RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 SNED1Q8TER0 1413 aa11.01□□□□□ -0.65
CSTF1-203ENST00000428552 A0A087WZG4 1122 aa11.01□□□□□ -0.65
CSTF1-203ENST00000428552 IQCA1LA6NCM1 817 aa11.01□□□□□ -0.65
CSTF1-203ENST00000428552 HMOX1P09601 288 aa11.01□□□□□ -0.65
CSTF1-203ENST00000428552 OLFM4Q6UX06 510 aa11.01□□□□□ -0.65
CSTF1-203ENST00000428552 CNKSR1Q969H4 720 aa11.01□□□□□ -0.65
CSTF1-203ENST00000428552 AIDAQ96BJ3 306 aa11.01□□□□□ -0.65
CSTF1-203ENST00000428552 HEG1Q9ULI3 1381 aa11.01□□□□□ -0.65
CSTF1-203ENST00000428552 LTBP1Q14766 1721 aa11.01□□□□□ -0.65
CSTF1-203ENST00000428552 STARD3NLO95772 234 aa11□□□□□ -0.65
CSTF1-203ENST00000428552 IL6STP40189 918 aaPredicted RBP11□□□□□ -0.65
CSTF1-203ENST00000428552 CNBD1Q8NA66 436 aa11□□□□□ -0.65
CSTF1-203ENST00000428552 MASTLQ96GX5 879 aa11□□□□□ -0.65
CSTF1-203ENST00000428552 COL4A5P29400 1685 aa11□□□□□ -0.65
CSTF1-203ENST00000428552 KLRG2A4D1S0 409 aaPredicted RBP10.99□□□□□ -0.65
CSTF1-203ENST00000428552 A1BGP04217 495 aa10.99□□□□□ -0.65
CSTF1-203ENST00000428552 RGS19P49795 217 aa10.99□□□□□ -0.65
CSTF1-203ENST00000428552 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
CSTF1-203ENST00000428552 MAP1SQ66K74 1059 aaPredicted RBP10.99□□□□□ -0.65
CSTF1-203ENST00000428552 IL17REQ8NFR9 667 aa10.99□□□□□ -0.65
CSTF1-203ENST00000428552 WDR33Q9C0J8 1336 aaKnown RBP10.99□□□□□ -0.65
CSTF1-203ENST00000428552 FZD9O00144 591 aa10.98□□□□□ -0.65
CSTF1-203ENST00000428552 EPHX2P34913 555 aa10.98□□□□□ -0.65
CSTF1-203ENST00000428552 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
CSTF1-203ENST00000428552 FMR1Q06787 632 aaKnown RBP eCLIP10.98□□□□□ -0.65
CSTF1-203ENST00000428552 DEFB115Q30KQ5 88 aa10.98□□□□□ -0.65
CSTF1-203ENST00000428552 SOGA3Q5TF21 947 aa10.98□□□□□ -0.65
CSTF1-203ENST00000428552 ZNF790Q6PG37 636 aa10.98□□□□□ -0.65
CSTF1-203ENST00000428552 CNTROBQ8N137 903 aa10.98□□□□□ -0.65
CSTF1-203ENST00000428552 SETDB2Q96T68 719 aa10.98□□□□□ -0.65
CSTF1-203ENST00000428552 ZNF277Q9NRM2 450 aaPredicted RBP10.98□□□□□ -0.65
CSTF1-203ENST00000428552 HACL1Q9UJ83 578 aa10.98□□□□□ -0.65
CSTF1-203ENST00000428552 RNF123Q5XPI4 1314 aa10.98□□□□□ -0.65
CSTF1-203ENST00000428552 CCDC93Q567U6 631 aa10.97□□□□□ -0.65
CSTF1-203ENST00000428552 ZNF330Q9Y3S2 320 aaPredicted RBP10.97□□□□□ -0.65
CSTF1-203ENST00000428552 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
CSTF1-203ENST00000428552 TNRC18O15417 2968 aaPredicted RBP10.97□□□□□ -0.65
CSTF1-203ENST00000428552 CEMIPQ8WUJ3 1361 aa10.96□□□□□ -0.65
CSTF1-203ENST00000428552 KCNQ3O43525 872 aa10.96□□□□□ -0.65
CSTF1-203ENST00000428552 HSPA5P11021 654 aaKnown RBP10.96□□□□□ -0.65
CSTF1-203ENST00000428552 PIP4K2AP48426 406 aaPredicted RBP10.96□□□□□ -0.65
CSTF1-203ENST00000428552 ST5P78524 1137 aa10.96□□□□□ -0.65
CSTF1-203ENST00000428552 TTC5Q8N0Z6 440 aa10.96□□□□□ -0.65
CSTF1-203ENST00000428552 PRAMEF22A3QJZ6 481 aa10.95□□□□□ -0.66
CSTF1-203ENST00000428552 NPR1P16066 1061 aa10.95□□□□□ -0.66
CSTF1-203ENST00000428552 MAP2K1Q02750 393 aaPredicted RBP10.95□□□□□ -0.66
CSTF1-203ENST00000428552 SLC51AQ86UW1 340 aa10.95□□□□□ -0.66
CSTF1-203ENST00000428552 PNMA8AQ86V59 439 aaPredicted RBP10.95□□□□□ -0.66
CSTF1-203ENST00000428552 DZIP3Q86Y13 1208 aaKnown RBP10.95□□□□□ -0.66
CSTF1-203ENST00000428552 TEX13AQ9BXU3 409 aaPredicted RBP10.95□□□□□ -0.66
CSTF1-203ENST00000428552 DDX21Q9NR30 783 aaKnown RBP eCLIP10.95□□□□□ -0.66
CSTF1-203ENST00000428552 CLEC11AQ9Y240 323 aa10.95□□□□□ -0.66
CSTF1-203ENST00000428552 USP16Q9Y5T5 823 aa10.95□□□□□ -0.66
CSTF1-203ENST00000428552 CST9Q5W186 159 aa10.94□□□□□ -0.66
CSTF1-203ENST00000428552 GPC2Q8N158 579 aa10.94□□□□□ -0.66
CSTF1-203ENST00000428552 TIMELESSQ9UNS1 1208 aa10.94□□□□□ -0.66
CSTF1-203ENST00000428552 IARSP41252 1262 aaKnown RBP10.93□□□□□ -0.66
CSTF1-203ENST00000428552 MLLT1Q03111 559 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-203ENST00000428552 CYP4F22Q6NT55 531 aa10.93□□□□□ -0.66
CSTF1-203ENST00000428552 CLEC4GQ6UXB4 293 aa10.93□□□□□ -0.66
CSTF1-203ENST00000428552 NBPF5PQ86XG9 351 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-203ENST00000428552 SYNE4Q8N205 404 aa10.93□□□□□ -0.66
CSTF1-203ENST00000428552 CAPNS2Q96L46 248 aa10.93□□□□□ -0.66
CSTF1-203ENST00000428552 FMNL2Q96PY5 1086 aa10.93□□□□□ -0.66
CSTF1-203ENST00000428552 ABT1Q9ULW3 272 aaKnown RBP10.93□□□□□ -0.66
CSTF1-203ENST00000428552 KNSTRNQ9Y448 316 aa10.93□□□□□ -0.66
CSTF1-203ENST00000428552 CCDC85CA6NKD9 419 aa10.92□□□□□ -0.66
CSTF1-203ENST00000428552 GNAT3A8MTJ3 354 aa10.92□□□□□ -0.66
CSTF1-203ENST00000428552 NBPF26B4DH59 902 aa10.92□□□□□ -0.66
CSTF1-203ENST00000428552 DIAPH1O60610 1272 aaKnown RBP10.92□□□□□ -0.66
CSTF1-203ENST00000428552 SCNN1DP51172 638 aa10.92□□□□□ -0.66
CSTF1-203ENST00000428552 EIF4G2P78344 907 aaKnown RBP eCLIP10.92□□□□□ -0.66
CSTF1-203ENST00000428552 TEFQ10587 303 aa10.92□□□□□ -0.66
CSTF1-203ENST00000428552 NBPF10Q6P3W6 841 aaKnown RBP10.92□□□□□ -0.66
CSTF1-203ENST00000428552 RTKN2Q8IZC4 609 aa10.92□□□□□ -0.66
CSTF1-203ENST00000428552 NBPF15Q8N660 670 aa10.92□□□□□ -0.66
CSTF1-203ENST00000428552 PCDH10Q9P2E7 1040 aa10.92□□□□□ -0.66
CSTF1-203ENST00000428552 TSKSQ9UJT2 592 aa10.92□□□□□ -0.66
CSTF1-203ENST00000428552 TRAF5O00463 557 aa10.91□□□□□ -0.66
CSTF1-203ENST00000428552 NPHP1O15259 732 aa10.91□□□□□ -0.66
CSTF1-203ENST00000428552 PER1O15534 1290 aaPredicted RBP10.91□□□□□ -0.66
CSTF1-203ENST00000428552 AOC2O75106 756 aa10.91□□□□□ -0.66
CSTF1-203ENST00000428552 EPS15P42566 896 aa10.91□□□□□ -0.66
CSTF1-203ENST00000428552 CRY2Q49AN0 593 aa10.91□□□□□ -0.66
CSTF1-203ENST00000428552 GPR101Q96P66 508 aaPredicted RBP10.91□□□□□ -0.66
CSTF1-203ENST00000428552 PSMD1Q99460 953 aa10.91□□□□□ -0.66
CSTF1-203ENST00000428552 TRPM7Q96QT4 1865 aa10.91□□□□□ -0.66
CSTF1-203ENST00000428552 ABCC12Q96J65 1359 aa10.9□□□□□ -0.66
CSTF1-203ENST00000428552 PRKCSHP14314 528 aaPredicted RBP10.9□□□□□ -0.66
CSTF1-203ENST00000428552 HLFQ16534 295 aa10.9□□□□□ -0.66
CSTF1-203ENST00000428552 PHACTR3Q96KR7 559 aa10.9□□□□□ -0.66
CSTF1-203ENST00000428552 TLL2Q9Y6L7 1015 aa10.9□□□□□ -0.66
CSTF1-203ENST00000428552 BTBD11A6QL63 1104 aa10.89□□□□□ -0.67
CSTF1-203ENST00000428552 RGL2O15211 777 aa10.89□□□□□ -0.67
CSTF1-203ENST00000428552 TPTE2Q6XPS3 522 aa10.89□□□□□ -0.67
CSTF1-203ENST00000428552 GAS2L2Q8NHY3 880 aa10.89□□□□□ -0.67
CSTF1-203ENST00000428552 MCOLN1Q9GZU1 580 aa10.89□□□□□ -0.67
CSTF1-203ENST00000428552 NIP7Q9Y221 180 aaKnown RBP eCLIP10.89□□□□□ -0.67
CSTF1-203ENST00000428552 FAM177BA6PVY3 158 aa10.88□□□□□ -0.67
CSTF1-203ENST00000428552 ALDH1B1P30837 517 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms