RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 CACNA1FO60840 1977 aa23.98■■□□□ 1.43
DDR1-236ENST00000431373 RGL2O15211 777 aa23.98■■□□□ 1.43
DDR1-236ENST00000431373 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
DDR1-236ENST00000431373 NFIXQ14938 502 aa23.98■■□□□ 1.43
DDR1-236ENST00000431373 CCDC30Q5VVM6 783 aa23.98■■□□□ 1.43
DDR1-236ENST00000431373 MAP3K15Q6ZN16 1313 aa23.98■■□□□ 1.43
DDR1-236ENST00000431373 DDR1Q08345 913 aa23.97■■□□□ 1.43
DDR1-236ENST00000431373 SLFN5Q08AF3 891 aa23.97■■□□□ 1.43
DDR1-236ENST00000431373 TBC1D9BQ66K14 1250 aa23.97■■□□□ 1.43
DDR1-236ENST00000431373 CLEC4GQ6UXB4 293 aa23.97■■□□□ 1.43
DDR1-236ENST00000431373 KLHL34Q8N239 644 aa23.97■■□□□ 1.43
DDR1-236ENST00000431373 KIF13BQ9NQT8 1826 aa23.97■■□□□ 1.43
DDR1-236ENST00000431373 HYPKQ9NX55 129 aa23.97■■□□□ 1.43
DDR1-236ENST00000431373 NRXN2Q9P2S2 1712 aa23.97■■□□□ 1.43
DDR1-236ENST00000431373 ERVV-1B6SEH8 477 aa23.96■■□□□ 1.43
DDR1-236ENST00000431373 POLRMTO00411 1230 aaKnown RBP23.96■■□□□ 1.43
DDR1-236ENST00000431373 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
DDR1-236ENST00000431373 COPS6Q7L5N1 327 aa23.95■■□□□ 1.42
DDR1-236ENST00000431373 XAGE3Q8WTP9 111 aa23.95■■□□□ 1.42
DDR1-236ENST00000431373 ANKRD36CQ5JPF3 1778 aa23.94■■□□□ 1.42
DDR1-236ENST00000431373 AIMP1Q12904 312 aaKnown RBP23.94■■□□□ 1.42
DDR1-236ENST00000431373 HLFQ16534 295 aa23.94■■□□□ 1.42
DDR1-236ENST00000431373 CDCA7LQ96GN5 454 aa23.94■■□□□ 1.42
DDR1-236ENST00000431373 SYT17Q9BSW7 474 aa23.94■■□□□ 1.42
DDR1-236ENST00000431373 ZBTB3Q9H5J0 574 aa23.94■■□□□ 1.42
DDR1-236ENST00000431373 SETDB2Q96T68 719 aa23.93■■□□□ 1.42
DDR1-236ENST00000431373 STK31Q9BXU1 1019 aa23.93■■□□□ 1.42
DDR1-236ENST00000431373 CD2APQ9Y5K6 639 aa23.93■■□□□ 1.42
DDR1-236ENST00000431373 CARMIL3Q8ND23 1372 aa23.92■■□□□ 1.42
DDR1-236ENST00000431373 VAMP4O75379 141 aa23.92■■□□□ 1.42
DDR1-236ENST00000431373 C10orf71Q711Q0 1435 aa23.92■■□□□ 1.42
DDR1-236ENST00000431373 ARFGEF2Q9Y6D5 1785 aa23.91■■□□□ 1.42
DDR1-236ENST00000431373 SERPINB2P05120 415 aa23.91■■□□□ 1.42
DDR1-236ENST00000431373 ATP10DQ9P241 1426 aa23.91■■□□□ 1.42
DDR1-236ENST00000431373 GIGYF2Q6Y7W6 1299 aaKnown RBP23.9■■□□□ 1.42
DDR1-236ENST00000431373 TRMT2AQ8IZ69 625 aaKnown RBP23.9■■□□□ 1.42
DDR1-236ENST00000431373 TCERG1O14776 1098 aaKnown RBP23.89■■□□□ 1.41
DDR1-236ENST00000431373 PHAXQ9H814 394 aaKnown RBP23.89■■□□□ 1.41
DDR1-236ENST00000431373 NIP7Q9Y221 180 aaKnown RBP eCLIP23.89■■□□□ 1.41
DDR1-236ENST00000431373 KIAA1551Q9HCM1 1747 aa23.88■■□□□ 1.41
DDR1-236ENST00000431373 ANKRD13DQ6ZTN6 518 aa23.87■■□□□ 1.41
DDR1-236ENST00000431373 NLGN2Q8NFZ4 835 aa23.87■■□□□ 1.41
DDR1-236ENST00000431373 PLBD2Q8NHP8 589 aa23.87■■□□□ 1.41
DDR1-236ENST00000431373 N4BP2Q86UW6 1770 aaPredicted RBP23.87■■□□□ 1.41
DDR1-236ENST00000431373 SLC4A2P04920 1241 aa23.86■■□□□ 1.41
DDR1-236ENST00000431373 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
DDR1-236ENST00000431373 ANKRD31Q8N7Z5 1873 aa23.85■■□□□ 1.41
DDR1-236ENST00000431373 HSP90AB3PQ58FF7 597 aa23.85■■□□□ 1.41
DDR1-236ENST00000431373 NPHP1O15259 732 aa23.84■■□□□ 1.41
DDR1-236ENST00000431373 GPTP24298 496 aa23.84■■□□□ 1.41
DDR1-236ENST00000431373 NBPF5PQ86XG9 351 aaPredicted RBP23.84■■□□□ 1.41
DDR1-236ENST00000431373 ZNF34Q8IZ26 560 aa23.84■■□□□ 1.41
DDR1-236ENST00000431373 CNBD1Q8NA66 436 aa23.84■■□□□ 1.41
DDR1-236ENST00000431373 DDX58O95786 925 aaKnown RBP23.83■■□□□ 1.41
DDR1-236ENST00000431373 TGFB2P61812 414 aa23.83■■□□□ 1.41
DDR1-236ENST00000431373 PRR5LQ6MZQ0 368 aa23.83■■□□□ 1.41
DDR1-236ENST00000431373 UBN2Q6ZU65 1347 aa23.83■■□□□ 1.4
DDR1-236ENST00000431373 PXDNLA1KZ92 1463 aa23.82■■□□□ 1.4
DDR1-236ENST00000431373 TCIRG1Q13488 830 aa23.82■■□□□ 1.4
DDR1-236ENST00000431373 RIC3Q7Z5B4 369 aa23.82■■□□□ 1.4
DDR1-236ENST00000431373 FAM177BA6PVY3 158 aa23.81■■□□□ 1.4
DDR1-236ENST00000431373 ST5P78524 1137 aa23.81■■□□□ 1.4
DDR1-236ENST00000431373 PARP10Q53GL7 1025 aa23.81■■□□□ 1.4
DDR1-236ENST00000431373 TPTE2Q6XPS3 522 aa23.81■■□□□ 1.4
DDR1-236ENST00000431373 G2E3Q7L622 706 aa23.81■■□□□ 1.4
DDR1-236ENST00000431373 BRCA1P38398 1863 aaKnown RBP23.81■■□□□ 1.4
DDR1-236ENST00000431373 IBTKQ9P2D0 1353 aaPredicted RBP23.8■■□□□ 1.4
DDR1-236ENST00000431373 FLIIQ13045 1269 aa23.8■■□□□ 1.4
DDR1-236ENST00000431373 NYXQ9GZU5 481 aa23.8■■□□□ 1.4
DDR1-236ENST00000431373 DLEC1Q9Y238 1755 aa23.8■■□□□ 1.4
DDR1-236ENST00000431373 CT47B1P0C2W7 299 aaPredicted RBP23.79■■□□□ 1.4
DDR1-236ENST00000431373 PPP1R42Q7Z4L9 355 aa23.79■■□□□ 1.4
DDR1-236ENST00000431373 CCDC24Q8N4L8 307 aa23.79■■□□□ 1.4
DDR1-236ENST00000431373 ZNF428Q96B54 188 aa23.79■■□□□ 1.4
DDR1-236ENST00000431373 SUSD4Q5VX71 490 aa23.78■■□□□ 1.4
DDR1-236ENST00000431373 KSR2Q6VAB6 950 aa23.78■■□□□ 1.4
DDR1-236ENST00000431373 BRIP1Q9BX63 1249 aa23.78■■□□□ 1.4
DDR1-236ENST00000431373 A0A0G2JLW4 131 aa23.77■■□□□ 1.4
DDR1-236ENST00000431373 DPEP1P16444 411 aa23.77■■□□□ 1.4
DDR1-236ENST00000431373 GTF2E1P29083 439 aaPredicted RBP23.77■■□□□ 1.4
DDR1-236ENST00000431373 NLRP10Q86W26 655 aa23.77■■□□□ 1.4
DDR1-236ENST00000431373 ISCA1Q9BUE6 129 aa23.77■■□□□ 1.4
DDR1-236ENST00000431373 ADCY9O60503 1353 aa23.77■■□□□ 1.4
DDR1-236ENST00000431373 COL11A2P13942 1736 aaPredicted RBP23.76■■□□□ 1.39
DDR1-236ENST00000431373 PI4KAP2A4QPH2 592 aa23.76■■□□□ 1.39
DDR1-236ENST00000431373 DCAF8L1A6NGE4 600 aa23.76■■□□□ 1.39
DDR1-236ENST00000431373 NTSR2O95665 410 aa23.76■■□□□ 1.39
DDR1-236ENST00000431373 FKBP5Q13451 457 aaPredicted RBP23.76■■□□□ 1.39
DDR1-236ENST00000431373 PI4KAP1Q8N8J0 262 aa23.76■■□□□ 1.39
DDR1-236ENST00000431373 MAP3K2Q9Y2U5 619 aa23.76■■□□□ 1.39
DDR1-236ENST00000431373 ATP5J2-PTCD1G3V325 749 aa23.75■■□□□ 1.39
DDR1-236ENST00000431373 PDE6BP35913 854 aa23.75■■□□□ 1.39
DDR1-236ENST00000431373 MYD88Q99836 296 aa23.75■■□□□ 1.39
DDR1-236ENST00000431373 METTL22Q9BUU2 404 aaPredicted RBP23.75■■□□□ 1.39
DDR1-236ENST00000431373 UTP14AQ9BVJ6 771 aaKnown RBP23.75■■□□□ 1.39
DDR1-236ENST00000431373 CHRNA5P30532 468 aa23.74■■□□□ 1.39
DDR1-236ENST00000431373 TRIM28Q13263 835 aaKnown RBP23.74■■□□□ 1.39
DDR1-236ENST00000431373 ALDH1L2Q3SY69 923 aa23.74■■□□□ 1.39
DDR1-236ENST00000431373 NUTM1Q86Y26 1132 aa23.74■■□□□ 1.39
DDR1-236ENST00000431373 SSH1Q8WYL5 1049 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms