RNA–Protein interactions for RNA: ENST00000428647.1

LINC01873-201, Transcript of long intergenic non-protein coding RNA 1873, humanhuman

TSL 1 (best) BASIC

Gene LINC01873, Length 1,679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01873-201ENST00000428647 PI4KAP2A4QPH2 592 aa17.15■□□□□ 0.34
LINC01873-201ENST00000428647 RNMTO43148 476 aaKnown RBP17.15■□□□□ 0.34
LINC01873-201ENST00000428647 NBPF6Q5VWK0 638 aa17.15■□□□□ 0.34
LINC01873-201ENST00000428647 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
LINC01873-201ENST00000428647 PI4KAP1Q8N8J0 262 aa17.15■□□□□ 0.34
LINC01873-201ENST00000428647 NBPF4Q96M43 638 aa17.15■□□□□ 0.34
LINC01873-201ENST00000428647 ALDH8A1Q9H2A2 487 aaPredicted RBP17.15■□□□□ 0.34
LINC01873-201ENST00000428647 CHPF2Q9P2E5 772 aa17.15■□□□□ 0.34
LINC01873-201ENST00000428647 SNX14Q9Y5W7 946 aa17.15■□□□□ 0.34
LINC01873-201ENST00000428647 ZNF530Q6P9A1 599 aaPredicted RBP17.14■□□□□ 0.33
LINC01873-201ENST00000428647 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
LINC01873-201ENST00000428647 ARHGEF25Q86VW2 580 aa17.13■□□□□ 0.33
LINC01873-201ENST00000428647 IL1RAPL2Q9NP60 686 aa17.13■□□□□ 0.33
LINC01873-201ENST00000428647 DIAPH3Q9NSV4 1193 aa17.13■□□□□ 0.33
LINC01873-201ENST00000428647 ZKSCAN5Q9Y2L8 839 aa17.13■□□□□ 0.33
LINC01873-201ENST00000428647 ZSCAN22P10073 491 aaPredicted RBP17.13■□□□□ 0.33
LINC01873-201ENST00000428647 UBE2HP62256 183 aa17.13■□□□□ 0.33
LINC01873-201ENST00000428647 CCDC183Q5T5S1 534 aa17.13■□□□□ 0.33
LINC01873-201ENST00000428647 TCHHQ07283 1943 aa17.13■□□□□ 0.33
LINC01873-201ENST00000428647 CCDC171Q6TFL3 1326 aa17.13■□□□□ 0.33
LINC01873-201ENST00000428647 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
LINC01873-201ENST00000428647 NBPF7P0C2Y1 421 aaPredicted RBP17.12■□□□□ 0.33
LINC01873-201ENST00000428647 NUTM1Q86Y26 1132 aa17.12■□□□□ 0.33
LINC01873-201ENST00000428647 PSMA5P28066 241 aa17.11■□□□□ 0.33
LINC01873-201ENST00000428647 PSME1Q06323 249 aa17.11■□□□□ 0.33
LINC01873-201ENST00000428647 ANKRD1Q15327 319 aa17.11■□□□□ 0.33
LINC01873-201ENST00000428647 TSHZ3Q63HK5 1081 aa17.11■□□□□ 0.33
LINC01873-201ENST00000428647 ZSWIM6Q9HCJ5 1215 aa17.11■□□□□ 0.33
LINC01873-201ENST00000428647 DDX21Q9NR30 783 aaKnown RBP eCLIP17.11■□□□□ 0.33
LINC01873-201ENST00000428647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.11■□□□□ 0.33
LINC01873-201ENST00000428647 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
LINC01873-201ENST00000428647 JCADQ9P266 1359 aa17.11■□□□□ 0.33
LINC01873-201ENST00000428647 SYCE3A1L190 88 aa17.1■□□□□ 0.33
LINC01873-201ENST00000428647 STX6O43752 255 aa17.1■□□□□ 0.33
LINC01873-201ENST00000428647 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
LINC01873-201ENST00000428647 NECTIN2Q92692 538 aa17.1■□□□□ 0.33
LINC01873-201ENST00000428647 LTV1Q96GA3 475 aaPredicted RBP17.1■□□□□ 0.33
LINC01873-201ENST00000428647 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
LINC01873-201ENST00000428647 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
LINC01873-201ENST00000428647 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
LINC01873-201ENST00000428647 IFIT2P09913 472 aaKnown RBP17.1■□□□□ 0.33
LINC01873-201ENST00000428647 EIF2S2P20042 333 aaKnown RBP17.1■□□□□ 0.33
LINC01873-201ENST00000428647 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
LINC01873-201ENST00000428647 LGR6Q9HBX8 967 aa17.1■□□□□ 0.33
LINC01873-201ENST00000428647 HMG20BQ9P0W2 317 aa17.1■□□□□ 0.33
LINC01873-201ENST00000428647 PDCP20941 246 aa17.09■□□□□ 0.33
LINC01873-201ENST00000428647 AK2P54819 239 aa17.09■□□□□ 0.33
LINC01873-201ENST00000428647 TSGA10IPQ3SY00 556 aa17.09■□□□□ 0.33
LINC01873-201ENST00000428647 GLIPR1L2Q4G1C9 344 aa17.09■□□□□ 0.33
LINC01873-201ENST00000428647 RNF20Q5VTR2 975 aa17.09■□□□□ 0.33
LINC01873-201ENST00000428647 UPF3BQ9BZI7 483 aaKnown RBP17.09■□□□□ 0.33
LINC01873-201ENST00000428647 CYP46A1Q9Y6A2 500 aa17.09■□□□□ 0.33
LINC01873-201ENST00000428647 ADAMTSL3P82987 1691 aa17.09■□□□□ 0.33
LINC01873-201ENST00000428647 LAMB4A4D0S4 1761 aa17.08■□□□□ 0.32
LINC01873-201ENST00000428647 GRM8O00222 908 aa17.08■□□□□ 0.32
LINC01873-201ENST00000428647 F13A1P00488 732 aa17.08■□□□□ 0.32
LINC01873-201ENST00000428647 PXDNQ92626 1479 aa17.08■□□□□ 0.32
LINC01873-201ENST00000428647 GCP02774 474 aa17.07■□□□□ 0.32
LINC01873-201ENST00000428647 NECTIN1Q15223 517 aa17.07■□□□□ 0.32
LINC01873-201ENST00000428647 LARP1Q6PKG0 1096 aaKnown RBP17.07■□□□□ 0.32
LINC01873-201ENST00000428647 MAP7D2Q96T17 732 aa17.07■□□□□ 0.32
LINC01873-201ENST00000428647 RBM27Q9P2N5 1060 aaKnown RBP17.07■□□□□ 0.32
LINC01873-201ENST00000428647 MAP3K2Q9Y2U5 619 aa17.07■□□□□ 0.32
LINC01873-201ENST00000428647 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
LINC01873-201ENST00000428647 TPM3P06753 285 aa17.07■□□□□ 0.32
LINC01873-201ENST00000428647 NUTM2GQ5VZR2 741 aa17.07■□□□□ 0.32
LINC01873-201ENST00000428647 RUFY3Q7L099 469 aa17.07■□□□□ 0.32
LINC01873-201ENST00000428647 USP48Q86UV5 1035 aa17.07■□□□□ 0.32
LINC01873-201ENST00000428647 NPHP4O75161 1426 aaPredicted RBP17.06■□□□□ 0.32
LINC01873-201ENST00000428647 ELP1O95163 1332 aa17.06■□□□□ 0.32
LINC01873-201ENST00000428647 G3BP1Q13283 466 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC01873-201ENST00000428647 C14orf37Q86TY3 774 aa17.06■□□□□ 0.32
LINC01873-201ENST00000428647 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
LINC01873-201ENST00000428647 UBE2Q2Q8WVN8 375 aa17.06■□□□□ 0.32
LINC01873-201ENST00000428647 MAP4K1Q92918 833 aa17.06■□□□□ 0.32
LINC01873-201ENST00000428647 IL25Q9H293 177 aa17.06■□□□□ 0.32
LINC01873-201ENST00000428647 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
LINC01873-201ENST00000428647 C5P01031 1676 aa17.05■□□□□ 0.32
LINC01873-201ENST00000428647 SYT1P21579 422 aa17.05■□□□□ 0.32
LINC01873-201ENST00000428647 KRT32Q14532 448 aa17.05■□□□□ 0.32
LINC01873-201ENST00000428647 MTERF4Q7Z6M4 381 aaKnown RBP17.05■□□□□ 0.32
LINC01873-201ENST00000428647 NEXNQ0ZGT2 675 aa17.04■□□□□ 0.32
LINC01873-201ENST00000428647 CWC27Q6UX04 472 aaKnown RBP17.04■□□□□ 0.32
LINC01873-201ENST00000428647 DCCP43146 1447 aa17.04■□□□□ 0.32
LINC01873-201ENST00000428647 MED23Q9ULK4 1368 aa17.04■□□□□ 0.32
LINC01873-201ENST00000428647 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
LINC01873-201ENST00000428647 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
LINC01873-201ENST00000428647 RASEFQ8IZ41 740 aa17.04■□□□□ 0.32
LINC01873-201ENST00000428647 ANKRD24Q8TF21 1146 aa17.04■□□□□ 0.32
LINC01873-201ENST00000428647 NSFL1CQ9UNZ2 370 aaKnown RBP17.04■□□□□ 0.32
LINC01873-201ENST00000428647 SPEF2Q9C093 1822 aa17.03■□□□□ 0.32
LINC01873-201ENST00000428647 CHMP4CQ96CF2 233 aa17.03■□□□□ 0.32
LINC01873-201ENST00000428647 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.32
LINC01873-201ENST00000428647 COL18A1P39060 1754 aa17.02■□□□□ 0.32
LINC01873-201ENST00000428647 RGPD5Q99666 1765 aa17.02■□□□□ 0.32
LINC01873-201ENST00000428647 COPRSQ9NQ92 184 aa17.02■□□□□ 0.32
LINC01873-201ENST00000428647 HSP90AA2PQ14568 343 aaPredicted RBP17.01■□□□□ 0.31
LINC01873-201ENST00000428647 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
LINC01873-201ENST00000428647 AACSQ86V21 672 aa17.01■□□□□ 0.31
LINC01873-201ENST00000428647 JAKMIP1Q96N16 626 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms