RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 PNPLA7Q6ZV29 1317 aa24.75■■□□□ 1.55
PTCD1-203ENST00000430029 PI4KAP2A4QPH2 592 aa24.74■■□□□ 1.55
PTCD1-203ENST00000430029 F6X3S4 739 aa24.74■■□□□ 1.55
PTCD1-203ENST00000430029 CAMTA2O94983 1202 aa24.74■■□□□ 1.55
PTCD1-203ENST00000430029 TRIM27P14373 513 aa24.74■■□□□ 1.55
PTCD1-203ENST00000430029 ADRA2BP18089 450 aa24.74■■□□□ 1.55
PTCD1-203ENST00000430029 KSR2Q6VAB6 950 aa24.74■■□□□ 1.55
PTCD1-203ENST00000430029 ANKRD13DQ6ZTN6 518 aa24.74■■□□□ 1.55
PTCD1-203ENST00000430029 NPM2Q86SE8 214 aaKnown RBP24.74■■□□□ 1.55
PTCD1-203ENST00000430029 PI4KAP1Q8N8J0 262 aa24.74■■□□□ 1.55
PTCD1-203ENST00000430029 MAP3K15Q6ZN16 1313 aa24.74■■□□□ 1.55
PTCD1-203ENST00000430029 IPO8O15397 1037 aaKnown RBP24.73■■□□□ 1.55
PTCD1-203ENST00000430029 DDX58O95786 925 aaKnown RBP24.73■■□□□ 1.55
PTCD1-203ENST00000430029 ATF7IPQ6VMQ6 1270 aa24.73■■□□□ 1.55
PTCD1-203ENST00000430029 KIF6Q6ZMV9 814 aa24.73■■□□□ 1.55
PTCD1-203ENST00000430029 COL23A1Q86Y22 540 aaPredicted RBP24.73■■□□□ 1.55
PTCD1-203ENST00000430029 PLBD2Q8NHP8 589 aa24.73■■□□□ 1.55
PTCD1-203ENST00000430029 SRP68Q9UHB9 627 aaKnown RBP24.73■■□□□ 1.55
PTCD1-203ENST00000430029 HLFQ16534 295 aa24.72■■□□□ 1.55
PTCD1-203ENST00000430029 RIC3Q7Z5B4 369 aa24.72■■□□□ 1.55
PTCD1-203ENST00000430029 API5Q9BZZ5 524 aaKnown RBP24.72■■□□□ 1.55
PTCD1-203ENST00000430029 NARFQ9UHQ1 456 aa24.72■■□□□ 1.55
PTCD1-203ENST00000430029 MAP3K2Q9Y2U5 619 aa24.72■■□□□ 1.55
PTCD1-203ENST00000430029 QSER1Q2KHR3 1735 aa24.72■■□□□ 1.55
PTCD1-203ENST00000430029 BCL2L12Q9HB09 334 aa24.71■■□□□ 1.55
PTCD1-203ENST00000430029 BCORQ6W2J9 1755 aa24.71■■□□□ 1.55
PTCD1-203ENST00000430029 ARFGEF2Q9Y6D5 1785 aa24.71■■□□□ 1.55
PTCD1-203ENST00000430029 USP42Q9H9J4 1324 aaKnown RBP24.7■■□□□ 1.54
PTCD1-203ENST00000430029 ERVV-1B6SEH8 477 aa24.7■■□□□ 1.54
PTCD1-203ENST00000430029 RFC4P35249 363 aa24.7■■□□□ 1.54
PTCD1-203ENST00000430029 DNAAF4Q8WXU2 420 aa24.7■■□□□ 1.54
PTCD1-203ENST00000430029 CLUAP1Q96AJ1 413 aa24.7■■□□□ 1.54
PTCD1-203ENST00000430029 SCN7AQ01118 1682 aa24.69■■□□□ 1.54
PTCD1-203ENST00000430029 C20orf194Q5TEA3 1177 aa24.69■■□□□ 1.54
PTCD1-203ENST00000430029 USPL1Q5W0Q7 1092 aa24.69■■□□□ 1.54
PTCD1-203ENST00000430029 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.69■■□□□ 1.54
PTCD1-203ENST00000430029 FLAD1Q8NFF5 587 aa24.69■■□□□ 1.54
PTCD1-203ENST00000430029 ABCC4O15439 1325 aa24.68■■□□□ 1.54
PTCD1-203ENST00000430029 RLBP1P12271 317 aa24.68■■□□□ 1.54
PTCD1-203ENST00000430029 GIGYF2Q6Y7W6 1299 aaKnown RBP24.68■■□□□ 1.54
PTCD1-203ENST00000430029 METTL22Q9BUU2 404 aaPredicted RBP24.68■■□□□ 1.54
PTCD1-203ENST00000430029 NUP98P52948 1817 aa24.68■■□□□ 1.54
PTCD1-203ENST00000430029 ZPR1O75312 459 aa24.66■■□□□ 1.54
PTCD1-203ENST00000430029 SLC4A10Q6U841 1118 aa24.66■■□□□ 1.54
PTCD1-203ENST00000430029 DZIP1LQ8IYY4 767 aaKnown RBP24.66■■□□□ 1.54
PTCD1-203ENST00000430029 PANK1Q8TE04 598 aa24.66■■□□□ 1.54
PTCD1-203ENST00000430029 PDGFDQ9GZP0 370 aaPredicted RBP24.66■■□□□ 1.54
PTCD1-203ENST00000430029 GYS1P13807 737 aa24.65■■□□□ 1.54
PTCD1-203ENST00000430029 BEND3Q5T5X7 828 aa24.65■■□□□ 1.54
PTCD1-203ENST00000430029 MYD88Q99836 296 aa24.65■■□□□ 1.54
PTCD1-203ENST00000430029 MSH5O43196 834 aa24.64■■□□□ 1.54
PTCD1-203ENST00000430029 IGKV5-2P06315 115 aa24.64■■□□□ 1.54
PTCD1-203ENST00000430029 TCIRG1Q13488 830 aa24.64■■□□□ 1.54
PTCD1-203ENST00000430029 PXDNLA1KZ92 1463 aa24.64■■□□□ 1.53
PTCD1-203ENST00000430029 RGL2O15211 777 aa24.63■■□□□ 1.53
PTCD1-203ENST00000430029 FKBP8Q14318 412 aa24.63■■□□□ 1.53
PTCD1-203ENST00000430029 PDE3AQ14432 1141 aa24.63■■□□□ 1.53
PTCD1-203ENST00000430029 CLEC4GQ6UXB4 293 aa24.63■■□□□ 1.53
PTCD1-203ENST00000430029 TMEM57Q8N5G2 664 aa24.63■■□□□ 1.53
PTCD1-203ENST00000430029 ISCA1Q9BUE6 129 aa24.63■■□□□ 1.53
PTCD1-203ENST00000430029 ATP10DQ9P241 1426 aa24.62■■□□□ 1.53
PTCD1-203ENST00000430029 ATP5J2-PTCD1G3V325 749 aa24.62■■□□□ 1.53
PTCD1-203ENST00000430029 R3HDM1Q15032 1099 aaKnown RBP24.62■■□□□ 1.53
PTCD1-203ENST00000430029 FTSJ3Q8IY81 847 aaKnown RBP24.62■■□□□ 1.53
PTCD1-203ENST00000430029 ANKRD36CQ5JPF3 1778 aa24.62■■□□□ 1.53
PTCD1-203ENST00000430029 GPTP24298 496 aa24.61■■□□□ 1.53
PTCD1-203ENST00000430029 CWF19L2Q2TBE0 894 aaKnown RBP24.61■■□□□ 1.53
PTCD1-203ENST00000430029 TBC1D9BQ66K14 1250 aa24.61■■□□□ 1.53
PTCD1-203ENST00000430029 INTS3Q68E01 1043 aaKnown RBP24.61■■□□□ 1.53
PTCD1-203ENST00000430029 ZNF34Q8IZ26 560 aa24.61■■□□□ 1.53
PTCD1-203ENST00000430029 LINS1Q8NG48 757 aa24.61■■□□□ 1.53
PTCD1-203ENST00000430029 ZNF652Q9Y2D9 606 aa24.61■■□□□ 1.53
PTCD1-203ENST00000430029 N4BP2Q86UW6 1770 aaPredicted RBP24.61■■□□□ 1.53
PTCD1-203ENST00000430029 MS4A1P11836 297 aa24.6■■□□□ 1.53
PTCD1-203ENST00000430029 HSP90AB3PQ58FF7 597 aa24.6■■□□□ 1.53
PTCD1-203ENST00000430029 UBN2Q6ZU65 1347 aa24.6■■□□□ 1.53
PTCD1-203ENST00000430029 NEURL1BA8MQ27 555 aa24.59■■□□□ 1.53
PTCD1-203ENST00000430029 CCT4P50991 539 aaKnown RBP24.59■■□□□ 1.53
PTCD1-203ENST00000430029 NEXNQ0ZGT2 675 aa24.59■■□□□ 1.53
PTCD1-203ENST00000430029 SRCIN1Q9C0H9 1055 aa24.59■■□□□ 1.53
PTCD1-203ENST00000430029 COG6Q9Y2V7 657 aa24.59■■□□□ 1.53
PTCD1-203ENST00000430029 CASZ1Q86V15 1759 aa24.59■■□□□ 1.53
PTCD1-203ENST00000430029 PSDA5PKW4 1024 aaPredicted RBP24.58■■□□□ 1.53
PTCD1-203ENST00000430029 TRIM28Q13263 835 aaKnown RBP24.58■■□□□ 1.53
PTCD1-203ENST00000430029 NIP7Q9Y221 180 aaKnown RBP eCLIP24.58■■□□□ 1.53
PTCD1-203ENST00000430029 NFIXQ14938 502 aa24.57■■□□□ 1.52
PTCD1-203ENST00000430029 BICDL1Q6ZP65 573 aa24.57■■□□□ 1.52
PTCD1-203ENST00000430029 NLRP10Q86W26 655 aa24.57■■□□□ 1.52
PTCD1-203ENST00000430029 AFDNP55196 1824 aaKnown RBP24.56■■□□□ 1.52
PTCD1-203ENST00000430029 ALDH1L1O75891 902 aa24.56■■□□□ 1.52
PTCD1-203ENST00000430029 IRX6P78412 446 aaPredicted RBP24.56■■□□□ 1.52
PTCD1-203ENST00000430029 MSL1Q68DK7 614 aa24.56■■□□□ 1.52
PTCD1-203ENST00000430029 TM4SF1P30408 202 aa24.55■■□□□ 1.52
PTCD1-203ENST00000430029 MVPQ14764 893 aaKnown RBP24.55■■□□□ 1.52
PTCD1-203ENST00000430029 ITPRIPQ8IWB1 547 aa24.55■■□□□ 1.52
PTCD1-203ENST00000430029 NLGN1Q8N2Q7 840 aa24.55■■□□□ 1.52
PTCD1-203ENST00000430029 CCDC191Q8NCU4 936 aa24.55■■□□□ 1.52
PTCD1-203ENST00000430029 GCKRQ14397 625 aa24.54■■□□□ 1.52
PTCD1-203ENST00000430029 SUSD4Q5VX71 490 aa24.54■■□□□ 1.52
PTCD1-203ENST00000430029 CRBNQ96SW2 442 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms