RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
SENP3-202ENST00000429205 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
SENP3-202ENST00000429205 DDX54Q8TDD1 881 aaKnown RBP16.47■□□□□ 0.23
SENP3-202ENST00000429205 GCC1Q96CN9 775 aa16.47■□□□□ 0.23
SENP3-202ENST00000429205 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
SENP3-202ENST00000429205 CCDC94Q9BW85 323 aaPredicted RBP16.46■□□□□ 0.23
SENP3-202ENST00000429205 LNPKQ9C0E8 428 aa16.46■□□□□ 0.23
SENP3-202ENST00000429205 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
SENP3-202ENST00000429205 RPAP2Q8IXW5 612 aaPredicted RBP16.46■□□□□ 0.23
SENP3-202ENST00000429205 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
SENP3-202ENST00000429205 PI4KAP2A4QPH2 592 aa16.45■□□□□ 0.22
SENP3-202ENST00000429205 ANKRD45Q5TZF3 282 aa16.45■□□□□ 0.22
SENP3-202ENST00000429205 PI4KAP1Q8N8J0 262 aa16.45■□□□□ 0.22
SENP3-202ENST00000429205 ZNF592Q92610 1267 aa16.45■□□□□ 0.22
SENP3-202ENST00000429205 CACNA1FO60840 1977 aa16.45■□□□□ 0.22
SENP3-202ENST00000429205 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
SENP3-202ENST00000429205 NUTM2BA6NNL0 878 aaPredicted RBP16.45■□□□□ 0.22
SENP3-202ENST00000429205 NUTM2EB1AL46 878 aaPredicted RBP16.45■□□□□ 0.22
SENP3-202ENST00000429205 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
SENP3-202ENST00000429205 UBAP1LF5GYI3 381 aa16.45■□□□□ 0.22
SENP3-202ENST00000429205 NKX1-1Q15270 411 aaPredicted RBP16.45■□□□□ 0.22
SENP3-202ENST00000429205 NUTM2AQ8IVF1 878 aaPredicted RBP16.45■□□□□ 0.22
SENP3-202ENST00000429205 PXDNLA1KZ92 1463 aa16.45■□□□□ 0.22
SENP3-202ENST00000429205 FSD2A1L4K1 749 aa16.44■□□□□ 0.22
SENP3-202ENST00000429205 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.44■□□□□ 0.22
SENP3-202ENST00000429205 TSPYL1Q9H0U9 437 aa16.44■□□□□ 0.22
SENP3-202ENST00000429205 DNAAF4Q8WXU2 420 aa16.43■□□□□ 0.22
SENP3-202ENST00000429205 DCTPP1Q9H773 170 aa16.43■□□□□ 0.22
SENP3-202ENST00000429205 C5P01031 1676 aa16.43■□□□□ 0.22
SENP3-202ENST00000429205 ADCY9O60503 1353 aa16.43■□□□□ 0.22
SENP3-202ENST00000429205 GNAI2P04899 355 aa16.43■□□□□ 0.22
SENP3-202ENST00000429205 GNAI3P08754 354 aa16.43■□□□□ 0.22
SENP3-202ENST00000429205 PDIA6Q15084 440 aa16.43■□□□□ 0.22
SENP3-202ENST00000429205 USP44Q9H0E7 712 aa16.43■□□□□ 0.22
SENP3-202ENST00000429205 ERVV-2B6SEH9 535 aa16.42■□□□□ 0.22
SENP3-202ENST00000429205 OFD1O75665 1012 aa16.42■□□□□ 0.22
SENP3-202ENST00000429205 SNRPA1P09661 255 aaKnown RBP16.42■□□□□ 0.22
SENP3-202ENST00000429205 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
SENP3-202ENST00000429205 FMNL2Q96PY5 1086 aa16.42■□□□□ 0.22
SENP3-202ENST00000429205 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
SENP3-202ENST00000429205 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
SENP3-202ENST00000429205 HYPKQ9NX55 129 aa16.42■□□□□ 0.22
SENP3-202ENST00000429205 PLCH1Q4KWH8 1693 aa16.42■□□□□ 0.22
SENP3-202ENST00000429205 BEND3Q5T5X7 828 aa16.42■□□□□ 0.22
SENP3-202ENST00000429205 PSMD1Q99460 953 aa16.42■□□□□ 0.22
SENP3-202ENST00000429205 DYNC1I1O14576 645 aa16.41■□□□□ 0.22
SENP3-202ENST00000429205 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
SENP3-202ENST00000429205 IGSF3O75054 1194 aa16.4■□□□□ 0.22
SENP3-202ENST00000429205 MAP3K2Q9Y2U5 619 aa16.4■□□□□ 0.22
SENP3-202ENST00000429205 AIMP1Q12904 312 aaKnown RBP16.39■□□□□ 0.22
SENP3-202ENST00000429205 KSR2Q6VAB6 950 aa16.39■□□□□ 0.22
SENP3-202ENST00000429205 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.22
SENP3-202ENST00000429205 DISP2A7MBM2 1401 aa16.39■□□□□ 0.21
SENP3-202ENST00000429205 MYL6BP14649 208 aa16.39■□□□□ 0.21
SENP3-202ENST00000429205 HMMRO75330 724 aa16.38■□□□□ 0.21
SENP3-202ENST00000429205 UBTFL1P0CB47 393 aaPredicted RBP16.38■□□□□ 0.21
SENP3-202ENST00000429205 N4BP2Q86UW6 1770 aaPredicted RBP16.38■□□□□ 0.21
SENP3-202ENST00000429205 SEC24BO95487 1268 aa16.38■□□□□ 0.21
SENP3-202ENST00000429205 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
SENP3-202ENST00000429205 FAM43BQ6ZT52 329 aaPredicted RBP16.38■□□□□ 0.21
SENP3-202ENST00000429205 TOGARAM1Q9Y4F4 1720 aa16.37■□□□□ 0.21
SENP3-202ENST00000429205 NBPF7P0C2Y1 421 aaPredicted RBP16.37■□□□□ 0.21
SENP3-202ENST00000429205 PNMA6EA0A0J9YXQ4 647 aa16.37■□□□□ 0.21
SENP3-202ENST00000429205 TMED8Q6PL24 325 aaPredicted RBP16.37■□□□□ 0.21
SENP3-202ENST00000429205 NRAPQ86VF7 1730 aa16.36■□□□□ 0.21
SENP3-202ENST00000429205 APBB1O00213 710 aa16.36■□□□□ 0.21
SENP3-202ENST00000429205 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
SENP3-202ENST00000429205 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
SENP3-202ENST00000429205 ATP8B2P98198 1209 aa16.36■□□□□ 0.21
SENP3-202ENST00000429205 LRP10Q7Z4F1 713 aa16.36■□□□□ 0.21
SENP3-202ENST00000429205 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
SENP3-202ENST00000429205 GLI3P10071 1580 aa16.36■□□□□ 0.21
SENP3-202ENST00000429205 PTCD1O75127 700 aaKnown RBP16.35■□□□□ 0.21
SENP3-202ENST00000429205 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
SENP3-202ENST00000429205 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
SENP3-202ENST00000429205 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
SENP3-202ENST00000429205 XRCC6P12956 609 aaKnown RBP eCLIP16.34■□□□□ 0.21
SENP3-202ENST00000429205 EGFL6Q8IUX8 553 aa16.34■□□□□ 0.21
SENP3-202ENST00000429205 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
SENP3-202ENST00000429205 EXOC5O00471 708 aa16.34■□□□□ 0.21
SENP3-202ENST00000429205 SMARCA5O60264 1052 aaPredicted RBP16.34■□□□□ 0.21
SENP3-202ENST00000429205 ALDH1L1O75891 902 aa16.34■□□□□ 0.21
SENP3-202ENST00000429205 MRE11P49959 708 aa16.34■□□□□ 0.21
SENP3-202ENST00000429205 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
SENP3-202ENST00000429205 C16orf71Q8IYS4 520 aaPredicted RBP16.34■□□□□ 0.21
SENP3-202ENST00000429205 SPATA31A1Q5TZJ5 1347 aa16.33■□□□□ 0.21
SENP3-202ENST00000429205 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.21
SENP3-202ENST00000429205 PIGBQ92521 554 aa16.33■□□□□ 0.2
SENP3-202ENST00000429205 EXOC6BQ9Y2D4 811 aa16.33■□□□□ 0.2
SENP3-202ENST00000429205 LINS1Q8NG48 757 aa16.33■□□□□ 0.2
SENP3-202ENST00000429205 EFCC1Q9HA90 598 aa16.33■□□□□ 0.2
SENP3-202ENST00000429205 PAPPAQ13219 1627 aa16.33■□□□□ 0.2
SENP3-202ENST00000429205 TNS2Q63HR2 1409 aa16.32■□□□□ 0.2
SENP3-202ENST00000429205 UBR2Q8IWV8 1755 aa16.32■□□□□ 0.2
SENP3-202ENST00000429205 PLEKHM2Q8IWE5 1019 aa16.32■□□□□ 0.2
SENP3-202ENST00000429205 OTUD7AQ8TE49 926 aaPredicted RBP16.32■□□□□ 0.2
SENP3-202ENST00000429205 LAMB4A4D0S4 1761 aa16.32■□□□□ 0.2
SENP3-202ENST00000429205 NBPF26B4DH59 902 aa16.31■□□□□ 0.2
SENP3-202ENST00000429205 BMP2KLQ5H9B9 411 aa16.31■□□□□ 0.2
SENP3-202ENST00000429205 NBPF14Q5TI25 921 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms