RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 EP400Q96L91 3159 aa11.35□□□□□ -0.59
COL6A4P2-201ENST00000430317 MYH14Q7Z406 1995 aaKnown RBP11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 SCN7AQ01118 1682 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 NBPF26B4DH59 902 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 ERVV-1B6SEH8 477 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 TCERG1O14776 1098 aaKnown RBP11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 BCAR3O75815 825 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 RRP1P56182 461 aaKnown RBP11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 POLA2Q14181 598 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 NBPF10Q6P3W6 841 aaKnown RBP11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 DEFB132Q7Z7B7 95 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 DZIP3Q86Y13 1208 aaKnown RBP11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 NBPF15Q8N660 670 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 PLBD2Q8NHP8 589 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 XAGE3Q8WTP9 111 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 CHMP4BQ9H444 224 aaKnown RBP11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 TFCP2L1Q9NZI6 479 aa11.34□□□□□ -0.59
COL6A4P2-201ENST00000430317 BCORQ6W2J9 1755 aa11.33□□□□□ -0.59
COL6A4P2-201ENST00000430317 NEFLP07196 543 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 RFC4P35249 363 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 KCNQ4P56696 695 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 PDE3AQ14432 1141 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 PROSER3Q2NL68 480 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 TRAPPC3LQ5T215 181 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 KSR2Q6VAB6 950 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 COPS6Q7L5N1 327 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 LRP10Q7Z4F1 713 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 NOB1Q9ULX3 412 aaKnown RBP11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 N4BP2Q86UW6 1770 aaPredicted RBP11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 ATP10DQ9P241 1426 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 RNF123Q5XPI4 1314 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
COL6A4P2-201ENST00000430317 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 IBTKQ9P2D0 1353 aaPredicted RBP11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 ZPR1O75312 459 aa11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 ANXA1P04083 346 aa11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 CCT4P50991 539 aaKnown RBP11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 SLC15A2Q16348 729 aa11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 SAMD1Q6SPF0 538 aaPredicted RBP11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 CLEC4GQ6UXB4 293 aa11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 ILDR2Q71H61 639 aa11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 DZIP1LQ8IYY4 767 aaKnown RBP11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 DNAAF4Q8WXU2 420 aa11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 PHAXQ9H814 394 aaKnown RBP11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 ABCC4O15439 1325 aa11.32□□□□□ -0.6
COL6A4P2-201ENST00000430317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
COL6A4P2-201ENST00000430317 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
COL6A4P2-201ENST00000430317 TRIM27P14373 513 aa11.31□□□□□ -0.6
COL6A4P2-201ENST00000430317 PIP4K2AP48426 406 aaPredicted RBP11.31□□□□□ -0.6
COL6A4P2-201ENST00000430317 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
COL6A4P2-201ENST00000430317 ARXQ96QS3 562 aa11.31□□□□□ -0.6
COL6A4P2-201ENST00000430317 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
COL6A4P2-201ENST00000430317 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
COL6A4P2-201ENST00000430317 ANKRD36CQ5JPF3 1778 aa11.31□□□□□ -0.6
COL6A4P2-201ENST00000430317 PHF14O94880 888 aa11.3□□□□□ -0.6
COL6A4P2-201ENST00000430317 ZNF827Q17R98 1081 aa11.3□□□□□ -0.6
COL6A4P2-201ENST00000430317 GIGYF2Q6Y7W6 1299 aaKnown RBP11.3□□□□□ -0.6
COL6A4P2-201ENST00000430317 G2E3Q7L622 706 aa11.3□□□□□ -0.6
COL6A4P2-201ENST00000430317 LINS1Q8NG48 757 aa11.3□□□□□ -0.6
COL6A4P2-201ENST00000430317 HDAC5Q9UQL6 1122 aa11.3□□□□□ -0.6
COL6A4P2-201ENST00000430317 MAP3K2Q9Y2U5 619 aa11.3□□□□□ -0.6
COL6A4P2-201ENST00000430317 SUPT16HQ9Y5B9 1047 aaKnown RBP11.3□□□□□ -0.6
COL6A4P2-201ENST00000430317 TUBGCP6Q96RT7 1819 aa11.3□□□□□ -0.6
COL6A4P2-201ENST00000430317 ADCY9O60503 1353 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 PITPNM1O00562 1244 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 ALDH1L1O75891 902 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 CAMTA2O94983 1202 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 AAMPQ13685 434 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 PARP10Q53GL7 1025 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 TTLL7Q6ZT98 887 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 SLC16A10Q8TF71 515 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 SRCIN1Q9C0H9 1055 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
COL6A4P2-201ENST00000430317 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
COL6A4P2-201ENST00000430317 INTS3Q68E01 1043 aaKnown RBP11.28□□□□□ -0.6
COL6A4P2-201ENST00000430317 SLC4A10Q6U841 1118 aa11.28□□□□□ -0.6
COL6A4P2-201ENST00000430317 ANO8Q9HCE9 1232 aaPredicted RBP11.28□□□□□ -0.6
COL6A4P2-201ENST00000430317 DDX19BQ9UMR2 479 aa11.28□□□□□ -0.6
COL6A4P2-201ENST00000430317 TBC1D2BQ9UPU7 963 aa11.28□□□□□ -0.6
COL6A4P2-201ENST00000430317 PNPLA7Q6ZV29 1317 aa11.28□□□□□ -0.6
COL6A4P2-201ENST00000430317 TRIM28Q13263 835 aaKnown RBP11.27□□□□□ -0.61
COL6A4P2-201ENST00000430317 TCIRG1Q13488 830 aa11.27□□□□□ -0.61
COL6A4P2-201ENST00000430317 ITPRIPQ8IWB1 547 aa11.27□□□□□ -0.61
COL6A4P2-201ENST00000430317 NLGN1Q8N2Q7 840 aa11.27□□□□□ -0.61
COL6A4P2-201ENST00000430317 CCDC191Q8NCU4 936 aa11.27□□□□□ -0.61
COL6A4P2-201ENST00000430317 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.61
COL6A4P2-201ENST00000430317 NUP98P52948 1817 aa11.27□□□□□ -0.61
COL6A4P2-201ENST00000430317 CARMIL3Q8ND23 1372 aa11.27□□□□□ -0.61
COL6A4P2-201ENST00000430317 F6X3S4 739 aa11.26□□□□□ -0.61
COL6A4P2-201ENST00000430317 MVPQ14764 893 aaKnown RBP11.26□□□□□ -0.61
COL6A4P2-201ENST00000430317 USPL1Q5W0Q7 1092 aa11.26□□□□□ -0.61
COL6A4P2-201ENST00000430317 MYD88Q99836 296 aa11.26□□□□□ -0.61
COL6A4P2-201ENST00000430317 CWC25Q9NXE8 425 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms