RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 CFAP70Q5T0N1 1121 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 TMEM132EQ6IEE7 984 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 VPS36Q86VN1 386 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 MICALL1Q8N3F8 863 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 CNNM3Q8NE01 707 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 SLC12A5Q9H2X9 1139 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 NSD3Q9BZ95 1437 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 IGHDP01880 384 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 MYRIPQ8NFW9 859 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 TTC12Q9H892 705 aaPredicted RBP7.14□□□□□ -1.27
CHD8-202ENST00000430710 MCM6Q14566 821 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 EXOC6BQ9Y2D4 811 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 NUCB1Q02818 461 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 KANK3Q6NY19 840 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 CCDC186Q7Z3E2 898 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 ACSBG1Q96GR2 724 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 IL1RAPL2Q9NP60 686 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 PCF11O94913 1555 aaKnown RBP7.14□□□□□ -1.27
CHD8-202ENST00000430710 ANO6Q4KMQ2 910 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 ZNF622Q969S3 477 aaKnown RBP eCLIP7.14□□□□□ -1.276e-7■■■□□ 15.3
CHD8-202ENST00000430710 INSRP06213 1382 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 CETN2P41208 172 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 TDO2P48775 406 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 ANAPC15P60006 121 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 HLTFQ14527 1009 aaKnown RBP eCLIP7.14□□□□□ -1.27
CHD8-202ENST00000430710 PRPF40BQ6NWY9 871 aaKnown RBP7.14□□□□□ -1.27
CHD8-202ENST00000430710 SPATA24Q86W54 205 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 C10orf67Q8IYJ2 551 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 OTUD6BQ8N6M0 293 aa7.14□□□□□ -1.27
CHD8-202ENST00000430710 MYCP01106 439 aaPredicted RBP7.13□□□□□ -1.27
CHD8-202ENST00000430710 KLHL10Q6JEL2 608 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 CACNA2D4Q7Z3S7 1137 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 NBPF11Q86T75 865 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 IL16Q14005 1332 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 TRIM27P14373 513 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 DNAI1Q9UI46 699 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 IKQ13123 557 aaPredicted RBP7.13□□□□□ -1.27
CHD8-202ENST00000430710 TTC22Q5TAA0 569 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 KIF6Q6ZMV9 814 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 AIDAQ96BJ3 306 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 TMX3Q96JJ7 454 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 ZNF692Q9BU19 519 aaPredicted RBP7.13□□□□□ -1.27
CHD8-202ENST00000430710 CCDC141Q6ZP82 1450 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 UBASH3AP57075 661 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 CCDC178Q5BJE1 867 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 SULT6B1Q6IMI4 303 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 TROQ12816 1431 aaPredicted RBP7.13□□□□□ -1.27
CHD8-202ENST00000430710 PTPRCP08575 1304 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 CTAGE15A4D2H0 777 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 CTAGE8P0CG41 777 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 WDR78Q5VTH9 848 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 GBP6Q6ZN66 633 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 CTAGE6Q86UF2 777 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 CTAGE4Q8IX94 777 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 ANKS4BQ8N8V4 417 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 TMEM87AQ8NBN3 555 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 PYM1Q9BRP8 204 aaKnown RBP7.13□□□□□ -1.27
CHD8-202ENST00000430710 NSRP1Q9H0G5 558 aaKnown RBP7.13□□□□□ -1.27
CHD8-202ENST00000430710 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHD8-202ENST00000430710 CCDC196A0A1B0GTZ2 297 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 EP400NLQ6ZTU2 488 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 SIL1Q9H173 461 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 GOPCQ9HD26 462 aa7.13□□□□□ -1.27
CHD8-202ENST00000430710 CTAGE9A4FU28 777 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 NUP133Q8WUM0 1156 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 ARHGAP45Q92619 1136 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 ERO1AQ96HE7 468 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 NSD2O96028 1365 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 RPRD2Q5VT52 1461 aaKnown RBP7.12□□□□□ -1.27
CHD8-202ENST00000430710 MAATS1Q7Z4T9 603 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 ZFP91Q96JP5 570 aaPredicted RBP7.12□□□□□ -1.27
CHD8-202ENST00000430710 UBAC1Q9BSL1 405 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 GNL3LQ9NVN8 582 aaKnown RBP7.12□□□□□ -1.27
CHD8-202ENST00000430710 SMARCA5O60264 1052 aaPredicted RBP7.12□□□□□ -1.27
CHD8-202ENST00000430710 TSG101Q99816 390 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 EAPPQ56P03 285 aaPredicted RBP7.12□□□□□ -1.27
CHD8-202ENST00000430710 SOGA3Q5TF21 947 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 SEPT11Q9NVA2 429 aaKnown RBP7.12□□□□□ -1.27
CHD8-202ENST00000430710 PPP1R12BO60237 982 aaPredicted RBP7.12□□□□□ -1.27
CHD8-202ENST00000430710 TATP17735 454 aaPredicted RBP7.12□□□□□ -1.27
CHD8-202ENST00000430710 C6orf163Q5TEZ5 329 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 DNAJC5Q9H3Z4 198 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 TFIP11Q9UBB9 837 aaKnown RBP7.12□□□□□ -1.27
CHD8-202ENST00000430710 MSL1Q68DK7 614 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 NUTM1Q86Y26 1132 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 CTAGE1Q96RT6 745 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 TMX1Q9H3N1 280 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 ZHX3Q9H4I2 956 aa7.12□□□□□ -1.27
CHD8-202ENST00000430710 KRBA2Q6ZNG9 492 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 HDXQ7Z353 690 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 HMG20BQ9P0W2 317 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 VPS18Q9P253 973 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 JADE2Q9NQC1 790 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 CNNM1Q9NRU3 951 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.11□□□□□ -1.277e-7■■■■□ 19.7
CHD8-202ENST00000430710 WDHD1O75717 1129 aaPredicted RBP7.11□□□□□ -1.27
CHD8-202ENST00000430710 CTCFLQ8NI51 663 aaPredicted RBP7.11□□□□□ -1.27
CHD8-202ENST00000430710 CPSF2Q9P2I0 782 aaKnown RBP7.11□□□□□ -1.27
CHD8-202ENST00000430710 PRG4Q92954 1404 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms