RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 PLEKHG1Q9ULL1 1385 aa14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 HIP1O00291 1037 aa14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 SIRT1Q96EB6 747 aa14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 RNF17Q9BXT8 1623 aaKnown RBP14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 MARCH6O60337 910 aa14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 LARP1BQ659C4 914 aaKnown RBP14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 IGHMBP2P38935 993 aaKnown RBP14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 LMTK3Q96Q04 1460 aa14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 ZNF335Q9H4Z2 1342 aaPredicted RBP14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 NRDCO43847 1150 aa14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 CLSTN1O94985 981 aa14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 CDK11BP21127 795 aaKnown RBP14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 GUCY1B3Q02153 619 aa14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 PROSER3Q2NL68 480 aa14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 NUP133Q8WUM0 1156 aa14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 ZPR1O75312 459 aa14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 EIF4A1P60842 406 aaKnown RBP14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 TRMT2AQ8IZ69 625 aaKnown RBP14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 UBE2Q2Q8WVN8 375 aa14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 CCDC39Q9UFE4 941 aa14.85□□□□□ -0.03
LRRTM1-206ENST00000433224 PES1O00541 588 aaKnown RBP14.84□□□□□ -0.03
LRRTM1-206ENST00000433224 TOM1O60784 492 aa14.84□□□□□ -0.03
LRRTM1-206ENST00000433224 CPA1P15085 419 aa14.84□□□□□ -0.03
LRRTM1-206ENST00000433224 TIMM10P62072 90 aa14.84□□□□□ -0.03
LRRTM1-206ENST00000433224 DDX21Q9NR30 783 aaKnown RBP eCLIP14.84□□□□□ -0.03
LRRTM1-206ENST00000433224 BECN2A8MW95 431 aa14.84□□□□□ -0.03
LRRTM1-206ENST00000433224 PRIM1P49642 420 aaKnown RBP14.84□□□□□ -0.03
LRRTM1-206ENST00000433224 ZNF594Q96JF6 807 aaPredicted RBP14.84□□□□□ -0.03
LRRTM1-206ENST00000433224 MINDY4BA8MYZ0 360 aa14.83□□□□□ -0.03
LRRTM1-206ENST00000433224 MBD3O95983 291 aa14.83□□□□□ -0.03
LRRTM1-206ENST00000433224 TDO2P48775 406 aa14.83□□□□□ -0.03
LRRTM1-206ENST00000433224 E9PCH4 1651 aa14.83□□□□□ -0.03
LRRTM1-206ENST00000433224 CFAP74Q9C0B2 1584 aa14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 UQCRHLA0A096LP55 91 aa14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 UQCRHP07919 91 aa14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 CLCN1P35523 988 aa14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 ATP2B2Q01814 1243 aa14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 FAM182BQ5T319 152 aa14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 DNAJC10Q8IXB1 793 aa14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 RBM27Q9P2N5 1060 aaKnown RBP14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 TSPY26PQ9H489 355 aa14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 TRPM1Q7Z4N2 1603 aa14.83□□□□□ -0.04
LRRTM1-206ENST00000433224 BAG4O95429 457 aaKnown RBP14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 NLRP1Q9C000 1473 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 USP6P35125 1406 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 CCT2P78371 535 aaKnown RBP14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 AXIN2Q9Y2T1 843 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 ANKRD18BA2A2Z9 1011 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 ARHGEF25Q86VW2 580 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 AMOTL1Q8IY63 956 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 NECAB1Q8N987 351 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 UNC13BO14795 1591 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 KCNQ4P56696 695 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 SPC24Q8NBT2 197 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 AIDAQ96BJ3 306 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 JAG2Q9Y219 1238 aa14.82□□□□□ -0.04
LRRTM1-206ENST00000433224 ABCA9Q8IUA7 1624 aa14.81□□□□□ -0.04
LRRTM1-206ENST00000433224 KIAA0232Q92628 1395 aa14.81□□□□□ -0.04
LRRTM1-206ENST00000433224 MCM2P49736 904 aa14.81□□□□□ -0.04
LRRTM1-206ENST00000433224 MAP3K4Q9Y6R4 1608 aa14.81□□□□□ -0.04
LRRTM1-206ENST00000433224 FAM98CQ17RN3 349 aaKnown RBP14.81□□□□□ -0.04
LRRTM1-206ENST00000433224 SLC52A2Q9HAB3 445 aa14.81□□□□□ -0.04
LRRTM1-206ENST00000433224 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
LRRTM1-206ENST00000433224 CEP152O94986 1710 aa14.81□□□□□ -0.04
LRRTM1-206ENST00000433224 TFCP2Q12800 502 aa14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 EDC3Q96F86 508 aaKnown RBP14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 SDF4Q9BRK5 362 aa14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 USP44Q9H0E7 712 aa14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 ARHGAP31Q2M1Z3 1444 aa14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 TRIM34Q9BYJ4 488 aa14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 CWC22Q9HCG8 908 aaKnown RBP14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 GOLGA6L19H0YKK7 550 aa14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 HCLS1P14317 486 aaPredicted RBP14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 ANKIB1Q9P2G1 1089 aa14.8□□□□□ -0.04
LRRTM1-206ENST00000433224 GIGYF1O75420 1035 aaPredicted RBP14.79□□□□□ -0.04
LRRTM1-206ENST00000433224 DZIP3Q86Y13 1208 aaKnown RBP14.79□□□□□ -0.04
LRRTM1-206ENST00000433224 SUCLG2Q96I99 432 aa14.79□□□□□ -0.04
LRRTM1-206ENST00000433224 GNL3LQ9NVN8 582 aaKnown RBP14.79□□□□□ -0.04
LRRTM1-206ENST00000433224 ARAP3Q8WWN8 1544 aa14.79□□□□□ -0.04
LRRTM1-206ENST00000433224 ALDH1L1O75891 902 aa14.79□□□□□ -0.04
LRRTM1-206ENST00000433224 CHST3Q7LGC8 479 aa14.79□□□□□ -0.04
LRRTM1-206ENST00000433224 CCDC144CPQ8IYA2 1237 aa14.79□□□□□ -0.04
LRRTM1-206ENST00000433224 ESYT1Q9BSJ8 1104 aa14.79□□□□□ -0.04
LRRTM1-206ENST00000433224 INSRP06213 1382 aa14.78□□□□□ -0.04
LRRTM1-206ENST00000433224 SOS1Q07889 1333 aaPredicted RBP14.78□□□□□ -0.04
LRRTM1-206ENST00000433224 TTLL7Q6ZT98 887 aa14.78□□□□□ -0.04
LRRTM1-206ENST00000433224 EVI5LQ96CN4 794 aa14.78□□□□□ -0.04
LRRTM1-206ENST00000433224 TFIP11Q9UBB9 837 aaKnown RBP14.78□□□□□ -0.04
LRRTM1-206ENST00000433224 ZNF652Q9Y2D9 606 aa14.78□□□□□ -0.04
LRRTM1-206ENST00000433224 CCDC73Q6ZRK6 1079 aa14.77□□□□□ -0.04
LRRTM1-206ENST00000433224 SYNMO15061 1565 aa14.77□□□□□ -0.04
LRRTM1-206ENST00000433224 NPHP4O75161 1426 aaPredicted RBP14.77□□□□□ -0.04
LRRTM1-206ENST00000433224 AKAP2Q9Y2D5 859 aa14.77□□□□□ -0.04
LRRTM1-206ENST00000433224 SPHKAPQ2M3C7 1700 aa14.77□□□□□ -0.05
LRRTM1-206ENST00000433224 PHKG2P15735 406 aa14.77□□□□□ -0.05
LRRTM1-206ENST00000433224 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
LRRTM1-206ENST00000433224 ZGPATQ8N5A5 531 aaKnown RBP14.77□□□□□ -0.05
LRRTM1-206ENST00000433224 ZMYND15Q9H091 742 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms