RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 API5Q9BZZ5 524 aaKnown RBP10.85□□□□□ -0.67
NUP98-207ENST00000429801 PRAMEF22A3QJZ6 481 aa10.84□□□□□ -0.67
NUP98-207ENST00000429801 TRIM27P14373 513 aa10.84□□□□□ -0.67
NUP98-207ENST00000429801 C20orf194Q5TEA3 1177 aa10.84□□□□□ -0.67
NUP98-207ENST00000429801 DZIP1LQ8IYY4 767 aaKnown RBP10.84□□□□□ -0.67
NUP98-207ENST00000429801 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
NUP98-207ENST00000429801 RGS17Q9UGC6 210 aaPredicted RBP10.84□□□□□ -0.67
NUP98-207ENST00000429801 KAT6BQ8WYB5 2073 aa10.84□□□□□ -0.67
NUP98-207ENST00000429801 CHPF2Q9P2E5 772 aa10.84□□□□□ -0.67
NUP98-207ENST00000429801 KCNQ2O43526 872 aa10.83□□□□□ -0.68
NUP98-207ENST00000429801 ZSCAN20P17040 1043 aaPredicted RBP10.83□□□□□ -0.68
NUP98-207ENST00000429801 FAM196AQ6ZSG2 479 aa10.83□□□□□ -0.68
NUP98-207ENST00000429801 RBM42Q9BTD8 480 aaKnown RBP10.83□□□□□ -0.68
NUP98-207ENST00000429801 FAM182BQ5T319 152 aa10.83□□□□□ -0.68
NUP98-207ENST00000429801 CLUAP1Q96AJ1 413 aa10.83□□□□□ -0.68
NUP98-207ENST00000429801 DDX21Q9NR30 783 aaKnown RBP eCLIP10.83□□□□□ -0.68
NUP98-207ENST00000429801 HYPKQ9NX55 129 aa10.83□□□□□ -0.68
NUP98-207ENST00000429801 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
NUP98-207ENST00000429801 CACNA1FO60840 1977 aa10.83□□□□□ -0.68
NUP98-207ENST00000429801 PSEN1P49768 467 aa10.82□□□□□ -0.68
NUP98-207ENST00000429801 MMP14P50281 582 aa10.82□□□□□ -0.68
NUP98-207ENST00000429801 FLIIQ13045 1269 aa10.82□□□□□ -0.68
NUP98-207ENST00000429801 PANK1Q8TE04 598 aa10.82□□□□□ -0.68
NUP98-207ENST00000429801 CRBNQ96SW2 442 aa10.82□□□□□ -0.68
NUP98-207ENST00000429801 ERBB4Q15303 1308 aa10.82□□□□□ -0.68
NUP98-207ENST00000429801 C5P01031 1676 aa10.82□□□□□ -0.68
NUP98-207ENST00000429801 DNTTIP2Q5QJE6 756 aaKnown RBP10.82□□□□□ -0.68
NUP98-207ENST00000429801 NHSQ6T4R5 1651 aa10.82□□□□□ -0.68
NUP98-207ENST00000429801 LAMB4A4D0S4 1761 aa10.81□□□□□ -0.68
NUP98-207ENST00000429801 STARD3NLO95772 234 aa10.81□□□□□ -0.68
NUP98-207ENST00000429801 FKBP5Q13451 457 aaPredicted RBP10.81□□□□□ -0.68
NUP98-207ENST00000429801 POTEAQ6S8J7 498 aa10.81□□□□□ -0.68
NUP98-207ENST00000429801 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.81□□□□□ -0.68
NUP98-207ENST00000429801 PALLDQ8WX93 1383 aa10.81□□□□□ -0.68
NUP98-207ENST00000429801 RLBP1P12271 317 aa10.81□□□□□ -0.68
NUP98-207ENST00000429801 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
NUP98-207ENST00000429801 G2E3Q7L622 706 aa10.81□□□□□ -0.68
NUP98-207ENST00000429801 EXOC6Q8TAG9 804 aa10.81□□□□□ -0.68
NUP98-207ENST00000429801 BRWD3Q6RI45 1802 aa10.81□□□□□ -0.68
NUP98-207ENST00000429801 ABCC4O15439 1325 aa10.8□□□□□ -0.68
NUP98-207ENST00000429801 MVPQ14764 893 aaKnown RBP10.8□□□□□ -0.68
NUP98-207ENST00000429801 PHAXQ9H814 394 aaKnown RBP10.8□□□□□ -0.68
NUP98-207ENST00000429801 FAM13BQ9NYF5 915 aa10.8□□□□□ -0.68
NUP98-207ENST00000429801 TNNQ9UQP3 1299 aa10.8□□□□□ -0.68
NUP98-207ENST00000429801 COG6Q9Y2V7 657 aa10.8□□□□□ -0.68
NUP98-207ENST00000429801 LOC102724428A0A0B4J2F2 783 aa10.8□□□□□ -0.68
NUP98-207ENST00000429801 SIK1P57059 783 aa10.8□□□□□ -0.68
NUP98-207ENST00000429801 PDIA6Q15084 440 aa10.8□□□□□ -0.68
NUP98-207ENST00000429801 ILDR1Q86SU0 546 aaPredicted RBP10.8□□□□□ -0.68
NUP98-207ENST00000429801 DNAJC10Q8IXB1 793 aa10.8□□□□□ -0.68
NUP98-207ENST00000429801 ZBTB9Q96C00 473 aa10.8□□□□□ -0.68
NUP98-207ENST00000429801 RGS12O14924 1447 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 DDX58O95786 925 aaKnown RBP10.79□□□□□ -0.68
NUP98-207ENST00000429801 ANXA1P04083 346 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 ATP6V1AP38606 617 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 ITPRIPQ8IWB1 547 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 MYL6BP14649 208 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 PROSER3Q2NL68 480 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 GRIPAP1Q4V328 841 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 TMEM57Q8N5G2 664 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 SLC4A9Q96Q91 983 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 DDX19BQ9UMR2 479 aa10.79□□□□□ -0.68
NUP98-207ENST00000429801 SBF2Q86WG5 1849 aa10.78□□□□□ -0.68
NUP98-207ENST00000429801 KIAA1211Q6ZU35 1233 aa10.78□□□□□ -0.68
NUP98-207ENST00000429801 TICAM2Q86XR7 235 aa10.78□□□□□ -0.68
NUP98-207ENST00000429801 PRR29P0C7W0 189 aa10.78□□□□□ -0.68
NUP98-207ENST00000429801 INTS3Q68E01 1043 aaKnown RBP10.78□□□□□ -0.68
NUP98-207ENST00000429801 PANK2Q9BZ23 570 aa10.78□□□□□ -0.68
NUP98-207ENST00000429801 BTAF1O14981 1849 aa10.77□□□□□ -0.68
NUP98-207ENST00000429801 A1BGP04217 495 aa10.77□□□□□ -0.69
NUP98-207ENST00000429801 APPP05067 770 aa10.77□□□□□ -0.69
NUP98-207ENST00000429801 CYP19A1P11511 503 aaPredicted RBP10.77□□□□□ -0.69
NUP98-207ENST00000429801 CCT4P50991 539 aaKnown RBP10.77□□□□□ -0.69
NUP98-207ENST00000429801 PTF1AQ7RTS3 328 aa10.77□□□□□ -0.69
NUP98-207ENST00000429801 ZNF831Q5JPB2 1677 aa10.77□□□□□ -0.69
NUP98-207ENST00000429801 CLGNO14967 610 aa10.77□□□□□ -0.69
NUP98-207ENST00000429801 SLC4A10Q6U841 1118 aa10.77□□□□□ -0.69
NUP98-207ENST00000429801 KSR2Q6VAB6 950 aa10.77□□□□□ -0.69
NUP98-207ENST00000429801 CICQ96RK0 1608 aaPredicted RBP10.76□□□□□ -0.69
NUP98-207ENST00000429801 PI4KAP2A4QPH2 592 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 F6X3S4 739 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 TRIM37O94972 964 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 AIMP1Q12904 312 aaKnown RBP10.76□□□□□ -0.69
NUP98-207ENST00000429801 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 NBPF10Q6P3W6 841 aaKnown RBP10.76□□□□□ -0.69
NUP98-207ENST00000429801 COPS6Q7L5N1 327 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 LRP10Q7Z4F1 713 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 NBPF15Q8N660 670 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 PI4KAP1Q8N8J0 262 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 XAGE3Q8WTP9 111 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 ZNF592Q92610 1267 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 PXDNLA1KZ92 1463 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 TJP1Q07157 1748 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 PIP4K2AP48426 406 aaPredicted RBP10.76□□□□□ -0.69
NUP98-207ENST00000429801 DNAAF4Q8WXU2 420 aa10.76□□□□□ -0.69
NUP98-207ENST00000429801 XRCC6P12956 609 aaKnown RBP eCLIP10.75□□□□□ -0.69
NUP98-207ENST00000429801 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
NUP98-207ENST00000429801 RIC3Q7Z5B4 369 aa10.75□□□□□ -0.69
NUP98-207ENST00000429801 HMGB2P26583 209 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms