RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 VAMP4O75379 141 aa25.88■■□□□ 1.73
CSNK1E-207ENST00000430335 HYPKQ9NX55 129 aa25.88■■□□□ 1.73
CSNK1E-207ENST00000430335 MAP3K15Q6ZN16 1313 aa25.88■■□□□ 1.73
CSNK1E-207ENST00000430335 KIF6Q6ZMV9 814 aa25.87■■□□□ 1.73
CSNK1E-207ENST00000430335 TTLL7Q6ZT98 887 aa25.87■■□□□ 1.73
CSNK1E-207ENST00000430335 ZNF652Q9Y2D9 606 aa25.87■■□□□ 1.73
CSNK1E-207ENST00000430335 BCORQ6W2J9 1755 aa25.85■■□□□ 1.73
CSNK1E-207ENST00000430335 NFIXQ14938 502 aa25.85■■□□□ 1.73
CSNK1E-207ENST00000430335 COPS6Q7L5N1 327 aa25.85■■□□□ 1.73
CSNK1E-207ENST00000430335 XAGE3Q8WTP9 111 aa25.85■■□□□ 1.73
CSNK1E-207ENST00000430335 PARP3Q9Y6F1 533 aa25.85■■□□□ 1.73
CSNK1E-207ENST00000430335 ZBED9Q6R2W3 1325 aa25.85■■□□□ 1.73
CSNK1E-207ENST00000430335 POLRMTO00411 1230 aaKnown RBP25.83■■□□□ 1.73
CSNK1E-207ENST00000430335 DDR1Q08345 913 aa25.83■■□□□ 1.73
CSNK1E-207ENST00000430335 TBC1D9BQ66K14 1250 aa25.83■■□□□ 1.73
CSNK1E-207ENST00000430335 STK31Q9BXU1 1019 aa25.83■■□□□ 1.73
CSNK1E-207ENST00000430335 HLFQ16534 295 aa25.82■■□□□ 1.72
CSNK1E-207ENST00000430335 AIMP1Q12904 312 aaKnown RBP25.81■■□□□ 1.72
CSNK1E-207ENST00000430335 ZBTB3Q9H5J0 574 aa25.81■■□□□ 1.72
CSNK1E-207ENST00000430335 GIGYF2Q6Y7W6 1299 aaKnown RBP25.8■■□□□ 1.72
CSNK1E-207ENST00000430335 BICDL1Q6ZP65 573 aa25.79■■□□□ 1.72
CSNK1E-207ENST00000430335 SETDB2Q96T68 719 aa25.79■■□□□ 1.72
CSNK1E-207ENST00000430335 FHDC1Q9C0D6 1143 aaPredicted RBP25.79■■□□□ 1.72
CSNK1E-207ENST00000430335 PHAXQ9H814 394 aaKnown RBP25.79■■□□□ 1.72
CSNK1E-207ENST00000430335 CARMIL3Q8ND23 1372 aa25.79■■□□□ 1.72
CSNK1E-207ENST00000430335 ATP10DQ9P241 1426 aa25.79■■□□□ 1.72
CSNK1E-207ENST00000430335 SLC4A2P04920 1241 aa25.78■■□□□ 1.72
CSNK1E-207ENST00000430335 PLBD2Q8NHP8 589 aa25.78■■□□□ 1.72
CSNK1E-207ENST00000430335 CD2APQ9Y5K6 639 aa25.78■■□□□ 1.72
CSNK1E-207ENST00000430335 TCERG1O14776 1098 aaKnown RBP25.77■■□□□ 1.72
CSNK1E-207ENST00000430335 SERPINB2P05120 415 aa25.77■■□□□ 1.72
CSNK1E-207ENST00000430335 CT47B1P0C2W7 299 aaPredicted RBP25.77■■□□□ 1.72
CSNK1E-207ENST00000430335 ANKRD13DQ6ZTN6 518 aa25.77■■□□□ 1.72
CSNK1E-207ENST00000430335 ZNF428Q96B54 188 aa25.77■■□□□ 1.72
CSNK1E-207ENST00000430335 HSP90AB3PQ58FF7 597 aa25.76■■□□□ 1.71
CSNK1E-207ENST00000430335 SYT17Q9BSW7 474 aa25.76■■□□□ 1.71
CSNK1E-207ENST00000430335 NIP7Q9Y221 180 aaKnown RBP eCLIP25.76■■□□□ 1.71
CSNK1E-207ENST00000430335 C10orf71Q711Q0 1435 aa25.75■■□□□ 1.71
CSNK1E-207ENST00000430335 ZNF34Q8IZ26 560 aa25.74■■□□□ 1.71
CSNK1E-207ENST00000430335 DDX58O95786 925 aaKnown RBP25.73■■□□□ 1.71
CSNK1E-207ENST00000430335 NRXN2Q9P2S2 1712 aa25.73■■□□□ 1.71
CSNK1E-207ENST00000430335 NUP98P52948 1817 aa25.72■■□□□ 1.71
CSNK1E-207ENST00000430335 TCIRG1Q13488 830 aa25.72■■□□□ 1.71
CSNK1E-207ENST00000430335 G2E3Q7L622 706 aa25.72■■□□□ 1.71
CSNK1E-207ENST00000430335 KLHL34Q8N239 644 aa25.72■■□□□ 1.71
CSNK1E-207ENST00000430335 FLIIQ13045 1269 aa25.71■■□□□ 1.71
CSNK1E-207ENST00000430335 PARP10Q53GL7 1025 aa25.71■■□□□ 1.71
CSNK1E-207ENST00000430335 UBN2Q6ZU65 1347 aa25.7■■□□□ 1.71
CSNK1E-207ENST00000430335 CACNA1FO60840 1977 aa25.7■■□□□ 1.7
CSNK1E-207ENST00000430335 PRR5LQ6MZQ0 368 aa25.7■■□□□ 1.7
CSNK1E-207ENST00000430335 RIC3Q7Z5B4 369 aa25.7■■□□□ 1.7
CSNK1E-207ENST00000430335 IBTKQ9P2D0 1353 aaPredicted RBP25.69■■□□□ 1.7
CSNK1E-207ENST00000430335 GPTP24298 496 aa25.69■■□□□ 1.7
CSNK1E-207ENST00000430335 TGFB2P61812 414 aa25.69■■□□□ 1.7
CSNK1E-207ENST00000430335 ALDH1L2Q3SY69 923 aa25.69■■□□□ 1.7
CSNK1E-207ENST00000430335 KSR2Q6VAB6 950 aa25.69■■□□□ 1.7
CSNK1E-207ENST00000430335 TPTE2Q6XPS3 522 aa25.69■■□□□ 1.7
CSNK1E-207ENST00000430335 NBPF5PQ86XG9 351 aaPredicted RBP25.69■■□□□ 1.7
CSNK1E-207ENST00000430335 CNBD1Q8NA66 436 aa25.69■■□□□ 1.7
CSNK1E-207ENST00000430335 AFDNP55196 1824 aaKnown RBP25.68■■□□□ 1.7
CSNK1E-207ENST00000430335 KIF13BQ9NQT8 1826 aa25.68■■□□□ 1.7
CSNK1E-207ENST00000430335 NYXQ9GZU5 481 aa25.68■■□□□ 1.7
CSNK1E-207ENST00000430335 PI4KAP2A4QPH2 592 aa25.67■■□□□ 1.7
CSNK1E-207ENST00000430335 PI4KAP1Q8N8J0 262 aa25.67■■□□□ 1.7
CSNK1E-207ENST00000430335 NLGN2Q8NFZ4 835 aa25.67■■□□□ 1.7
CSNK1E-207ENST00000430335 SSH1Q8WYL5 1049 aa25.67■■□□□ 1.7
CSNK1E-207ENST00000430335 ISCA1Q9BUE6 129 aa25.67■■□□□ 1.7
CSNK1E-207ENST00000430335 ST5P78524 1137 aa25.66■■□□□ 1.7
CSNK1E-207ENST00000430335 TRIM28Q13263 835 aaKnown RBP25.66■■□□□ 1.7
CSNK1E-207ENST00000430335 SUSD4Q5VX71 490 aa25.66■■□□□ 1.7
CSNK1E-207ENST00000430335 PPP1R42Q7Z4L9 355 aa25.66■■□□□ 1.7
CSNK1E-207ENST00000430335 NLRP10Q86W26 655 aa25.66■■□□□ 1.7
CSNK1E-207ENST00000430335 MRPL50Q8N5N7 158 aaKnown RBP25.66■■□□□ 1.7
CSNK1E-207ENST00000430335 METTL22Q9BUU2 404 aaPredicted RBP25.66■■□□□ 1.7
CSNK1E-207ENST00000430335 ADCY9O60503 1353 aa25.66■■□□□ 1.7
CSNK1E-207ENST00000430335 FKBP5Q13451 457 aaPredicted RBP25.65■■□□□ 1.7
CSNK1E-207ENST00000430335 BRIP1Q9BX63 1249 aa25.65■■□□□ 1.7
CSNK1E-207ENST00000430335 MAP3K2Q9Y2U5 619 aa25.65■■□□□ 1.7
CSNK1E-207ENST00000430335 NPHP1O15259 732 aa25.64■■□□□ 1.7
CSNK1E-207ENST00000430335 NTSR2O95665 410 aa25.64■■□□□ 1.7
CSNK1E-207ENST00000430335 ARFGEF2Q9Y6D5 1785 aa25.64■■□□□ 1.69
CSNK1E-207ENST00000430335 RNF123Q5XPI4 1314 aa25.63■■□□□ 1.69
CSNK1E-207ENST00000430335 FAM177BA6PVY3 158 aa25.63■■□□□ 1.69
CSNK1E-207ENST00000430335 UTP14AQ9BVJ6 771 aaKnown RBP25.63■■□□□ 1.69
CSNK1E-207ENST00000430335 PXDNLA1KZ92 1463 aa25.63■■□□□ 1.69
CSNK1E-207ENST00000430335 ANKRD36CQ5JPF3 1778 aa25.63■■□□□ 1.69
CSNK1E-207ENST00000430335 BRPF1P55201 1214 aaPredicted RBP25.62■■□□□ 1.69
CSNK1E-207ENST00000430335 MYD88Q99836 296 aa25.62■■□□□ 1.69
CSNK1E-207ENST00000430335 PDZRN3Q9UPQ7 1066 aa25.62■■□□□ 1.69
CSNK1E-207ENST00000430335 ATP5J2-PTCD1G3V325 749 aa25.61■■□□□ 1.69
CSNK1E-207ENST00000430335 GTF2E1P29083 439 aaPredicted RBP25.61■■□□□ 1.69
CSNK1E-207ENST00000430335 PDE6BP35913 854 aa25.61■■□□□ 1.69
CSNK1E-207ENST00000430335 RARSP54136 660 aaKnown RBP25.61■■□□□ 1.69
CSNK1E-207ENST00000430335 DNAAF4Q8WXU2 420 aa25.61■■□□□ 1.69
CSNK1E-207ENST00000430335 SMC4Q9NTJ3 1288 aa25.61■■□□□ 1.69
CSNK1E-207ENST00000430335 CCDC24Q8N4L8 307 aa25.6■■□□□ 1.69
CSNK1E-207ENST00000430335 CCDC191Q8NCU4 936 aa25.6■■□□□ 1.69
CSNK1E-207ENST00000430335 BCL2L13Q9BXK5 485 aa25.6■■□□□ 1.69
CSNK1E-207ENST00000430335 DPEP1P16444 411 aa25.59■■□□□ 1.69
CSNK1E-207ENST00000430335 NEXNQ0ZGT2 675 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms