RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 KAZALD1Q96I82 304 aa19.84■□□□□ 0.77
MBD4-203ENST00000429544 MYD88Q99836 296 aa19.84■□□□□ 0.77
MBD4-203ENST00000429544 BICC1Q9H694 974 aaKnown RBP19.84■□□□□ 0.77
MBD4-203ENST00000429544 NHSL1Q5SYE7 1610 aa19.84■□□□□ 0.77
MBD4-203ENST00000429544 NEURL1BA8MQ27 555 aa19.83■□□□□ 0.76
MBD4-203ENST00000429544 LRP10Q7Z4F1 713 aa19.83■□□□□ 0.76
MBD4-203ENST00000429544 ARFGEF2Q9Y6D5 1785 aa19.83■□□□□ 0.76
MBD4-203ENST00000429544 METTL22Q9BUU2 404 aaPredicted RBP19.82■□□□□ 0.76
MBD4-203ENST00000429544 SHANK3Q9BYB0 1731 aa19.82■□□□□ 0.76
MBD4-203ENST00000429544 ANO2Q9NQ90 1003 aa19.82■□□□□ 0.76
MBD4-203ENST00000429544 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
MBD4-203ENST00000429544 ANKRD13DQ6ZTN6 518 aa19.81■□□□□ 0.76
MBD4-203ENST00000429544 ST18O60284 1047 aa19.8■□□□□ 0.76
MBD4-203ENST00000429544 GCKRQ14397 625 aa19.8■□□□□ 0.76
MBD4-203ENST00000429544 ERC1Q8IUD2 1116 aa19.8■□□□□ 0.76
MBD4-203ENST00000429544 CLASRPQ8N2M8 674 aaKnown RBP19.8■□□□□ 0.76
MBD4-203ENST00000429544 CARD10Q9BWT7 1032 aa19.8■□□□□ 0.76
MBD4-203ENST00000429544 UBR2Q8IWV8 1755 aa19.8■□□□□ 0.76
MBD4-203ENST00000429544 USP42Q9H9J4 1324 aaKnown RBP19.8■□□□□ 0.76
MBD4-203ENST00000429544 IL2RBP14784 551 aa19.8■□□□□ 0.76
MBD4-203ENST00000429544 TNPO1Q92973 898 aaKnown RBP19.79■□□□□ 0.76
MBD4-203ENST00000429544 MCCP23508 829 aa19.79■□□□□ 0.76
MBD4-203ENST00000429544 RAB3GAP1Q15042 981 aa19.79■□□□□ 0.76
MBD4-203ENST00000429544 TTC41PQ6P2S7 1318 aa19.78■□□□□ 0.76
MBD4-203ENST00000429544 CNTROBQ8N137 903 aa19.78■□□□□ 0.76
MBD4-203ENST00000429544 IL25Q9H293 177 aa19.78■□□□□ 0.76
MBD4-203ENST00000429544 PAPPAQ13219 1627 aa19.78■□□□□ 0.76
MBD4-203ENST00000429544 EVA1CP58658 441 aa19.78■□□□□ 0.76
MBD4-203ENST00000429544 DDX54Q8TDD1 881 aaKnown RBP19.78■□□□□ 0.76
MBD4-203ENST00000429544 PALD1Q9ULE6 856 aa19.77■□□□□ 0.76
MBD4-203ENST00000429544 ERVV-2B6SEH9 535 aa19.77■□□□□ 0.75
MBD4-203ENST00000429544 GLRX3O76003 335 aaKnown RBP19.77■□□□□ 0.75
MBD4-203ENST00000429544 IFIT2P09913 472 aaKnown RBP19.77■□□□□ 0.75
MBD4-203ENST00000429544 G3BP1Q13283 466 aaKnown RBP eCLIP19.77■□□□□ 0.75
MBD4-203ENST00000429544 JARID2Q92833 1246 aaPredicted RBP19.77■□□□□ 0.75
MBD4-203ENST00000429544 EPHA10Q5JZY3 1008 aa19.76■□□□□ 0.75
MBD4-203ENST00000429544 KCPQ6ZWJ8 1503 aa19.76■□□□□ 0.75
MBD4-203ENST00000429544 AACSQ86V21 672 aa19.76■□□□□ 0.75
MBD4-203ENST00000429544 SIL1Q9H173 461 aa19.76■□□□□ 0.75
MBD4-203ENST00000429544 SASH1O94885 1247 aa19.75■□□□□ 0.75
MBD4-203ENST00000429544 GPATCH3Q96I76 525 aa19.75■□□□□ 0.75
MBD4-203ENST00000429544 DDX11L8A8MPP1 907 aa19.75■□□□□ 0.75
MBD4-203ENST00000429544 ATP5J2-PTCD1G3V325 749 aa19.75■□□□□ 0.75
MBD4-203ENST00000429544 PTCD1O75127 700 aaKnown RBP19.75■□□□□ 0.75
MBD4-203ENST00000429544 NKX1-1Q15270 411 aaPredicted RBP19.75■□□□□ 0.75
MBD4-203ENST00000429544 ECHDC1Q9NTX5 307 aa19.75■□□□□ 0.75
MBD4-203ENST00000429544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.75■□□□□ 0.75
MBD4-203ENST00000429544 TOGARAM1Q9Y4F4 1720 aa19.74■□□□□ 0.75
MBD4-203ENST00000429544 NEK4P51957 841 aa19.74■□□□□ 0.75
MBD4-203ENST00000429544 KLHDC4Q8TBB5 520 aa19.74■□□□□ 0.75
MBD4-203ENST00000429544 NBPF26B4DH59 902 aa19.74■□□□□ 0.75
MBD4-203ENST00000429544 SSFA2P28290 1259 aa19.74■□□□□ 0.75
MBD4-203ENST00000429544 NBPF14Q5TI25 921 aa19.74■□□□□ 0.75
MBD4-203ENST00000429544 NBPF10Q6P3W6 841 aaKnown RBP19.74■□□□□ 0.75
MBD4-203ENST00000429544 NBPF15Q8N660 670 aa19.74■□□□□ 0.75
MBD4-203ENST00000429544 PLBD2Q8NHP8 589 aa19.74■□□□□ 0.75
MBD4-203ENST00000429544 GBP4Q96PP9 640 aa19.73■□□□□ 0.75
MBD4-203ENST00000429544 NUP188Q5SRE5 1749 aa19.73■□□□□ 0.75
MBD4-203ENST00000429544 SGSM2O43147 1006 aa19.73■□□□□ 0.75
MBD4-203ENST00000429544 ANAPC15P60006 121 aa19.73■□□□□ 0.75
MBD4-203ENST00000429544 UBE3BQ7Z3V4 1068 aa19.73■□□□□ 0.75
MBD4-203ENST00000429544 ERBB4Q15303 1308 aa19.72■□□□□ 0.75
MBD4-203ENST00000429544 TRAK2O60296 914 aa19.71■□□□□ 0.75
MBD4-203ENST00000429544 EAF2Q96CJ1 260 aaPredicted RBP19.71■□□□□ 0.75
MBD4-203ENST00000429544 CCDC8Q9H0W5 538 aaPredicted RBP19.71■□□□□ 0.75
MBD4-203ENST00000429544 A0A087WZG4 1122 aa19.7■□□□□ 0.74
MBD4-203ENST00000429544 A1BGP04217 495 aa19.7■□□□□ 0.74
MBD4-203ENST00000429544 CWC27Q6UX04 472 aaKnown RBP19.7■□□□□ 0.74
MBD4-203ENST00000429544 TTLL7Q6ZT98 887 aa19.7■□□□□ 0.74
MBD4-203ENST00000429544 TNS2Q63HR2 1409 aa19.7■□□□□ 0.74
MBD4-203ENST00000429544 RAD50Q92878 1312 aa19.69■□□□□ 0.74
MBD4-203ENST00000429544 EPB41L2O43491 1005 aaKnown RBP19.69■□□□□ 0.74
MBD4-203ENST00000429544 ZGPATQ8N5A5 531 aaKnown RBP19.69■□□□□ 0.74
MBD4-203ENST00000429544 DIAPH3Q9NSV4 1193 aa19.69■□□□□ 0.74
MBD4-203ENST00000429544 TLR7Q9NYK1 1049 aaKnown RBP19.69■□□□□ 0.74
MBD4-203ENST00000429544 HSPA4P34932 840 aa19.69■□□□□ 0.74
MBD4-203ENST00000429544 LSG1Q9H089 658 aaKnown RBP19.68■□□□□ 0.74
MBD4-203ENST00000429544 GZF1Q9H116 711 aaPredicted RBP19.68■□□□□ 0.74
MBD4-203ENST00000429544 BTG4Q9NY30 223 aa19.68■□□□□ 0.74
MBD4-203ENST00000429544 IL17RAQ96F46 866 aa19.68■□□□□ 0.74
MBD4-203ENST00000429544 TJP1Q07157 1748 aa19.68■□□□□ 0.74
MBD4-203ENST00000429544 COL15A1P39059 1388 aa19.68■□□□□ 0.74
MBD4-203ENST00000429544 RFX5P48382 616 aaPredicted RBP19.67■□□□□ 0.74
MBD4-203ENST00000429544 CASP7P55210 303 aa19.67■□□□□ 0.74
MBD4-203ENST00000429544 RABL6Q3YEC7 729 aaPredicted RBP19.67■□□□□ 0.74
MBD4-203ENST00000429544 NOL8Q76FK4 1167 aaKnown RBP19.67■□□□□ 0.74
MBD4-203ENST00000429544 EVI5LQ96CN4 794 aa19.67■□□□□ 0.74
MBD4-203ENST00000429544 TMX3Q96JJ7 454 aa19.67■□□□□ 0.74
MBD4-203ENST00000429544 UPF3BQ9BZI7 483 aaKnown RBP19.67■□□□□ 0.74
MBD4-203ENST00000429544 CWC22Q9HCG8 908 aaKnown RBP19.67■□□□□ 0.74
MBD4-203ENST00000429544 COPRSQ9NQ92 184 aa19.67■□□□□ 0.74
MBD4-203ENST00000429544 TMOD3Q9NYL9 352 aa19.67■□□□□ 0.74
MBD4-203ENST00000429544 MCM2P49736 904 aa19.66■□□□□ 0.74
MBD4-203ENST00000429544 KIAA1211Q6ZU35 1233 aa19.66■□□□□ 0.74
MBD4-203ENST00000429544 NUCB2P80303 420 aa19.66■□□□□ 0.74
MBD4-203ENST00000429544 PTPN12Q05209 780 aaKnown RBP19.66■□□□□ 0.74
MBD4-203ENST00000429544 RUFY2Q8WXA3 655 aa19.66■□□□□ 0.74
MBD4-203ENST00000429544 ZBTB3Q9H5J0 574 aa19.66■□□□□ 0.74
MBD4-203ENST00000429544 ROBO1Q9Y6N7 1651 aa19.65■□□□□ 0.74
MBD4-203ENST00000429544 COL14A1Q05707 1796 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms