RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TNRC6CQ9HCJ0 1690 aaKnown RBP20.59■□□□□ 0.89
SEC13-210ENST00000428626 HLFQ16534 295 aa20.59■□□□□ 0.89
SEC13-210ENST00000428626 CLEC4GQ6UXB4 293 aa20.59■□□□□ 0.89
SEC13-210ENST00000428626 SRGNP10124 158 aa20.58■□□□□ 0.89
SEC13-210ENST00000428626 EIF4A1P60842 406 aaKnown RBP20.58■□□□□ 0.89
SEC13-210ENST00000428626 RBM46Q8TBY0 533 aaKnown RBP20.58■□□□□ 0.89
SEC13-210ENST00000428626 PDZRN3Q9UPQ7 1066 aa20.58■□□□□ 0.89
SEC13-210ENST00000428626 ZC3H4Q9UPT8 1303 aaKnown RBP20.56■□□□□ 0.88
SEC13-210ENST00000428626 ST5P78524 1137 aa20.56■□□□□ 0.88
SEC13-210ENST00000428626 NBPF5PQ86XG9 351 aaPredicted RBP20.56■□□□□ 0.88
SEC13-210ENST00000428626 NIP7Q9Y221 180 aaKnown RBP eCLIP20.56■□□□□ 0.88
SEC13-210ENST00000428626 ARFGEF2Q9Y6D5 1785 aa20.56■□□□□ 0.88
SEC13-210ENST00000428626 NEFMP07197 916 aa20.55■□□□□ 0.88
SEC13-210ENST00000428626 APLP1P51693 650 aa20.55■□□□□ 0.88
SEC13-210ENST00000428626 STYK1Q6J9G0 422 aa20.55■□□□□ 0.88
SEC13-210ENST00000428626 PRPF40BQ6NWY9 871 aaKnown RBP20.55■□□□□ 0.88
SEC13-210ENST00000428626 DNAJC5GQ8N7S2 189 aa20.55■□□□□ 0.88
SEC13-210ENST00000428626 GLTPD2A6NH11 291 aa20.54■□□□□ 0.88
SEC13-210ENST00000428626 FAM177BA6PVY3 158 aa20.54■□□□□ 0.88
SEC13-210ENST00000428626 NPHP1O15259 732 aa20.54■□□□□ 0.88
SEC13-210ENST00000428626 HTRA3P83110 453 aa20.54■□□□□ 0.88
SEC13-210ENST00000428626 NGEFQ8N5V2 710 aa20.54■□□□□ 0.88
SEC13-210ENST00000428626 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
SEC13-210ENST00000428626 MASTLQ96GX5 879 aa20.54■□□□□ 0.88
SEC13-210ENST00000428626 ZNF652Q9Y2D9 606 aa20.54■□□□□ 0.88
SEC13-210ENST00000428626 DICER1Q9UPY3 1922 aaKnown RBP20.54■□□□□ 0.88
SEC13-210ENST00000428626 KLRG2A4D1S0 409 aaPredicted RBP20.53■□□□□ 0.88
SEC13-210ENST00000428626 POTECB2RU33 542 aa20.53■□□□□ 0.88
SEC13-210ENST00000428626 RGL2O15211 777 aa20.53■□□□□ 0.88
SEC13-210ENST00000428626 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
SEC13-210ENST00000428626 TTLL7Q6ZT98 887 aa20.53■□□□□ 0.88
SEC13-210ENST00000428626 C7orf43Q8WVR3 580 aa20.53■□□□□ 0.88
SEC13-210ENST00000428626 CNKSR1Q969H4 720 aa20.53■□□□□ 0.88
SEC13-210ENST00000428626 NUP98P52948 1817 aa20.53■□□□□ 0.88
SEC13-210ENST00000428626 MAPK8IP3Q9UPT6 1336 aa20.53■□□□□ 0.88
SEC13-210ENST00000428626 RALBP1Q15311 655 aa20.52■□□□□ 0.88
SEC13-210ENST00000428626 C16orf71Q8IYS4 520 aaPredicted RBP20.52■□□□□ 0.88
SEC13-210ENST00000428626 RRP7AQ9Y3A4 280 aaKnown RBP20.52■□□□□ 0.88
SEC13-210ENST00000428626 WDR90Q96KV7 1748 aa20.52■□□□□ 0.88
SEC13-210ENST00000428626 OLFM4Q6UX06 510 aa20.51■□□□□ 0.87
SEC13-210ENST00000428626 LTBP3Q9NS15 1303 aa20.51■□□□□ 0.87
SEC13-210ENST00000428626 ABCC12Q96J65 1359 aa20.5■□□□□ 0.87
SEC13-210ENST00000428626 MYL6BP14649 208 aa20.5■□□□□ 0.87
SEC13-210ENST00000428626 FSTL1Q12841 308 aa20.5■□□□□ 0.87
SEC13-210ENST00000428626 TPTE2Q6XPS3 522 aa20.5■□□□□ 0.87
SEC13-210ENST00000428626 TAOK3Q9H2K8 898 aa20.5■□□□□ 0.87
SEC13-210ENST00000428626 NPR1P16066 1061 aa20.49■□□□□ 0.87
SEC13-210ENST00000428626 RIPK4P57078 832 aa20.49■□□□□ 0.87
SEC13-210ENST00000428626 ERFEQ4G0M1 354 aa20.49■□□□□ 0.87
SEC13-210ENST00000428626 LRP10Q7Z4F1 713 aa20.49■□□□□ 0.87
SEC13-210ENST00000428626 MAP3K15Q6ZN16 1313 aa20.49■□□□□ 0.87
SEC13-210ENST00000428626 ERVV-1B6SEH8 477 aa20.48■□□□□ 0.87
SEC13-210ENST00000428626 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
SEC13-210ENST00000428626 TMPOP42166 694 aaKnown RBP20.48■□□□□ 0.87
SEC13-210ENST00000428626 NUTM1Q86Y26 1132 aa20.48■□□□□ 0.87
SEC13-210ENST00000428626 PNNQ9H307 717 aaKnown RBP20.48■□□□□ 0.87
SEC13-210ENST00000428626 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
SEC13-210ENST00000428626 UBN2Q6ZU65 1347 aa20.48■□□□□ 0.87
SEC13-210ENST00000428626 PDIA6Q15084 440 aa20.47■□□□□ 0.87
SEC13-210ENST00000428626 ZBTB3Q9H5J0 574 aa20.47■□□□□ 0.87
SEC13-210ENST00000428626 GPTP24298 496 aa20.46■□□□□ 0.87
SEC13-210ENST00000428626 CCDC146Q8IYE0 955 aa20.46■□□□□ 0.87
SEC13-210ENST00000428626 MYBBP1AQ9BQG0 1328 aaKnown RBP20.46■□□□□ 0.87
SEC13-210ENST00000428626 ANXA1P04083 346 aa20.45■□□□□ 0.86
SEC13-210ENST00000428626 PROSER3Q2NL68 480 aa20.45■□□□□ 0.86
SEC13-210ENST00000428626 SLC51AQ86UW1 340 aa20.45■□□□□ 0.86
SEC13-210ENST00000428626 SMC1BQ8NDV3 1235 aa20.45■□□□□ 0.86
SEC13-210ENST00000428626 DDNO94850 711 aaPredicted RBP20.44■□□□□ 0.86
SEC13-210ENST00000428626 CRY2Q49AN0 593 aa20.44■□□□□ 0.86
SEC13-210ENST00000428626 SUSD4Q5VX71 490 aa20.44■□□□□ 0.86
SEC13-210ENST00000428626 SNED1Q8TER0 1413 aa20.44■□□□□ 0.86
SEC13-210ENST00000428626 CCDC93Q567U6 631 aa20.43■□□□□ 0.86
SEC13-210ENST00000428626 SOGA3Q5TF21 947 aa20.43■□□□□ 0.86
SEC13-210ENST00000428626 DPY19L2Q6NUT2 758 aa20.43■□□□□ 0.86
SEC13-210ENST00000428626 KIF6Q6ZMV9 814 aa20.43■□□□□ 0.86
SEC13-210ENST00000428626 ZNF34Q8IZ26 560 aa20.43■□□□□ 0.86
SEC13-210ENST00000428626 ERBB4Q15303 1308 aa20.43■□□□□ 0.86
SEC13-210ENST00000428626 EIF2S2P20042 333 aaKnown RBP20.42■□□□□ 0.86
SEC13-210ENST00000428626 GTF2E1P29083 439 aaPredicted RBP20.42■□□□□ 0.86
SEC13-210ENST00000428626 NEUROD2Q15784 382 aa20.42■□□□□ 0.86
SEC13-210ENST00000428626 KRT24Q2M2I5 525 aa20.42■□□□□ 0.86
SEC13-210ENST00000428626 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
SEC13-210ENST00000428626 ZNF277Q9NRM2 450 aaPredicted RBP20.42■□□□□ 0.86
SEC13-210ENST00000428626 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
SEC13-210ENST00000428626 POTEIP0CG38 1075 aa20.41■□□□□ 0.86
SEC13-210ENST00000428626 POTEJP0CG39 1038 aa20.41■□□□□ 0.86
SEC13-210ENST00000428626 GIGYF2Q6Y7W6 1299 aaKnown RBP20.41■□□□□ 0.86
SEC13-210ENST00000428626 NTSR2O95665 410 aa20.4■□□□□ 0.86
SEC13-210ENST00000428626 FKBP4Q02790 459 aaKnown RBP eCLIP20.4■□□□□ 0.86
SEC13-210ENST00000428626 KLRG1Q96E93 195 aa20.4■□□□□ 0.86
SEC13-210ENST00000428626 NYXQ9GZU5 481 aa20.4■□□□□ 0.86
SEC13-210ENST00000428626 BABAM1Q9NWV8 329 aa20.4■□□□□ 0.86
SEC13-210ENST00000428626 IBTKQ9P2D0 1353 aaPredicted RBP20.4■□□□□ 0.86
SEC13-210ENST00000428626 RIC1Q4ADV7 1423 aa20.39■□□□□ 0.85
SEC13-210ENST00000428626 ZNF541Q9H0D2 1346 aa20.39■□□□□ 0.85
SEC13-210ENST00000428626 CHL1O00533 1208 aa20.39■□□□□ 0.85
SEC13-210ENST00000428626 NECTIN2Q92692 538 aa20.39■□□□□ 0.85
SEC13-210ENST00000428626 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
SEC13-210ENST00000428626 PCNTO95613 3336 aa20.38■□□□□ 0.85
SEC13-210ENST00000428626 ALDH1B1P30837 517 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms