□□ 1.99
LMBR1-210ENST00000434503 NPR1P16066 1061 aa27.48■■□□□ 1.99
LMBR1-210ENST00000434503 CHADLQ6NUI6 762 aa27.48■■□□□ 1.99
LMBR1-210ENST00000434503 TPTE2Q6XPS3 522 aa27.48■■□□□ 1.99
LMBR1-210ENST00000434503 NIP7Q9Y221 180 aaKnown RBP eCLIP27.48■■□□□ 1.99
LMBR1-210ENST00000434503 PCNTO95613 3336 aa27.47■■□□□ 1.99
LMBR1-210ENST00000434503 POTEIP0CG38 1075 aa27.46■■□□□ 1.99
LMBR1-210ENST00000434503 POTEJP0CG39 1038 aa27.46■■□□□ 1.99
LMBR1-210ENST00000434503 TAF7Q15545 349 aaPredicted RBP27.46■■□□□ 1.99
LMBR1-210ENST00000434503 CCDC93Q567U6 631 aa27.46■■□□□ 1.99
LMBR1-210ENST00000434503 HSPA1AP0DMV8 641 aaKnown RBP27.44■■□□□ 1.98
LMBR1-210ENST00000434503 HSPA1BP0DMV9 641 aaKnown RBP27.44■■□□□ 1.98
LMBR1-210ENST00000434503 ZEB1P37275 1124 aaPredicted RBP27.44■■□□□ 1.98
LMBR1-210ENST00000434503 MIS18AQ9NYP9 233 aa27.43■■□□□ 1.98
LMBR1-210ENST00000434503 FAM177BA6PVY3 158 aa27.42■■□□□ 1.98
LMBR1-210ENST00000434503 FKBP4Q02790 459 aaKnown RBP eCLIP27.42■■□□□ 1.98
LMBR1-210ENST00000434503 HLFQ16534 295 aa27.42■■□□□ 1.98
LMBR1-210ENST00000434503 TNS4Q8IZW8 715 aa27.42■■□□□ 1.98
LMBR1-210ENST00000434503 L3MBTL3Q96JM7 780 aaPredicted RBP27.42■■□□□ 1.98
LMBR1-210ENST00000434503 CREBZFQ9NS37 354 aa27.42■■□□□ 1.98
LMBR1-210ENST00000434503 IQCA1LA6NCM1 817 aa27.41■■□□□ 1.98
LMBR1-210ENST00000434503 SCN4AP35499 1836 aa27.41■■□□□ 1.98
LMBR1-210ENST00000434503 OLFM4Q6UX06 510 aa27.4■■□□□ 1.98
LMBR1-210ENST00000434503 ZNF277Q9NRM2 450 aaPredicted RBP27.4■■□□□ 1.98
LMBR1-210ENST00000434503 NEFMP07197 916 aa27.39■■□□□ 1.98
LMBR1-210ENST00000434503 RTKN2Q8IZC4 609 aa27.39■■□□□ 1.98
LMBR1-210ENST00000434503 LAMB4A4D0S4 1761 aa27.39■■□□□ 1.98
LMBR1-210ENST00000434503 GTF2E1P29083 439 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-210ENST00000434503 ALDH1B1P30837 517 aa27.38■■□□□ 1.97
LMBR1-210ENST00000434503 TAF1DQ9H5J8 278 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-210ENST00000434503 LDHDQ86WU2 507 aa27.37■■□□□ 1.97
LMBR1-210ENST00000434503 MKRN1Q9UHC7 482 aaKnown RBP27.37■■□□□ 1.97
LMBR1-210ENST00000434503 DLG5Q8TDM6 1919 aa27.37■■□□□ 1.97
LMBR1-210ENST00000434503 PLEKHF1Q96S99 279 aa27.36■■□□□ 1.97
LMBR1-210ENST00000434503 ZNF541Q9H0D2 1346 aa27.36■■□□□ 1.97
LMBR1-210ENST00000434503 CAPN15O75808 1086 aa27.35■■□□□ 1.97
LMBR1-210ENST00000434503 DDX10Q13206 875 aaKnown RBP27.35■■□□□ 1.97
LMBR1-210ENST00000434503 NGEFQ8N5V2 710 aa27.35■■□□□ 1.97
LMBR1-210ENST00000434503 PNISRQ8TF01 805 aaKnown RBP27.35■■□□□ 1.97
LMBR1-210ENST00000434503 PASKQ96RG2 1323 aa27.35■■□□□ 1.97
LMBR1-210ENST00000434503 KDM3BQ7LBC6 1761 aa27.35■■□□□ 1.97
LMBR1-210ENST00000434503 ERVV-1B6SEH8 477 aa27.34■■□□□ 1.97
LMBR1-210ENST00000434503 NYXQ9GZU5 481 aa27.34■■□□□ 1.97
LMBR1-210ENST00000434503 NUP98P52948 1817 aa27.33■■□□□ 1.97
LMBR1-210ENST00000434503 IARSP41252 1262 aaKnown RBP27.33■■□□□ 1.97
LMBR1-210ENST00000434503 CRY2Q49AN0 593 aa27.33■■□□□ 1.97
LMBR1-210ENST00000434503 SYNE4Q8N205 404 aa27.33■■□□□ 1.97
LMBR1-210ENST00000434503 EIF4A1P60842 406 aaKnown RBP27.32■■□□□ 1.96
LMBR1-210ENST00000434503 RALBP1Q15311 655 aa27.32■■□□□ 1.96
LMBR1-210ENST00000434503 NUTM1Q86Y26 1132 aa27.32■■□□□ 1.96
LMBR1-210ENST00000434503 HACL1Q9UJ83 578 aa27.32■■□□□ 1.96
LMBR1-210ENST00000434503 RRP7AQ9Y3A4 280 aaKnown RBP27.32■■□□□ 1.96
LMBR1-210ENST00000434503 MAP3K15Q6ZN16 1313 aa27.32■■□□□ 1.96
LMBR1-210ENST00000434503 FZD9O00144 591 aa27.31■■□□□ 1.96
LMBR1-210ENST00000434503 NFE2L2Q16236 605 aa27.31■■□□□ 1.96
LMBR1-210ENST00000434503 EAPPQ56P03 285 aaPredicted RBP27.31■■□□□ 1.96
LMBR1-210ENST00000434503 ABCC12Q96J65 1359 aa27.31■■□□□ 1.96
LMBR1-210ENST00000434503 ITGBL1O95965 494 aaPredicted RBP27.3■■□□□ 1.96
LMBR1-210ENST00000434503 TTLL7Q6ZT98 887 aa27.3■■□□□ 1.96
LMBR1-210ENST00000434503 PNNQ9H307 717 aaKnown RBP27.3■■□□□ 1.96
LMBR1-210ENST00000434503 SNED1Q8TER0 1413 aa27.3■■□□□ 1.96
LMBR1-210ENST00000434503 EPHX2P34913 555 aa27.29■■□□□ 1.96
LMBR1-210ENST00000434503 KIF6Q6ZMV9 814 aa27.29■■□□□ 1.96
LMBR1-210ENST00000434503 PSMD1Q99460 953 aa27.29■■□□□ 1.96
LMBR1-210ENST00000434503 CNTNAP1P78357 1384 aa27.29■■□□□ 1.96
LMBR1-210ENST00000434503 MAPK8IP3Q9UPT6 1336 aa27.28■■□□□ 1.96
LMBR1-210ENST00000434503 THUMPD2Q9BTF0 503 aaKnown RBP27.28■■□□□ 1.96
LMBR1-210ENST00000434503 CLEC11AQ9Y240 323 aa27.28■■□□□ 1.96
LMBR1-210ENST00000434503 RNF123Q5XPI4 1314 aa27.27■■□□□ 1.96
LMBR1-210ENST00000434503 MYL6BP14649 208 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms